ID
38327
Beschreibung
With permission from the DZHK administrative office. http://dzhk.de The DZHK (Deutsches Zentrum für Herz-Kreislauf-Forschung e.V.; German Center for Cardiovascular Research) is a joint cooperation of twenty-eight institutions in seven locations throughout Germany to develop a common research strategy. They developed a data catalogue with metadata and data as well as information about available biological materials from all their studies. For more information on the data catalogue and access to actual data and biosamples please visit https://dzhk.de/en/resources/data-manual/ . This version contains the metadata part only. The form Biobanking Basic Set is used to document the quality of samples of the Basic Set. The Basic Set consists of EDTA plasma, serum, citrate plasma, buffy coat and urine. The documentation is to be performed according to the DZHK's Biobanking SOPs, which can be accessed at https://dzhk.de/en/resources/sops/ (or https://dzhk.de/ressourcen/sops/ for the German language versions). The SOPs for this form are "Collection of Biomaterials from Blood and Urine" (version 1.1, valid as of 15/12/2014) and "Biomaterial Processing Basic Set" (version 1.1, valid as of 15/12/2014) for the English language versions, and "Gewinnung von Biomaterialien aus Blut und Urin" (version 1.1, valid as of 15/12/2014) and "Biomaterialverarbeitung Basis-Set" (versin 1.1, valid as of 15/12/2014) for the German language version. The collection of biomaterials is carried out in accordance with local regulations. Deviations from the following requirements will not result in the exclusion of the patient/test subject from the study. Collection of blood: Appropriate means of disposal for needles, swabs, etc. Period of rest in unaltered body position prior to blood collection: 5 minutes. Site of collection on patient/test subject: cubital vein. Tourniquet time < 1 minute. Specimens should be drawn in the following order: serum, citrate, EDTA. The tourniquet should be released once collection of blood has begun, i.e. when blood flow into the primary receptacle is visible. No repeat clenching of the fist. Invert immediately while exchanging the primary receptacles. Store the primary receptacles vertically in the primary receptacle/tube rack. Collection of urine: Label the urine cup using the sticker intended for that purpose. Inform the patient/test subject using the information sheet “Collecting a Mid-Stream UrineSpecimen”. Spontaneous urine collection. Immediately after urine specimen is given: document the time the urine specimen was collected and the appearance of the urine on the Biomaterial Collection Form. If patient/test subject is actively menstruating: Make a note of this on the Biomaterial Collection Form.
Link
Stichworte
Versionen (2)
- 07.10.19 07.10.19 -
- 10.10.19 10.10.19 - Sarah Riepenhausen
Rechteinhaber
DZHK
Hochgeladen am
10. Oktober 2019
DOI
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Lizenz
Creative Commons BY-NC 3.0
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DZHK Data Catalogue
Biobanking Basic Set
- StudyEvent: ODM
Beschreibung
Blood and Urine collection
Alias
- UMLS CUI-1
- C0005834
- UMLS CUI-2
- C0200354
Beschreibung
Blood collected
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0005834
- UMLS CUI [1,2]
- C0449416
Beschreibung
Position during blood collection
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0005834
- UMLS CUI [1,2]
- C1262869
Beschreibung
How long was the patient/subject in this position prior to blood collection? in min
Datentyp
integer
Maßeinheiten
- min
Alias
- UMLS CUI [1,1]
- C0449238
- UMLS CUI [1,2]
- C1262869
- UMLS CUI [1,3]
- C0332152
- UMLS CUI [1,4]
- C0005834
Beschreibung
Duration of position prior to blood collection
Datentyp
boolean
Alias
- UMLS CUI [1,1]
- C0449238
- UMLS CUI [1,2]
- C1262869
- UMLS CUI [1,3]
- C0332152
- UMLS CUI [1,4]
- C0005834
Beschreibung
Time interval since last food intake
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0449238
- UMLS CUI [1,2]
- C0687676
- UMLS CUI [1,3]
- C0578574
Beschreibung
Total number of hours, if known
Datentyp
integer
Maßeinheiten
- hours
Alias
- UMLS CUI [1,1]
- C0449238
- UMLS CUI [1,2]
- C0687676
- UMLS CUI [1,3]
- C0578574
Beschreibung
Parenteral nutrition
Datentyp
text
Alias
- UMLS CUI [1]
- C0030547
Beschreibung
For women: Menstruating at time of urine collection
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0025344
- UMLS CUI [1,2]
- C0347984
- UMLS CUI [1,3]
- C0200354
Beschreibung
Process steps
Alias
- UMLS CUI-1
- C0022885
- UMLS CUI-2
- C1261552
Beschreibung
Date/Time of blood collection
Datentyp
datetime
Alias
- UMLS CUI [1,1]
- C0005834
- UMLS CUI [1,2]
- C1264639
Beschreibung
Time of urine collection(clinic).
