ID

45918

Description

Principal Investigator: Chunhua Weng, PhD, Department of Biomedical Informatics, Columbia University, College of Physicians and Surgeons, New York, NY, USA MeSH: NA,Renal Insufficiency, Chronic,Alzheimer Disease,Aortic Aneurysm, Abdominal,Asthma,Attention Deficit Disorder with Hyperactivity,Clostridium difficile,Dermatitis, Atopic,Diabetes Mellitus, Type 2,Heart Diseases,Herpes Zoster,Hypothyroidism,Methicillin-Resistant Staphylococcus aureus,Prostatic Hyperplasia https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000961 The Columbia GENIE study contributes and shares phenotype and genotype data for individuals who were treated with our healthcare facilities and consented to share their data with dbGaP for scientific discovery. Some of these individuals have kidney or neurological problems and some are healthy volunteers from the Washington Height patient community. The purpose of this NOMAS study is to obtain information about physical features of the brain, carotid arteries, and heart. Some of our patients are pediatric patients with cardiac conditions. The study sample consists of four patient cohorts: - Northern Manhattan Study (NOMAS), N=1072 - Pediatric Cardiac Genomic Consortium (PCGC), n=374 - Caribbean Hispanics with Familial and Sporadic Late Onset Alzheimer's disease (Caribbean Hispanics/AD), n=330 - Alzheimer's Disease Sequencing Project (ADSP, n=44) - Genetics of Chronic Kidney Disease Study, n=1256

Link

dbGaP study = phs000961

Keywords

Versions (1)
  1. 1/31/24 1/31/24 - Simon Heim
Copyright Holder

Chunhua Weng, PhD, Department of Biomedical Informatics, Columbia University, College of Physicians and Surgeons, New York, NY, USA

Uploaded on

January 31, 2024

DOI

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License

Creative Commons BY 4.0
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dbGaP phs000961 eMERGE III: Columbia GENIE (Genomic Integration with EHR)

English

Eligibility Criteria

5 forms  
Inclusion and exclusion criteria
Description

Inclusion and exclusion criteria

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0680251
Data of the PCGC and two Alzheimer's cohorts are already available through dbGaP prior to the start of this study (phs000571/phs000496/phs000572) and hence are merely referenced here.
Description

Data of the PCGC and two Alzheimer's cohorts are already available through dbGaP prior to the start of this study (phs000571/phs000496/phs000572) and hence are merely referenced here.

Data type

boolean

Alias
UMLS CUI [1,1]
C0470187
UMLS CUI [1,2]
C0681873
UMLS CUI [1,3]
C0002395
UMLS CUI [1,4]
C0599755
UMLS CUI [1,5]
C5420472
UMLS CUI [1,6]
C4266518
For the kidney disease cohort, patients with the diagnosis of Chronic Kidney Disease (CKD) and healthy controls were recruited to the Columbia University CKD Bio-bank.
Description

For the kidney disease cohort, patients with the diagnosis of Chronic Kidney Disease (CKD) and healthy controls were recruited to the Columbia University CKD Bio-bank.

Data type

boolean

Alias
UMLS CUI [1,1]
C0022658
UMLS CUI [1,2]
C0599755
UMLS CUI [1,3]
C0011900
UMLS CUI [1,4]
C1561643
UMLS CUI [2,1]
C2986479
UMLS CUI [2,2]
C2949735
UMLS CUI [2,3]
C0041740
UMLS CUI [2,4]
C0206512
For the NOMAS cohort, eligible participants were stroke-free, were 40 years old, and resided for at least 3 months in a Northern Manhattan household with a telephone.
Description

For the NOMAS cohort, eligible participants were stroke-free, were 40 years old, and resided for at least 3 months in a Northern Manhattan household with a telephone.

Data type

boolean

Alias
UMLS CUI [1,1]
C3846158
UMLS CUI [1,2]
C0599755
UMLS CUI [1,3]
C1548635
UMLS CUI [1,4]
C0038454
UMLS CUI [1,5]
C1518422
UMLS CUI [1,6]
C0001779
UMLS CUI [1,7]
C0237096
UMLS CUI [1,8]
C0872291
UMLS CUI [1,9]
C0017446
UMLS CUI [1,10]
C0020052
UMLS CUI [1,11]
C0039457
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Similar models

Eligibility Criteria

5 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Inclusion and exclusion criteria
C1512693 (UMLS CUI [1,1])
C0680251 (UMLS CUI [1,2])
Data of the PCGC and two Alzheimer's cohorts are already available through dbGaP prior to the start of this study (phs000571/phs000496/phs000572) and hence are merely referenced here.
Item
Data of the PCGC and two Alzheimer's cohorts are already available through dbGaP prior to the start of this study (phs000571/phs000496/phs000572) and hence are merely referenced here.
boolean
C0470187 (UMLS CUI [1,1])
C0681873 (UMLS CUI [1,2])
C0002395 (UMLS CUI [1,3])
C0599755 (UMLS CUI [1,4])
C5420472 (UMLS CUI [1,5])
C4266518 (UMLS CUI [1,6])
For the kidney disease cohort, patients with the diagnosis of Chronic Kidney Disease (CKD) and healthy controls were recruited to the Columbia University CKD Bio-bank.
Item
For the kidney disease cohort, patients with the diagnosis of Chronic Kidney Disease (CKD) and healthy controls were recruited to the Columbia University CKD Bio-bank.
boolean
C0022658 (UMLS CUI [1,1])
C0599755 (UMLS CUI [1,2])
C0011900 (UMLS CUI [1,3])
C1561643 (UMLS CUI [1,4])
C2986479 (UMLS CUI [2,1])
C2949735 (UMLS CUI [2,2])
C0041740 (UMLS CUI [2,3])
C0206512 (UMLS CUI [2,4])
For the NOMAS cohort, eligible participants were stroke-free, were 40 years old, and resided for at least 3 months in a Northern Manhattan household with a telephone.
Item
For the NOMAS cohort, eligible participants were stroke-free, were 40 years old, and resided for at least 3 months in a Northern Manhattan household with a telephone.
boolean
C3846158 (UMLS CUI [1,1])
C0599755 (UMLS CUI [1,2])
C1548635 (UMLS CUI [1,3])
C0038454 (UMLS CUI [1,4])
C1518422 (UMLS CUI [1,5])
C0001779 (UMLS CUI [1,6])
C0237096 (UMLS CUI [1,7])
C0872291 (UMLS CUI [1,8])
C0017446 (UMLS CUI [1,9])
C0020052 (UMLS CUI [1,10])
C0039457 (UMLS CUI [1,11])
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