ID

40556

Description

COLORECTAL CANCER DATA COLLECTION Version 1.1.2 Revised: November 6th, 2017 http://www.ichom.org/ Notice: This work was conducted using resources from ICHOM, the International Consortium for Health Outcomes Measurement (www.ICHOM.org). The content is solely the responsibility of the authors and does not necessarily represent the official views of ICHOM. Conditions: All patients with newly pathologically diagnosed invasive colorectal cancer (stage I-IV) Excluded Conditions: Non-adenocarcinoma, non-primary colorectal tumors and patients with recurrent disease at baseline will be excluded. Treatment Approaches: Surgery | Radiotherapy | Chemotherapy | Targeted Therapy In this standard set (parts of) the following questionnaires/scores are used: European Organization for Research and Treatment of Cancer Quality of Life Questionnaire (EORTC QLQ-C30): Due to the need for a license, the EORTC QLQ-C30 questions are not included in this version of the standard set. European Organization for Research and Treatment of Cancer Quality of Life Questionnaire (EORTC QLQ-C29): Due to the need for a license, the EORTC QLQ-C29 questions are not included in this version of the standard set. Memorial Sloan-Kettering Cancer Center (MSKCC) Bowel Function Instrument: Only 4 of the items used. According to ICHOM it is free to use for all health care organizations and no license is needed. Temple, L., Bacik, J., Savatta, S. et al. The Development of a Validated Instrument to Evaluate Bowel Function After Sphincter-Preserving Surgery for Rectal Cancer. Dis Colon Rectum (2005) 48: 1353. European Organization for Research and Treatment of Cancer Quality of Life Questionnaire (EORTC QLQ-LMC21): A license is needed for use of this questionnaire as well, however only one question is used. ICHOM was supported by Alliance of Dedicated Cancer Centers (CZ, DICA, Bowel Cancer Australia) for this standard set. Publication: Zerillo JA, Schouwenburg MG, van Bommel ACM, et al. An International Collaborative Standardizing a Comprehensive Patient-Centered Outcomes Measurement Set for Colorectal Cancer. JAMA Oncol. 2017;3(5):686–694. doi:10.1001/jamaoncol.2017.0417 For this version of the standard set, semantic annotation with UMLS CUIs has been added.

Link

http://www.ichom.org/

Keywords

Versions (2)
  1. 9/11/18 9/11/18 - Sarah Riepenhausen
  2. 4/30/20 4/30/20 - Sarah Riepenhausen
Copyright Holder

ICHOM

Uploaded on

April 30, 2020

DOI

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License

Creative Commons BY-NC 4.0
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ICHOM Colorectal Cancer

English

Baseline Clinical Form

1 forms  
Administrative Data
Description

Administrative Data

Alias
UMLS CUI-1
C1320722
Indicate the patient's medical record number
Description

This number will not be shared with ICHOM. In the case patient-level data is submitted to ICHOM for benchmarking or research purposes, a separate ICHOM Patient Identifier will be created and cross-linking between the ICHOM Patient Identifier and the medical record number will only be known at the treating institution INCLUSION CRITERIA: All patients TIMING: On all forms REPORTING SOURCE: Administrative or clinical RESPONSE OPTIONS: According to institution

Data type

integer

Alias
UMLS CUI [1]
C1269815
Patient's last name:
Description

The patients' name will not be shared with ICHOM.  INCLUSION CRITERIA: All patients TIMING: On all forms REPORTING SOURCE: Administrative or clinical

Data type

text

Alias
UMLS CUI [1]
C1299487
Baseline Clinical Factors
Description

Baseline Clinical Factors

Alias
UMLS CUI-1
C0449440
UMLS CUI-2
C1442488
Indicate height in centimeters or inches
Description

Height and weight are used to calculate BMI INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical RESPONSE OPTIONS: Numerical value of height in cm or in

Data type

integer

Alias
UMLS CUI [1]
C0005890
Indicate units of height
Description

INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0005890
UMLS CUI [1,2]
C1519795
Indicate weight in kilograms or pounds
Description

Height and weight are used to calculate BMI INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical RESPONSE OPTION: Numerical value of weight in kg or lbs

