ID

14962

Descrizione

This protocol uses two-step serologic testing of serum to determine the presence of antihuman recombinant tissue transglutaminase (TTG) and endomysial antibody (EMA). When both tests are positive, the subject is notified that they are positive for celiac sprue. The test is most accurate if patients have not been on a gluten-free diet in the weeks leading up to the assay, as a gluten-free diet may cause the serologic assays to normalize in many patients. ODM derived from: https://cde.nlm.nih.gov Primary source: https://www.phenxtoolkit.org/ Recent publication: Hendershot, T., Pan, H., Haines, J., Harlan, W.R., Marazita, M.L., McCarty, C.A., Ramos, E.M., and Hamilton, C.M. (2015) Using the PhenX toolkit to add standard measures to a study. Curr. Protoc. Hum. Genet. 86:1.21.1-1.21.17. doi: 10.1002/0471142905.hg0121s86 Permission to publish granted by Carol M. Hamilton.

collegamento

https://cde.nlm.nih.gov

Keywords

versioni (1)
  1. 27/09/17 27/09/17 -
Caricato su

27 settembre 2017

DOI

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Licenza

Creative Commons BY-NC 3.0
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Celiac Sprue Assay Protocol PhenX Toolkit

Inglese

Celiac Sprue Assay Protocol PhenX Toolkit

1 moduli  
PhenX - celiac sprue assay protocol
Descrizione

PhenX - celiac sprue assay protocol

Alias
UMLS CUI-1
C3171948
Do you have hemophilia?
Descrizione

hemophilia

Tipo di dati

integer

Alias
UMLS CUI [1]
C0684275
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
Descrizione

chemotherapy

Tipo di dati

integer

Alias
UMLS CUI [1,1]
C0392920
UMLS CUI [1,2]
C0392920
UMLS CUI [1,3]
C1301732
Exclusion Criteria
Descrizione

exclusion criteria

Tipo di dati

text

Alias
UMLS CUI [1]
C0680251
Was blood drawn?
Descrizione

blood drawn done

Tipo di dati

boolean

Alias
UMLS CUI [1]
C3166519
Was full sample obtained?
Descrizione

full sample obtained

Tipo di dati

boolean

Alias
UMLS CUI [1]
C3176022
Service comment
Descrizione

service comment

Tipo di dati

text

Alias
UMLS CUI [1]
C0485795
Service comment
Descrizione

service comment

Tipo di dati

text

Alias
UMLS CUI [1]
C0485795
Make of the equipment used to perform...
Descrizione

make of the equipment used

Tipo di dati

text

Alias
UMLS CUI [1]
C3176779
Manufacturer of the equipment used to perform...
Descrizione

manufacturer of equipment used

Tipo di dati

text

Alias
UMLS CUI [1]
C3176781
Repeatability of the assay
Descrizione

repeatability of the assay

Tipo di dati

float

Alias
UMLS CUI [1]
C3166274
Coefficient of variation for the assay
Descrizione

coefficient of variation

Tipo di dati

float

Alias
UMLS CUI [1]
C3176770
Make of the equipment used to perform...
Descrizione

make of equipment used

Tipo di dati

text

Alias
UMLS CUI [1]
C3176779
Manufacturer of the equipment used to perform...
Descrizione

manufacturer of equipment used

Tipo di dati

text

Alias
UMLS CUI [1]
C3176781
Repeatability of the assay
Descrizione

repeatability of the assay

Tipo di dati

float

Alias
UMLS CUI [1]
C3166274
Coefficient of variation for the assay
Descrizione

coefficient of variation

Tipo di dati

float

Alias
UMLS CUI [1]
C3176770
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Similar models

Celiac Sprue Assay Protocol PhenX Toolkit

1 moduli
Name
genere
Description | Question | Decode (Coded Value)
Tipo di dati
Alias
Item Group
PhenX - celiac sprue assay protocol
C3171948 (UMLS CUI-1)
Item
Do you have hemophilia?
integer
C0684275 (UMLS CUI [1])
hemophilia
Code List
Do you have hemophilia?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Refused (3)
CL Item
Don´t know (4)
Item
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
integer
C0392920 (UMLS CUI [1,1])
C0392920 (UMLS CUI [1,2])
C1301732 (UMLS CUI [1,3])
chemotherapy
Code List
Have you received cancer chemotherapy in the past four weeks or do you anticipate such therapy in the next four weeks?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Refused (3)
CL Item
Don´t know (4)
Item
Exclusion Criteria
text
C0680251 (UMLS CUI [1])
exclusion criteria
Code List
Exclusion Criteria
CL Item
Hemophilia (1)
CL Item
Received cancer chemotherapy in the last 3 weeks (2)
CL Item
None – proceed with blood draw (3)
blood drawn done
Item
Was blood drawn?
boolean
C3166519 (UMLS CUI [1])
full sample obtained
Item
Was full sample obtained?
boolean
C3176022 (UMLS CUI [1])
service comment
Item
Service comment
text
C0485795 (UMLS CUI [1])
service comment
Item
Service comment
text
C0485795 (UMLS CUI [1])
make of the equipment used
Item
Make of the equipment used to perform...
text
C3176779 (UMLS CUI [1])
manufacturer of equipment used
Item
Manufacturer of the equipment used to perform...
text
C3176781 (UMLS CUI [1])
repeatability of the assay
Item
Repeatability of the assay
float
C3166274 (UMLS CUI [1])
coefficient of variation
Item
Coefficient of variation for the assay
float
C3176770 (UMLS CUI [1])
make of equipment used
Item
Make of the equipment used to perform...
text
C3176779 (UMLS CUI [1])
manufacturer of equipment used
Item
Manufacturer of the equipment used to perform...
text
C3176781 (UMLS CUI [1])
repeatability of the assay
Item
Repeatability of the assay
float
C3166274 (UMLS CUI [1])
coefficient of variation
Item
Coefficient of variation for the assay
float
C3176770 (UMLS CUI [1])
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