ID

14962

Beschrijving

This protocol uses two-step serologic testing of serum to determine the presence of antihuman recombinant tissue transglutaminase (TTG) and endomysial antibody (EMA). When both tests are positive, the subject is notified that they are positive for celiac sprue. The test is most accurate if patients have not been on a gluten-free diet in the weeks leading up to the assay, as a gluten-free diet may cause the serologic assays to normalize in many patients. ODM derived from: https://cde.nlm.nih.gov Primary source: https://www.phenxtoolkit.org/ Recent publication: Hendershot, T., Pan, H., Haines, J., Harlan, W.R., Marazita, M.L., McCarty, C.A., Ramos, E.M., and Hamilton, C.M. (2015) Using the PhenX toolkit to add standard measures to a study. Curr. Protoc. Hum. Genet. 86:1.21.1-1.21.17. doi: 10.1002/0471142905.hg0121s86 Permission to publish granted by Carol M. Hamilton.

Link

https://cde.nlm.nih.gov

Trefwoorden

Versies (1)
  1. 27-09-17 27-09-17 -
Geüploaded op

27 september 2017

DOI

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Licentie

Creative Commons BY-NC 3.0
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Celiac Sprue Assay Protocol PhenX Toolkit

Engels

Celiac Sprue Assay Protocol PhenX Toolkit

1 Formulieren  
PhenX - celiac sprue assay protocol
Beschrijving

PhenX - celiac sprue assay protocol

Alias
UMLS CUI-1
C3171948
Do you have hemophilia?
Beschrijving

hemophilia

Datatype

integer

Alias
UMLS CUI [1]
C0684275
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
Beschrijving

chemotherapy

Datatype

integer

Alias
UMLS CUI [1,1]
C0392920
UMLS CUI [1,2]
C0392920
UMLS CUI [1,3]
C1301732
Exclusion Criteria
Beschrijving

exclusion criteria

Datatype

text

Alias
UMLS CUI [1]
C0680251
Was blood drawn?
Beschrijving

blood drawn done

Datatype

boolean

Alias
UMLS CUI [1]
C3166519
Was full sample obtained?
Beschrijving

full sample obtained

Datatype

boolean

Alias
UMLS CUI [1]
C3176022
Service comment
Beschrijving

service comment

Datatype

text

Alias
UMLS CUI [1]
C0485795
Service comment
Beschrijving

service comment

Datatype

text

Alias
UMLS CUI [1]
C0485795
Make of the equipment used to perform...
Beschrijving

make of the equipment used

Datatype

text

Alias
UMLS CUI [1]
C3176779
Manufacturer of the equipment used to perform...
Beschrijving

manufacturer of equipment used

Datatype

text

Alias
UMLS CUI [1]
C3176781
Repeatability of the assay
Beschrijving

repeatability of the assay

Datatype

float

Alias
UMLS CUI [1]
C3166274
Coefficient of variation for the assay
Beschrijving

coefficient of variation

Datatype

float

Alias
UMLS CUI [1]
C3176770
Make of the equipment used to perform...
Beschrijving

make of equipment used

Datatype

text

Alias
UMLS CUI [1]
C3176779
Manufacturer of the equipment used to perform...
Beschrijving

manufacturer of equipment used

Datatype

text

Alias
UMLS CUI [1]
C3176781
Repeatability of the assay
Beschrijving

repeatability of the assay

Datatype

float

Alias
UMLS CUI [1]
C3166274
Coefficient of variation for the assay
Beschrijving

coefficient of variation

Datatype

float

Alias
UMLS CUI [1]
C3176770
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Similar models

Celiac Sprue Assay Protocol PhenX Toolkit

1 Formulieren
Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
PhenX - celiac sprue assay protocol
C3171948 (UMLS CUI-1)
Item
Do you have hemophilia?
integer
C0684275 (UMLS CUI [1])
hemophilia
Code List
Do you have hemophilia?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Refused (3)
CL Item
Don´t know (4)
Item
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
integer
C0392920 (UMLS CUI [1,1])
C0392920 (UMLS CUI [1,2])
C1301732 (UMLS CUI [1,3])
chemotherapy
Code List
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Refused (3)
CL Item
Don´t know (4)
Item
Exclusion Criteria
text
C0680251 (UMLS CUI [1])
exclusion criteria
Code List
Exclusion Criteria
CL Item
Hemophilia (1)
CL Item
Received cancer chemotherapy in the last 3 weeks (2)
CL Item
None – proceed with blood draw (3)
blood drawn done
Item
Was blood drawn?
boolean
C3166519 (UMLS CUI [1])
full sample obtained
Item
Was full sample obtained?
boolean
C3176022 (UMLS CUI [1])
service comment
Item
Service comment
text
C0485795 (UMLS CUI [1])
service comment
Item
Service comment
text
C0485795 (UMLS CUI [1])
make of the equipment used
Item
Make of the equipment used to perform...
text
C3176779 (UMLS CUI [1])
manufacturer of equipment used
Item
Manufacturer of the equipment used to perform...
text
C3176781 (UMLS CUI [1])
repeatability of the assay
Item
Repeatability of the assay
float
C3166274 (UMLS CUI [1])
coefficient of variation
Item
Coefficient of variation for the assay
float
C3176770 (UMLS CUI [1])
make of equipment used
Item
Make of the equipment used to perform...
text
C3176779 (UMLS CUI [1])
manufacturer of equipment used
Item
Manufacturer of the equipment used to perform...
text
C3176781 (UMLS CUI [1])
repeatability of the assay
Item
Repeatability of the assay
float
C3166274 (UMLS CUI [1])
coefficient of variation
Item
Coefficient of variation for the assay
float
C3176770 (UMLS CUI [1])
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