Data type

integer

Alias
UMLS CUI [1]
C0005910
Indicate units of weight
Description

INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0005910
UMLS CUI [1,2]
C1519795
Indicate the ECOG/WHO performance status
Description

ECOG/WHO Scale: WHO 0 = normal activity level WHO 1 = restricted with physically strenuous activity WHO 2 = active >/= 50% of day WHO 3 = spends > 50% of day in chair or bed WHO 4 = totally confined to bed or chair INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C1520224
Indicate whether the patient has any evidence of a cognitive disorder (e.g. dementia):
Description

INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C0945985
Presence of germline APC (Adenomatous polyposis coli) gene mutation:
Description

Familial Adenomatosis Polyposis is caused by a germline mutation of the APC gene. INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C4522286
UMLS CUI [1,2]
C0206530
Presence of germline MMR or EPCAM gene mutation: 
Description

Lynch syndrome is caused by a mutation of one of the DNA mismatch repair (MMR) genes or the EPCAM gene. INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C4289650
UMLS CUI [1,2]
C0206530
UMLS CUI [2,1]
C4524837
UMLS CUI [2,2]
C0206530
Any clinical documentation of inflammatory bowel disease diagnosis (including Crohn's disease and Ulcerative colitis):
Description

INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C0021390
Initial date of histological diagnosis
Description

INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical

Data type

date

Measurement units
  • DD/MM/YYYY
Alias
UMLS CUI [1,1]
C0679557
UMLS CUI [1,2]
C0011008
DD/MM/YYYY
Indicate if there is more than one primary tumor
Description

Defined as two or more distinct primary tumors, separated by normal bowel and not due to direct extension or metastasis. Of note: If yes, please collect information on highest TNM stage. INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0449788
UMLS CUI [1,2]
C0677930
Location of tumor:
Description

INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C0872338
Distance from anal verge (in cm)
Description

INCLUSION CRITERIA: All patients with rectal cancer receiving surgery/radiotherapy TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Numerical value; Please enter "999" if distance is unknown.

Data type

integer

Alias
UMLS CUI [1,1]
C0007113
UMLS CUI [1,2]
C1300126
Clinical tumor stage (per AJCC 5th - 7th Ed.)
Description

Only select cT4 if not able to select cT4a or cT4b. INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0441915
UMLS CUI [1,2]
C1275863
Clinical nodal stage (per AJCC 5th - 7th Ed.)
Description

Only select cN1 or cN2 if not able to select cN1a-c or cN2a-b. INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0441915
UMLS CUI [1,2]
C1275865
Clinical distant metastasis (per AJCC 5th - 7th Ed.)
Description

Only select cM1 if not able to select cM1a or cM1b. INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0441915
UMLS CUI [1,2]
C1275856
Histological grade of the tumor:
Description

INCLUSION CRITERIA: If the patient received surgery or biopsy  TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C0919553
Presence of BRAF mutation:
Description

INCLUSION CRITERIA: If the patient received surgery or biopsy  TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C1511021
Presence of RAS mutation:
Description

INCLUSION CRITERIA: If the patient received surgery or biopsy  TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C2747837
Presence of microsatellite instability (MSI) mutation:
Description

INCLUSION CRITERIA: If the patient received surgery or biopsy  TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C0920269
Pathological tumor stage (per AJCC 5th - 7th Ed.)
Description

Only select pT4 if not able to select pT4a or pT4b. INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0441915
UMLS CUI [1,2]
C1270004
Pathological nodal stage (per AJCC 5th - 7th Ed.)
Description

Only select pN1 or pN2 if not able to select pN1a-c or pN2a-b. INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0441915
UMLS CUI [1,2]
C1269796
Pathological distant metastasis (per AJCC 5th - 7th Ed.)
Description

Only select pM1 if not able to select pM1a or pM1b. INCLUSION CRITERIA: If the patient received surgery or biopsy TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0441915
UMLS CUI [1,2]
C1269796
Number of lymph nodes resected: 
Description

INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Numerical value; Please enter "999" if number of resected lymph nodes is unknown.

Data type

integer

Alias
UMLS CUI [1,1]
C0024204
UMLS CUI [1,2]
C0728940
UMLS CUI [1,3]
C0449788
Number of lymph nodes involved:
Description

INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Numerical value; Please enter "999" if number of involved lymph nodes is unknown.

