ID

45792

Descrizione

Principal Investigator: Jorg J. Goronzy, MD PhD, Stanford University, Stanford, CA, USA MeSH: Herpes Zoster,Receptors, Antigen, T-Cell, alpha-beta,Vaccination https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001082 Diversity and size of the antigen-specific T cell receptor (TCR) repertoire are two critical determinants for successful control of chronic infection. Varicella zoster virus (VZV) that establishes latency during childhood is able to escape control mechanisms, in particular with increasing age. We examined the TCR diversity of VZV-specific CD4 T cells in individuals older than 50 years by studying three identical twin pairs and three unrelated individuals before and after vaccination with live attenuated VZV. While all individuals had a small number of dominant T cell clones, the breadth of the VZV-specific repertoire differed markedly among different individuals. A genetic influence was seen for the sharing of individual TCR sequences from antigen-specific cells, but not for repertoire richness or the selection of clonal dominance. VZV vaccination favored the expansion of infrequent VZV-specific TCRs including those from naïve T cells while leaving dominant T cell clones mostly unaffected.

collegamento

dbGaP-study=phs001082

Keywords

  1. 22/06/2023 22/06/2023 - Chiara Middel
Titolare del copyright

Jorg J. Goronzy, MD PhD, Stanford University, Stanford, CA, USA

Caricato su

22 de junho de 2023

DOI

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Licenza

Creative Commons BY 4.0

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dbGaP phs001082 T Cell Responses to Varicella Zoster Virus

This subject phenotype table includes sex and age of subjects, occurance of herpes zoster, and detection of HSV1, HSV2, and CMV.

pht005381
Descrizione

pht005381

Alias
UMLS CUI [1,1]
C3846158
De-identified Subject ID
Descrizione

SUBJECT_ID

Tipo di dati

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Gender of participant
Descrizione

sex

Tipo di dati

text

Alias
UMLS CUI [1,1]
C0079399
Subject age
Descrizione

age

Tipo di dati

text

Unità di misura
  • years
Alias
UMLS CUI [1,1]
C0001779
years
Occurance of herpes zoster
Descrizione

Zoster

Tipo di dati

text

Alias
UMLS CUI [1,1]
C2745955
UMLS CUI [1,2]
C0019360
Detection of herpes simplex virus-1 infection
Descrizione

HSV1

Tipo di dati

text

Alias
UMLS CUI [1,1]
C1294378
UMLS CUI [1,2]
C3714514
Detection of herpes simplex virus-2 infection
Descrizione

HSV2

Tipo di dati

text

Alias
UMLS CUI [1,1]
C1294379
UMLS CUI [1,2]
C3714514
Detection of cytomegalovirus infection
Descrizione

CMV

Tipo di dati

text

Alias
UMLS CUI [1,1]
C1511790
UMLS CUI [1,2]
C0010825
UMLS CUI [1,3]
C3714514

Similar models

This subject phenotype table includes sex and age of subjects, occurance of herpes zoster, and detection of HSV1, HSV2, and CMV.

Name
genere
Description | Question | Decode (Coded Value)
Tipo di dati
Alias
Item Group
pht005381
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
De-identified Subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
Code List
Gender of participant
CL Item
Female (F)
C0086287 (UMLS CUI [1,1])
CL Item
Male (M)
C0086582 (UMLS CUI [1,1])
age
Item
Subject age
text
C0001779 (UMLS CUI [1,1])
Item
Occurance of herpes zoster
text
C2745955 (UMLS CUI [1,1])
C0019360 (UMLS CUI [1,2])
Code List
Occurance of herpes zoster
CL Item
zoster negative (N)
CL Item
zoster positive (Y)
Item
Detection of herpes simplex virus-1 infection
text
C1294378 (UMLS CUI [1,1])
C3714514 (UMLS CUI [1,2])
Code List
Detection of herpes simplex virus-1 infection
CL Item
HSV-1 negative (N)
CL Item
HSV-1 positive (P)
Item
Detection of herpes simplex virus-2 infection
text
C1294379 (UMLS CUI [1,1])
C3714514 (UMLS CUI [1,2])
Code List
Detection of herpes simplex virus-2 infection
CL Item
HSV-2 negative (N)
CL Item
HSV-2 positive (P)
Item
Detection of cytomegalovirus infection
text
C1511790 (UMLS CUI [1,1])
C0010825 (UMLS CUI [1,2])
C3714514 (UMLS CUI [1,3])
Code List
Detection of cytomegalovirus infection
CL Item
CMV negative (N)
CL Item
CMV positive (P)

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