ID

44925

Descrizione

The implementation of targeted therapies for acute myeloid leukemia has been challenged by complex mutational patterns within and across patients as well as a dearth of pharmacologic agents for most mutational events. Here, we report initial findings from the Beat AML program on a cohort of 672 tumor specimens collected from 562 patients. We assessed these specimens using whole exome sequencing, RNA-sequencing, and ex vivo drug sensitivity analyses. Our data reveal novel mutational events not previously detected in AML. We show association of drug response with mutational status, including instances of drug sensitivity that are specific to combinatorial mutational events. Integration with RNA-sequencing also revealed gene expression signatures, which predict a role of specific gene networks in drug response. Collectively, this report offers a dataset, accessible by the Beat AML data viewer (www.vizome.org), that can be leveraged to address clinical, genomic, transcriptomic, and functional inquiries into the biology of AML. https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001657.v1.p1

collegamento

www.vizome.org

Keywords

  1. 27/04/22 27/04/22 - Martin Dugas
  2. 27/04/22 27/04/22 - Martin Dugas
  3. 27/04/22 27/04/22 - Martin Dugas
  4. 27/04/22 27/04/22 - Martin Dugas
  5. 12/05/22 12/05/22 - Martin Dugas
  6. 12/05/22 12/05/22 - Martin Dugas
  7. 12/10/22 12/10/22 - Adrian Schulz
  8. 22/06/23 22/06/23 - Dr. Christian Niklas
  9. 29/01/25 29/01/25 - Akane Nishihara
Titolare del copyright

Jeffrey W. Tyner, PhD. Oregon Health and Science University, Knight Cancer Institute, Portland, OR, USA

Caricato su

27 aprile 2022

DOI

Per favore, per richiedere un accesso.

Licenza

Creative Commons BY-NC 4.0

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    Functional Genomic Landscape of Acute Myeloid Leukemia dbGaP Study Accession: phs001657.v1

    pht009393.v1

    1. StudyEvent: SEV1
      1. pht009393.v1
    pht009393.v1
    Descrizione

    pht009393.v1

    De-identified sample ID
    Descrizione

    SAMPLE_ID

    Tipo di dati

    string

    Analyte type
    Descrizione

    ANALYTE_TYPE

    Tipo di dati

    string

    Tumor status
    Descrizione

    IS_TUMOR

    Tipo di dati

    text

    Similar models

    pht009393.v1

    1. StudyEvent: SEV1
      1. pht009393.v1
    Name
    genere
    Description | Question | Decode (Coded Value)
    Tipo di dati
    Alias
    Item Group
    pht009393.v1
    SAMPLE_ID
    Item
    De-identified sample ID
    string
    ANALYTE_TYPE
    Item
    Analyte type
    string
    Item
    Tumor status
    text
    Code List
    Tumor status
    CL Item
    Is normal (N)
    CL Item
    Is tumor (Y)

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