Data type

integer

Alias
UMLS CUI [1,1]
C0806692
UMLS CUI [1,2]
C0449788
Presence of lymphovascular invasion of the tumor: (select all that apply)
Description

INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Multiple answer

Data type

integer

Alias
UMLS CUI [1]
C1708790
Presence of perineural invasion in resected tumor specimen:
Description

INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C1300724
Indicate completeness of surgical excision of the primary tumor according to TNM:
Description

INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1,1]
C0229985
UMLS CUI [1,2]
C0475286
Baseline Treatment Factors
Description

Baseline Treatment Factors

Urgency of the procedure  
Description

INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C4049774
Presence of perforation of the bowel at the site of the tumor:
Description

INCLUSION CRITERIA: If the patient received surgery TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C0151664
Indicate intent of treatment:
Description

INCLUSION CRITERIA: All patients TIMING: Baseline REPORTING SOURCE: Clinical TYPE: Single answer

Data type

integer

Alias
UMLS CUI [1]
C1292734
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Similar models

Baseline Clinical Form

1 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Administrative Data
C1320722 (UMLS CUI-1)
Patient ID
Item
Indicate the patient's medical record number
integer
C1269815 (UMLS CUI [1])
Patient's last name
Item
Patient's last name:
text
C1299487 (UMLS CUI [1])
Item Group
Baseline Clinical Factors
C0449440 (UMLS CUI-1)
C1442488 (UMLS CUI-2)
Height
Item
Indicate height in centimeters or inches
integer
C0005890 (UMLS CUI [1])
Item
Indicate units of height
integer
C0005890 (UMLS CUI [1,1])
C1519795 (UMLS CUI [1,2])
Height units
Code List
Indicate units of height
CL Item
centimeters (1)
C0475210 (UMLS CUI-1)
(Comment:en)
CL Item
inches (2)
C0439204 (UMLS CUI-1)
(Comment:en)
Weight
Item
Indicate weight in kilograms or pounds
integer
C0005910 (UMLS CUI [1])
Item
Indicate units of weight
integer
C0005910 (UMLS CUI [1,1])
C1519795 (UMLS CUI [1,2])
Weight units
Code List
Indicate units of weight
CL Item
kilograms (1)
C0439209 (UMLS CUI-1)
(Comment:en)
CL Item
pounds (2)
C0439219 (UMLS CUI-2)
(Comment:en)
Item
Indicate the ECOG/WHO performance status
integer
C1520224 (UMLS CUI [1])
Weight units
Code List
Indicate the ECOG/WHO performance status
CL Item
1 (1)
C3830345 (UMLS CUI-1)
(Comment:en)
CL Item
2 (2)
C3830344 (UMLS CUI-1)
(Comment:en)
CL Item
0  (0)
C3830346 (UMLS CUI-1)
(Comment:en)
CL Item
3 (3)
C3830343 (UMLS CUI-1)
(Comment:en)
CL Item
4 (4)
C3830342 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C1520224 (UMLS CUI-1)
C0439673 (UMLS CUI-2)
(Comment:en)
Item
Indicate whether the patient has any evidence of a cognitive disorder (e.g. dementia):
integer
C0945985 (UMLS CUI [1])
Weight units
Code List
Indicate whether the patient has any evidence of a cognitive disorder (e.g. dementia):
CL Item
Yes  (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
No  (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Presence of germline APC (Adenomatous polyposis coli) gene mutation:
integer
C4522286 (UMLS CUI [1,1])
C0206530 (UMLS CUI [1,2])
Weight units
Code List
Presence of germline APC (Adenomatous polyposis coli) gene mutation:
CL Item
Yes  (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
No  (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Presence of germline MMR or EPCAM gene mutation: 
integer
C4289650 (UMLS CUI [1,1])
C0206530 (UMLS CUI [1,2])
C4524837 (UMLS CUI [2,1])
