ID

44992

Descripción

Principal Investigator: Deborah Nickerson, PhD, Department of Genome Sciences, University of Washington, Seattle, WA, USA MeSH: Kabuki syndrome https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000295 The ultimate purpose of this research is to identify genes causing hereditary disorders. We are scaling a new approach to identify the candidate genes and gene mutations that underlie rare human Mendelian (a set of primary tenets relating to the transmission of hereditary characteristics from parent to child) diseases by using exome (protein coding segments of DNA) resequencing. The exome sequences of ten unrelated individuals with a diagnosis of Kabuki Syndrome (OMIM: 147920) were obtained by massively parallel DNA sequencing.

Link

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000295

Palabras clave

  1. 23/6/22 23/6/22 - Dr. Christian Niklas
  2. 12/10/22 12/10/22 - Adrian Schulz
Titular de derechos de autor

Deborah Nickerson, PhD, Department of Genome Sciences, University of Washington, Seattle, WA, USA

Subido en

23 de junio de 2022

DOI

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Licencia

Creative Commons BY 4.0

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dbGaP phs000295 Next Generation Mendelian Genetics: Kabuki Syndrome

This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample aliases and sample use.

pht001531
Descripción

pht001531

Subject ID
Descripción

SUBJID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C2348585
Sample ID
Descripción

SAMPID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C1299222
Source repository where samples originate
Descripción

SAMP_SOURCE

Tipo de datos

string

Alias
UMLS CUI [1,1]
C0370003
UMLS CUI [1,2]
C0449416
Sample ID used in the Source Repository
Descripción

SOURCE_SAMPID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C1299222
UMLS CUI [1,2]
C0449416
Sample Use
Descripción

SAMPLE_USE

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0370003
UMLS CUI [1,2]
C0457083

Similar models

This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample aliases and sample use.

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht001531
SUBJID
Item
Subject ID
string
C2348585 (UMLS CUI [1,1])
SAMPID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
SAMP_SOURCE
Item
Source repository where samples originate
string
C0370003 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
SOURCE_SAMPID
Item
Sample ID used in the Source Repository
string
C1299222 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
Item
Sample Use
text
C0370003 (UMLS CUI [1,1])
C0457083 (UMLS CUI [1,2])
Code List
Sample Use
CL Item
Whole genome sequencing (Seq_DNA_WholeGenome)

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