ID
46153
Description
The implementation of targeted therapies for acute myeloid leukemia has been challenged by complex mutational patterns within and across patients as well as a dearth of pharmacologic agents for most mutational events. Here, we report initial findings from the Beat AML program on a cohort of 672 tumor specimens collected from 562 patients. We assessed these specimens using whole exome sequencing, RNA-sequencing, and ex vivo drug sensitivity analyses. Our data reveal novel mutational events not previously detected in AML. We show association of drug response with mutational status, including instances of drug sensitivity that are specific to combinatorial mutational events. Integration with RNA-sequencing also revealed gene expression signatures, which predict a role of specific gene networks in drug response. Collectively, this report offers a dataset, accessible by the Beat AML data viewer, that can be leveraged to address clinical, genomic, transcriptomic, and functional inquiries into the biology of AML. NCT 01728402 https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001657
Link
Keywords
Versions (9)
- 4/27/22 4/27/22 - Martin Dugas
- 4/27/22 4/27/22 - Martin Dugas
- 4/27/22 4/27/22 - Martin Dugas
- 4/27/22 4/27/22 - Martin Dugas
- 5/12/22 5/12/22 - Martin Dugas
- 5/12/22 5/12/22 - Martin Dugas
- 10/12/22 10/12/22 - Adrian Schulz
- 6/22/23 6/22/23 - Dr. Christian Niklas
- 1/29/25 1/29/25 - Akane Nishihara
Copyright Holder
Jeffrey W. Tyner, PhD. Oregon Health and Science University, Knight Cancer Institute, Portland, OR, USA
Uploaded on
January 29, 2025
DOI
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License
Creative Commons BY 4.0
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dbGaP phs001657 Functional Genomic Landscape of Acute Myeloid Leukemia
Functional Genomic Landscape of Acute Myeloid LeukemiaNCT 01728402dbGaP Study Accession: phs001657.v1
- StudyEvent: dbGaP phs001657 Functional Genomic Landscape of Acute Myeloid Leukemia
Description
Subject ID, sample ID, and sample use variable participants with or without acute myeloid leukemia and involved in the "Functional Genomic Landscape of Acute Myeloid Leukemia" project.
Description
phv00417532
Data type
string
Alias
- UMLS CUI [1,1]
- C2348585 (Clinical Trial Subject Unique Identifier)
Description
phv00417533
Data type
string
Alias
- UMLS CUI [1,1]
- C1299222 (Sample identification number)
- SNOMED
- 372274003
Description
phv00417534
Data type
string
Alias
- UMLS CUI [1,1]
- C2347026 (Biospecimen)
- UMLS CUI [1,2]
- C1524063 (Use of)
- SNOMED
- 260676000
Description
Sample ID, analyte type, and tumor status of samples obtained from participants with or without acute myeloid leukemia and involved in the "Functional Genomic Landscape of Acute Myeloid Leukemia" project.
Description
phv00417535
Data type
string
Alias
- UMLS CUI [1,1]
- C1299222 (Sample identification number)
- SNOMED
- 372274003
- UMLS CUI [1,2]
- C4684638 (De-identified Information)
Description
phv00417536
Data type
string
Alias
- UMLS CUI [1,1]
- C4744818 (Analyte Type)
Description
phv00417537
Data type
text
Alias
- UMLS CUI [1,1]
- C0475752 (Tumor status)
- SNOMED
- 277058005
Similar models
Functional Genomic Landscape of Acute Myeloid LeukemiaNCT 01728402dbGaP Study Accession: phs001657.v1
- StudyEvent: dbGaP phs001657 Functional Genomic Landscape of Acute Myeloid Leukemia
C4684638 (UMLS CUI [1,2])
C1524063 (UMLS CUI [1,2])
C4684638 (UMLS CUI [1,2])
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