C0206530 (UMLS CUI [2,2])
Weight units
Code List
Presence of germline MMR or EPCAM gene mutation: 
CL Item
Yes  (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
No  (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Any clinical documentation of inflammatory bowel disease diagnosis (including Crohn's disease and Ulcerative colitis):
integer
C0021390 (UMLS CUI [1])
Weight units
Code List
Any clinical documentation of inflammatory bowel disease diagnosis (including Crohn's disease and Ulcerative colitis):
CL Item
Yes  (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
No  (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Histological diagnosis
Item
Initial date of histological diagnosis
date
C0679557 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
Item
Indicate if there is more than one primary tumor
integer
C0449788 (UMLS CUI [1,1])
C0677930 (UMLS CUI [1,2])
Weight units
Code List
Indicate if there is more than one primary tumor
CL Item
Yes  (1)
CL Item
No  (0)
CL Item
Unknown (999)
Item
Location of tumor:
integer
C0872338 (UMLS CUI [1])
Weight units
Code List
Location of tumor:
CL Item
Appendix (1)
C0003617 (UMLS CUI-1)
(Comment:en)
CL Item
Caecum (0)
C0007531 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
CL Item
Ascending colon (2)
C0227375 (UMLS CUI-1)
(Comment:en)
CL Item
Hepatic flexure (3)
C0227385 (UMLS CUI-1)
(Comment:en)
CL Item
Transverse colon (4)
C0227386 (UMLS CUI-1)
(Comment:en)
CL Item
Splenic flexure (5)
C0227387 (UMLS CUI-1)
(Comment:en)
CL Item
Descending colon (6)
C0227389 (UMLS CUI-1)
(Comment:en)
CL Item
Sigmoid colon (7)
C0227391 (UMLS CUI-1)
(Comment:en)
CL Item
Rectum (8)
C0034896 (UMLS CUI-1)
(Comment:en)
Location of rectum tumor
Item
Distance from anal verge (in cm)
integer
C0007113 (UMLS CUI [1,1])
C1300126 (UMLS CUI [1,2])
Item
Clinical tumor stage (per AJCC 5th - 7th Ed.)
integer
C0441915 (UMLS CUI [1,1])
C1275863 (UMLS CUI [1,2])
Clinical tumor stage
Code List
Clinical tumor stage (per AJCC 5th - 7th Ed.)
CL Item
cTX (0)
C0332377 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
cTis (1)
C0475413 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
cT1 (2)
C0475372 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
cT2 (3)
C0475373 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
cT3 (4)
C0475374 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
cT4  (5)
C0475751 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
cT4a (6)
C0475395 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
cT4b (7)
C0475396 (UMLS CUI-1)
C1275863 (UMLS CUI-2)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
C1300072 (UMLS CUI-2)
(Comment:en)
Item
Clinical nodal stage (per AJCC 5th - 7th Ed.)
integer
C0441915 (UMLS CUI [1,1])
C1275865 (UMLS CUI [1,2])
Clinical tumor stage
Code List
Clinical nodal stage (per AJCC 5th - 7th Ed.)
CL Item
cNX (0)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN0 (1)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN1 (2)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN2 (3)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN1a (4)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN1b (5)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN1c (6)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN2a (7)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C1275865 (UMLS CUI-1)
(Comment:en)
CL Item
cN2b (8)
C1275865 (UMLS CUI-1)
(Comment:en)
Item
Clinical distant metastasis (per AJCC 5th - 7th Ed.)
integer
C0441915 (UMLS CUI [1,1])
C1275856 (UMLS CUI [1,2])
Clinical tumor stage
Code List
Clinical distant metastasis (per AJCC 5th - 7th Ed.)
