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ID

45480

Description

Principal Investigator: Markku Laakso, MD, PhD, University of Eastern Finland and Kuopio University Hospital, Kuopio, Finland MeSH: Metabolic Syndrome,Diabetes Mellitus, Type 2,Cardiovascular Diseases https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000743 The METSIM Study includes 10,197 men, aged from 45 to 73 years, randomly selected from the population register of the town of Kuopio, Eastern Finland, and examined in 2005-2010. The aim of the study is to investigate genetic and non-genetic factors associated with the risk of type 2 diabetes (T2D), cardiovascular disease (CVD), and insulin resistance-related traits in a cross-sectional and longitudinal setting. Study protocol includes collection of data on CVD risk factors (smoking, exercise, diet, history of chronic diseases including coronary heart disease, stroke, cardiac failure, medication, history of diabetes or early onset coronary heart disease in the family), questionnaire on the FINDRISC Score, measurement of height, weight, waist, hip, blood pressure, and bioimpedance for the evaluation of fat percentage. July 2016 - This first study release includes phenotype and whole exome sequencing data of n=982 participants in substudy: Type 2 Diabetes Genetic Exploration by Next-Generation Sequencing in Multi-Ethnic Samples (T2D-GENES) Project 1: Metabolic Syndrome in Men Study (METSIM) - phs001100.v2.p1. The second release (v2) includes phenotype data for the entire METSIM cohort and makes two additional substudies available, phs000919.v1.p1 and phs000752.v1.p1. *The METSIM Study v2 is utilized in the following dbGaP sub-studies.* To view genotypes, other molecular data, and derived variables collected in these sub-studies, please click on the following sub-studies below or in the "Sub-studies" section of this top-level study page phs000743.v2.p1 METSIM Study v2. - phs000752 METSIM FinMetSeq Exome Sequencing - phs000919 METSIM GWAS and Exome Chip - phs001100 METSIM T2D-GENES Exome Sequencing

Link

dbGaP-study=phs000743

Keywords

  1. 12/13/22 12/13/22 - Chiara Middel
Copyright Holder

Markku Laakso, MD, PhD, University of Eastern Finland and Kuopio University Hospital, Kuopio, Finland

Uploaded on

December 13, 2022

DOI

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License

Creative Commons BY 4.0

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    dbGaP phs000743 METSIM (METabolic Syndrome In Men) Study

    Sample ID, analyte type, body site where sample was obtained, histological type of sample, and sequencing center of participants in the "Type 2 Diabetes Genetic Exploration by Next-Generation Sequencing in Multi-Ethnic Samples (T2D-GENES) Project 1: Metabolic Syndrome in Men Study (METSIM)" project.

    pht005605
    Description

    pht005605

    Alias
    UMLS CUI [1,1]
    C3846158
    De-identified sample ID
    Description

    SAMPLE_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C4684638
    UMLS CUI [1,2]
    C1299222
    Body site
    Description

    BODY_SITE

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C1515974
    Analyte type
    Description

    ANALYTE_TYPE

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C4744818
    Histological type
    Description

    HISTOLOGICAL_TYPE

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0449575
    Sequencing center
    Description

    SEQUENCING_CENTER

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C1561491
    UMLS CUI [1,2]
    C0565990

    Similar models

    Sample ID, analyte type, body site where sample was obtained, histological type of sample, and sequencing center of participants in the "Type 2 Diabetes Genetic Exploration by Next-Generation Sequencing in Multi-Ethnic Samples (T2D-GENES) Project 1: Metabolic Syndrome in Men Study (METSIM)" project.

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    pht005605
    C3846158 (UMLS CUI [1,1])
    SAMPLE_ID
    Item
    De-identified sample ID
    string
    C4684638 (UMLS CUI [1,1])
    C1299222 (UMLS CUI [1,2])
    BODY_SITE
    Item
    Body site
    text
    C1515974 (UMLS CUI [1,1])
    ANALYTE_TYPE
    Item
    Analyte type
    string
    C4744818 (UMLS CUI [1,1])
    HISTOLOGICAL_TYPE
    Item
    Histological type
    text
    C0449575 (UMLS CUI [1,1])
    SEQUENCING_CENTER
    Item
    Sequencing center
    text
    C1561491 (UMLS CUI [1,1])
    C0565990 (UMLS CUI [1,2])

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