Datentyp
datetime
Alias
- UMLS CUI [1,1]
- C1264639
- UMLS CUI [1,2]
- C0200354
Beschreibung
The primary receptacles along with the Biomaterial Collection Form and the aliquot tubes (rack) should be transported to the laboratory, if possible, within 60 minutes after collection of the biomaterial.
Datentyp
datetime
Alias
- UMLS CUI [1,1]
- C1264639
- UMLS CUI [1,2]
- C3873589
Beschreibung
Only if time of receipt of urine differs from blood, complete for urine
Datentyp
datetime
Alias
- UMLS CUI [1,1]
- C1264639
- UMLS CUI [1,2]
- C3873589
- UMLS CUI [1,3]
- C1610733
Beschreibung
Centrifuge the primary receptacles at 2,000 g for 10 minutes OR 3,000 g for 5 minutes; refrigerated centrifuges: set temperature to 18°C; non-refrigerated centrifuges: allow centrifuge to cool down after each run. End of centrifugation; date, if different from time of receipt at the laboratory, otherwise, Timestamp with hour and minute
Datentyp
partialDatetime
Alias
- UMLS CUI [1,1]
- C3899266
- UMLS CUI [1,2]
- C0200364
Beschreibung
If time of receipt of urine differs from blood, please complete for urine: Timestamp with hour and minute
Datentyp
partialDatetime
Alias
- UMLS CUI [1,1]
- C3899266
- UMLS CUI [1,2]
- C0200364
- UMLS CUI [1,3]
- C1610733
Beschreibung
Time of freezing of all aliquots at -80°C or lower (Serum, EDTA plasma, Citrate plasma, Urine, Buffy Coat).
Datentyp
datetime
Alias
- UMLS CUI [1,1]
- C1264639
- UMLS CUI [1,2]
- C0200367
Beschreibung
Sample properties (blood)
Alias
- UMLS CUI-1
- C0178913
- UMLS CUI-2
- C0871161
Beschreibung
Is the sample normal?
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0178913
- UMLS CUI [1,2]
- C0205307
Beschreibung
Is the sample lipaemic?
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0178913
- UMLS CUI [1,2]
- C0460077
Beschreibung
Is the sample icteric?
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0178913
- UMLS CUI [1,2]
- C0460078
Beschreibung
Is the sample haemolytic?
Datentyp
text
Alias
- UMLS CUI [1,1]
- C0178913
- UMLS CUI [1,2]
- C0312853
Beschreibung
Sample properties (urine)
Alias
- UMLS CUI-1
- C0871161
- UMLS CUI-2
- C1610733
Beschreibung
Is the sample normal?
Datentyp
text
Alias
- UMLS CUI [1,1]
- C1610733
- UMLS CUI [1,2]
- C0205307
Beschreibung
Is the sample cloudy?
Datentyp
text
Alias
- UMLS CUI [1,1]
- C1610733
- UMLS CUI [1,2]
- C0278034
Beschreibung
Is the sample bloody?
Datentyp
text
Alias
- UMLS CUI [1,1]
- C1610733
- UMLS CUI [1,2]
- C0333275
Beschreibung
Commentaries
Alias
- UMLS CUI-1
- C0947611
Ähnliche Modelle
Biobanking Basic Set
- StudyEvent: ODM
C1561954 (UMLS CUI-2)
C0750480 (UMLS CUI-3)
C1292516 (UMLS CUI [1,2])
C3872626 (UMLS CUI [1,2])
C3872791 (UMLS CUI [1,2])
C0489902 (UMLS CUI [1,2])
C1561954 (UMLS CUI [1,2])
C2936475 (UMLS CUI [1,3])
C0200354 (UMLS CUI-2)
C1262869 (UMLS CUI [1,2])
C1262869 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C0005834 (UMLS CUI [1,4])
C1262869 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C0005834 (UMLS CUI [1,4])
C0687676 (UMLS CUI [1,2])
C0578574 (UMLS CUI [1,3])
C0687676 (UMLS CUI [1,2])
C0578574 (UMLS CUI [1,3])
C0347984 (UMLS CUI [1,2])
C0200354 (UMLS CUI [1,3])
C1264639 (UMLS CUI [1,2])
C0200354 (UMLS CUI [1,2])
C3873589 (UMLS CUI [1,2])
C3873589 (UMLS CUI [1,2])
C1610733 (UMLS CUI [1,3])
C0200364 (UMLS CUI [1,2])
C0200364 (UMLS CUI [1,2])
C1610733 (UMLS CUI [1,3])
C0200367 (UMLS CUI [1,2])
C0871161 (UMLS CUI-2)
C1610733 (UMLS CUI-2)
C0947611 (UMLS CUI [1,2])