ID

45652

Descripción

Principal Investigator: Richard A. Young, Whitehead Institute for Biomedical Research, Cambridge, MA and Massachusetts Institute of Technology, Cambridge, MA, USA MeSH: Precursor T-Cell Lymphoblastic Leukemia-Lymphoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001242 ChIP-Seq data from 102 cell lines were processed to identify insertions relative to the human reference genome. To confirm the ability of a computational pipeline to identify insertions that are actually present in these genomes, we PCR-amplified and deeply sequenced regions where insertions were predicted to exist in MOLT4 T-cell acute lymphoblastic leukemia cells. The current study release makes available sequences of amplicons from a tumor cell genome (MOLT4) where a computational pipeline predicted small insertions from orthogonal data.

Link

dbGaP study = phs001242

Palabras clave

  1. 21/03/23 21/03/23 - Simon Heim
Titular de derechos de autor

Richard A. Young, Whitehead Institute for Biomedical Research, Cambridge, MA and Massachusetts Institute of Technology, Cambridge, MA, USA

Subido en

21 marzo 2023

DOI

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Licencia

Creative Commons BY 4.0

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dbGaP phs001242 Small genomic insertions form enhancers that misregulate oncogenes

Subject - Consent Information

pht006071
Descripción

pht006071

Alias
UMLS CUI [1,1]
C3846158
Sample ID
Descripción

SUBJECT_ID

Tipo de datos

text

Alias
UMLS CUI [1,1]
C1299222
Consent status
Descripción

CONSENT

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0021430
UMLS CUI [1,2]
C0449438

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Subject - Consent Information

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht006071
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
Sample ID
text
C1299222 (UMLS CUI [1,1])
Item
Consent status
text
C0021430 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
Code List
Consent status
CL Item
General Research Use (GRU) (1)
C0021430 (UMLS CUI [1,1])
C0242481 (UMLS CUI [1,2])

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