CL Item
cMX (0)
C1275856 (UMLS CUI-1)
(Comment:en)
CL Item
cM0 (1)
C1275856 (UMLS CUI-1)
(Comment:en)
CL Item
cM1 (2)
C1275856 (UMLS CUI-1)
(Comment:en)
CL Item
cM1a (3)
C1275856 (UMLS CUI-1)
(Comment:en)
CL Item
cM1b (4)
C1275856 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C1275856 (UMLS CUI-1)
(Comment:en)
Item
Histological grade of the tumor:
integer
C0919553 (UMLS CUI [1])
Clinical tumor stage
Code List
Histological grade of the tumor:
CL Item
Well or moderate (0)
C0205615 (UMLS CUI-1)
C0205616 (UMLS CUI-2)
(Comment:en)
CL Item
Poor or undifferentiated (1)
C0205618 (UMLS CUI-1)
C0205617 (UMLS CUI-2)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Presence of BRAF mutation:
integer
C1511021 (UMLS CUI [1])
Clinical tumor stage
Code List
Presence of BRAF mutation:
CL Item
No (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
CL Item
Not tested (2)
C3640292 (UMLS CUI-1)
(Comment:en)
Item
Presence of RAS mutation:
integer
C2747837 (UMLS CUI [1])
Clinical tumor stage
Code List
Presence of RAS mutation:
CL Item
No (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Yes (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
CL Item
Not tested (2)
C3640292 (UMLS CUI-1)
(Comment:en)
Item
Presence of microsatellite instability (MSI) mutation:
integer
C0920269 (UMLS CUI [1])
Clinical tumor stage
Code List
Presence of microsatellite instability (MSI) mutation:
CL Item
No (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Yes, MSI-low (1)
C1705108 (UMLS CUI-1)
C1518003 (UMLS CUI-2)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
CL Item
Yes, MSI-high (2)
C1705108 (UMLS CUI-1)
C1512430 (UMLS CUI-2)
(Comment:en)
Item
Pathological tumor stage (per AJCC 5th - 7th Ed.)
integer
C0441915 (UMLS CUI [1,1])
C1270004 (UMLS CUI [1,2])
Clinical tumor stage
Code List
Pathological tumor stage (per AJCC 5th - 7th Ed.)
CL Item
pTX (0)
C0332395 (UMLS CUI-1)
(Comment:en)
CL Item
pT0 (1)
C0332390 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C1270004 (UMLS CUI-1)
C0439673 (UMLS CUI-2)
(Comment:en)
CL Item
pTis (2)
C0332389 (UMLS CUI-1)
(Comment:en)
CL Item
pT1 (3)
C0332391 (UMLS CUI-1)
(Comment:en)
CL Item
pT2 (4)
C0332392 (UMLS CUI-1)
(Comment:en)
CL Item
pT3 (5)
C0332393 (UMLS CUI-1)
(Comment:en)
CL Item
pT4 (6)
C0332394 (UMLS CUI-1)
(Comment:en)
CL Item
pT4a (7)
C2732247 (UMLS CUI-1)
(Comment:en)
CL Item
pT4b (8)
C2732386 (UMLS CUI-1)
(Comment:en)
Item
Pathological nodal stage (per AJCC 5th - 7th Ed.)
integer
C0441915 (UMLS CUI [1,1])
C1269796 (UMLS CUI [1,2])
Clinical tumor stage
Code List
Pathological nodal stage (per AJCC 5th - 7th Ed.)
CL Item
pNX (0)
C0332401 (UMLS CUI-1)
(Comment:en)
CL Item
pN0 (1)
C1269796 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C1269796 (UMLS CUI-1)
C0439673 (UMLS CUI-2)
(Comment:en)
CL Item
pN1 (2)
C0332397 (UMLS CUI-1)
(Comment:en)
CL Item
pN1a (3)
C2733303 (UMLS CUI-1)
(Comment:en)
CL Item
pN1b (4)
C2733304 (UMLS CUI-1)
(Comment:en)
CL Item
pN1c (5)
C2733416 (UMLS CUI-1)
(Comment:en)
CL Item
pN2 (6)
C0332398 (UMLS CUI-1)
(Comment:en)
CL Item
pN2a (7)
C2733134 (UMLS CUI-1)
(Comment:en)
CL Item
pN2b (8)
C2733178 (UMLS CUI-1)
(Comment:en)
Item
Pathological distant metastasis (per AJCC 5th - 7th Ed.)
integer
C0441915 (UMLS CUI [1,1])
C1269796 (UMLS CUI [1,2])
Clinical tumor stage
Code List
Pathological distant metastasis (per AJCC 5th - 7th Ed.)
CL Item
pMx (0)
C1269798 (UMLS CUI-1)
(Comment:en)
CL Item
pM0 (1)
C0332402 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C1269798 (UMLS CUI-1)
C0439673 (UMLS CUI-2)
(Comment:en)
CL Item
pM1 (2)
C0456957 (UMLS CUI-1)
