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ID

45749

Beschreibung

Principal Investigator: MeSH: Pediatrics https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001165 The Center for Applied Genomics (CAG) is a specialized Center of Emphasis at the Children's Hospital of Philadelphia (CHOP) with the primary goal of translating basic research findings to medical innovations. The mission of CAG is to develop new and better ways to diagnose and treat children affected by rare and complex medical disorders. We aim to discover genetic causes for the most prevalent diseases of childhood including asthma, autism, diabetes, epilepsy, obesity, schizophrenia, pediatric cancer, and a range of rare diseases. Ultimately, our objective is to generate new diagnostic tests and to guide physicians to the most appropriate therapies. The CAG is one of the world's largest genetics research programs in pediatrics, and the only center at a pediatric hospital to have established a large-scale biobank of genotyped samples. The electronic Medical Records and Genomics (eMERGE) Network is a consortium of 9 clinical sites with EMR linked DNA biobanks, including Northwestern University and its NUgene biobank, funded by the NHGRI (National Human Genome Research Institute) to investigate the use of electronic medical record systems for genomic research. The goal of eMERGE is to conduct genome-wide association studies in approximately 100,000 individuals using EMR-derived phenotypes and DNA from linked biorepositories. Using electronic phenotyping methods, the consortium has been and is using DNA samples from all participating sites to explore the genetic determinants of approximately 80 phenotypes, including both diseases and traits, for which the electronic phenotyping algorithms have or are being published on PheKB.org.

Link

dbGaP-study=phs001165

Stichworte

  1. 04.06.23 04.06.23 - Chiara Middel
Rechteinhaber

Hakon Hakonarson, MD, PhD

Hochgeladen am

4. Juni 2023

DOI

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Lizenz

Creative Commons BY 4.0

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    dbGaP phs001165 eMERGE: Children's Hospital of Philadelphia - WGS

    Sample Attribute Information

    pht007988
    Beschreibung

    pht007988

    Alias
    UMLS CUI [1,1]
    C3846158
    Sample ID
    Beschreibung

    SAMPID

    Datentyp

    string

    Alias
    UMLS CUI [1,1]
    C1299222
    Type of sample
    Beschreibung

    HISTOLOGICAL_TYPE

    Datentyp

    string

    Alias
    UMLS CUI [1,1]
    C2347029
    Sample nucleic acid type
    Beschreibung

    ANALYTE_TYPE

    Datentyp

    string

    Alias
    UMLS CUI [1,1]
    C2347029
    UMLS CUI [1,2]
    C0028606
    Body site from where sample was collected
    Beschreibung

    BODY_SITE

    Datentyp

    string

    Alias
    UMLS CUI [1,1]
    C0449705
    Tumor status of the sample
    Beschreibung

    IS_TUMOR

    Datentyp

    string

    Alias
    UMLS CUI [1,1]
    C0475752

    Ähnliche Modelle

    Sample Attribute Information

    Name
    Typ
    Description | Question | Decode (Coded Value)
    Datentyp
    Alias
    Item Group
    pht007988
    C3846158 (UMLS CUI [1,1])
    SAMPID
    Item
    Sample ID
    string
    C1299222 (UMLS CUI [1,1])
    HISTOLOGICAL_TYPE
    Item
    Type of sample
    string
    C2347029 (UMLS CUI [1,1])
    ANALYTE_TYPE
    Item
    Sample nucleic acid type
    string
    C2347029 (UMLS CUI [1,1])
    C0028606 (UMLS CUI [1,2])
    BODY_SITE
    Item
    Body site from where sample was collected
    string
    C0449705 (UMLS CUI [1,1])
    Item
    Tumor status of the sample
    string
    C0475752 (UMLS CUI [1,1])
    Code List
    Tumor status of the sample
    CL Item
    No tumor (no)

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