ID

45924

Description

Principal Investigator: Janey L. Wiggs, MD PhD, Massachusetts Eye and Ear, Harvard Medical School, Boston MA USA MeSH: Glaucoma,Exfoliation Syndrome https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001053 The overall goal of our research is to elucidate the pathogenesis of exfoliation syndrome and the associated glaucoma, making it possible to implement effective screening and prevention strategies and to develop novel therapies. Cases genotyped for this project are from the Nurses Health Study (NHS), the Health Professionals Follow-up Study (HPFS), the Women's Genome Health Study (WGHS), the Massachusetts Eye and Ear Infirmary (MEEI), Mayo Clinic, the University of Iowa, the University of Miami and Duke University Medical Center. Exfoliation syndrome (XFS) is a common condition that is a major risk factor for high-tension open-angle glaucoma, pre-mature cataract formation, and increased risk of complications during cataract surgery. Previous studies suggest that exfoliation syndrome and the related glaucoma (XFG) are genetically complex, and one gene, LOXL1, has been identified as a major genetic risk factor. LOXL1 variants are found in up to 98% of affected patients; however, these same variants are also present in up to 80% of unaffected individuals, indicating that additional genetic and/or environmental factors are necessary for disease development. Samples genotyped for this study are a case set (1,096 samples) and 24 pedigrees (98 samples). Controls for association analyses are selected from the NEIGHBORHOOD study.

Link

dbGaP study = phs001053

Keywords

  1. 2/27/24 2/27/24 - Simon Heim
Copyright Holder

Janey L. Wiggs, MD PhD, Massachusetts Eye and Ear, Harvard Medical School, Boston MA USA

Uploaded on

February 27, 2024

DOI

To request one please log in.

License

Creative Commons BY 4.0

Model comments :

You can comment on the data model here. Via the speech bubbles at the itemgroups and items you can add comments to those specificially.

Itemgroup comments for :

Item comments for :


    No comments

    In order to download data models you must be logged in. Please log in or register for free.

    dbGaP phs001053 NEI Exfoliation Genotyping Study

    Subject ID, subject source, source subject ID, and consent group of participants with exfoliation syndrome and involved in the "National Eye Institute (NEI) Exfoliation Genotyping Study" project.

    pht007229
    Description

    pht007229

    Alias
    UMLS CUI [1,1]
    C3846158
    Subject ID
    Description

    SUBJECT_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C2348585
    Consent group
    Description

    CONSENT

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0021430
    UMLS CUI [1,2]
    C0441833
    Repository name
    Description

    SUBJECT_SOURCE

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C3847505
    UMLS CUI [1,2]
    C0027365
    Submitted subject ID used in the source repository
    Description

    SOURCE_SUBJECT_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C2348585
    UMLS CUI [1,2]
    C3847505
    UMLS CUI [1,3]
    C0449416

    Similar models

    Subject ID, subject source, source subject ID, and consent group of participants with exfoliation syndrome and involved in the "National Eye Institute (NEI) Exfoliation Genotyping Study" project.

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    pht007229
    C3846158 (UMLS CUI [1,1])
    SUBJECT_ID
    Item
    Subject ID
    string
    C2348585 (UMLS CUI [1,1])
    Item
    Consent group
    text
    C0021430 (UMLS CUI [1,1])
    C0441833 (UMLS CUI [1,2])
    Code List
    Consent group
    CL Item
    Subjects did not participate in the study, did not complete a consent document and are included only for the pedigree structure and/or genotype controls, such as HapMap subjects (0)
    C5418626 (UMLS CUI [1,1])
    C0549184 (UMLS CUI [1,2])
    C0009797 (UMLS CUI [1,3])
    C0205257 (UMLS CUI [1,4])
    C2700399 (UMLS CUI [1,5])
    C0030761 (UMLS CUI [1,6])
    C5418626 (UMLS CUI [2,1])
    C0549184 (UMLS CUI [2,2])
    C0009797 (UMLS CUI [2,3])
    C0205257 (UMLS CUI [2,4])
    C2700399 (UMLS CUI [2,5])
    C0017431 (UMLS CUI [2,6])
    C4553389 (UMLS CUI [2,7])
    CL Item
    General Research Use (GRU) (1)
    C0021430 (UMLS CUI [1,1])
    C0242481 (UMLS CUI [1,2])
    CL Item
    Disease-Specific (Eye Disease) (DS-ED) (2)
    SUBJECT_SOURCE
    Item
    Repository name
    string
    C3847505 (UMLS CUI [1,1])
    C0027365 (UMLS CUI [1,2])
    SOURCE_SUBJECT_ID
    Item
    Submitted subject ID used in the source repository
    string
    C2348585 (UMLS CUI [1,1])
    C3847505 (UMLS CUI [1,2])
    C0449416 (UMLS CUI [1,3])

    Do you need help on how to use the search function? Please watch the corresponding tutorial video for more details and learn how to use the search function most efficiently.

    Watch Tutorial