(Comment:en)
CL Item
pM1a (3)
C2733084 (UMLS CUI-1)
(Comment:en)
CL Item
pM1b (4)
C2733110 (UMLS CUI-1)
(Comment:en)
Lymph nodes resected
Item
Number of lymph nodes resected: 
integer
C0024204 (UMLS CUI [1,1])
C0728940 (UMLS CUI [1,2])
C0449788 (UMLS CUI [1,3])
Lymph nodes involved
Item
Number of lymph nodes involved:
integer
C0806692 (UMLS CUI [1,1])
C0449788 (UMLS CUI [1,2])
Item
Presence of lymphovascular invasion of the tumor: (select all that apply)
integer
C1708790 (UMLS CUI [1])
Lymphovascular invasion
Code List
Presence of lymphovascular invasion of the tumor: (select all that apply)
CL Item
Not detected (0)
C1708790 (UMLS CUI-1)
C0559229 (UMLS CUI-2)
C1264755 (UMLS CUI-3)
(Comment:en)
CL Item
Extramural venous invasion (1)
C1269948 (UMLS CUI-1)
(Comment:en)
CL Item
Lymph invasion (2)
C1272791 (UMLS CUI-1)
(Comment:en)
CL Item
Intramural venous invasion (3)
C1269947 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Presence of perineural invasion in resected tumor specimen:
integer
C1300724 (UMLS CUI [1])
Weight units
Code List
Presence of perineural invasion in resected tumor specimen:
CL Item
Yes  (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
No  (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Indicate completeness of surgical excision of the primary tumor according to TNM:
integer
C0229985 (UMLS CUI [1,1])
C0475286 (UMLS CUI [1,2])
Lymphovascular invasion
Code List
Indicate completeness of surgical excision of the primary tumor according to TNM:
CL Item
R0 - complete resection with all margins histologically uninvolved (0)
C0475288 (UMLS CUI-1)
(Comment:en)
CL Item
R1 - microscopic surgical resection margin involvement (1)
C0475825 (UMLS CUI-1)
(Comment:en)
CL Item
unknown (999)
C0439673 (UMLS CUI-1)
C0475286 (UMLS CUI-2)
(Comment:en)
CL Item
R2 - macroscopic residual tumor (2)
C0475826 (UMLS CUI-1)
(Comment:en)
Item Group
Baseline Treatment Factors
Item
Urgency of the procedure  
integer
C4049774 (UMLS CUI [1])
Urgency of procedure
Code List
Urgency of the procedure  
CL Item
Elective (operation at a time to suit both patient and surgeon e.g. after an elective admission) (0)
C0206058 (UMLS CUI-1)
(Comment:en)
CL Item
Scheduled (an early operation but not immediately life-saving. Operation usually within 3 weeks ) (1)
C0543467 (UMLS CUI-1)
C0205539 (UMLS CUI-2)
(Comment:en)
CL Item
Urgent (As soon as possible after resuscitation and usually within 24 hours) (2)
C0543467 (UMLS CUI-1)
C3272275 (UMLS CUI-2)
(Comment:en)
CL Item
Emergency (Immediate and life-saving operation, resuscitation simultaneous with surgical treatment) (3)
C4264510 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Presence of perforation of the bowel at the site of the tumor:
integer
C0151664 (UMLS CUI [1])
Weight units
Code List
Presence of perforation of the bowel at the site of the tumor:
CL Item
Yes  (1)
C1705108 (UMLS CUI-1)
(Comment:en)
CL Item
No  (0)
C1298908 (UMLS CUI-1)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
Item
Indicate intent of treatment:
integer
C1292734 (UMLS CUI [1])
Urgency of procedure
Code List
Indicate intent of treatment:
CL Item
Curative (0)
C1276305 (UMLS CUI-1)
(Comment:en)
CL Item
Curative - gross resection of stage IV disease  (1)
C1276305 (UMLS CUI-1)
C1706406 (UMLS CUI-2)
(Comment:en)
CL Item
Unknown (999)
C0439673 (UMLS CUI-1)
(Comment:en)
CL Item
Palliative due to metastasis (2)
C1285530 (UMLS CUI-1)
C0027627 (UMLS CUI-2)
(Comment:en)
CL Item
Palliative due to invasion (3)
C1710625 (UMLS CUI-1)
C1269793 (UMLS CUI-2)
(Comment:en)
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