ID

42476

Beskrivning

Study Title: LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients https://leoss.net Study Indication: COVID-19 Date: 19.03.2021 Published with permission by Prof. Dr. med. J.-J. Vehreschild. LEOSS, a multi-center cohort study, has been created to get more in-depth knowledge about the epidemiology and clinical course of patients infected with SARS-CoV-2. Initiated by the ESCMID Emerging Infections Task Force (EITaF) and the German Infectious Disease Society, and supported by all German Centers for Health Research (DZG), LEOSS has developed into an international network of contributors. Via an integrative research approach with anonymous recruitment and collection of routine data in an open science context, LEOSS is building a uniform clinical dataset and providing real-time analyses. For more information feel free to explore https://leoss.net/. Please note that only cases with known outcome are collected! Baseline / diagnosis is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Criteria of the Uncomplicated Phase: Asymptomatic OR Symptoms of upper respiratory tract infection and/or Nausea, emesis, diarrhea and/or Fever Remember: The Uncomplicated Phase ends, if a previously febrile patient has no fever anymore and has completed 14 days of follow-up without entering Complicated or Critical Phase; then move to Recovery Phase. Also, as soon as one of the criteria of the Complicated or Critical Phase are fulfilled, Uncomplicated Phase ends; move over to there. If the patient has died, the phase ends with the death of the patient. If the patient has died, do not report terminal values, e.g. those recorded after switching off life-support or heart rate "0" after death of the patient. Criteria of the Complicated Phase: * Need for oxygen supplementation (In patients with prior oxygen home therapy, clinically meaningful increase in need for oxygenation.) * paO2 at room air < 70 mmHg * SO2 at room air < 90 % * GOT or GPT > 5x ULN * New cardiac arrhythmia * New pericardial effusion >1cm * New heart failure with pulmonary edema, congestive hepatopathy or peripheral edema Remember: The Complicated Phase ends, if none of the criteria for the Complicated Phase is fulfilled anymore AND the patient is free of fever; then move to Recovery Phase. Also, as soon as one of the criteria of the Critical Phase are fulfilled, Complicated Phase ends; move over to Critical Phase. If the patient has died, the phase ends with the death of the patient. If the patient has died, do not report terminal values, e.g. those recorded after switching off life-support or heart rate "0" after death of the patient. Criteria of the Critical Phase: * Need for catecholamines * Life-threatening cardiac arrhythmia * Mechanical ventilation (invasive or non-invasive) * Liver failure with Quick< 50% * qSOFA >= 2 * Renal failure in need of dialysis Remember: The Critical Phase ends as soon as none of the criteria for the Critical Phase is fulfilled anymore AND the patient is free of fever. If the patient has died, it ends with the death of the patient. If the patient has died, do not report terminal values, i.e. those recorded after turning off life-support or heart rate "0" after death of the patient. Criteria of the Recovery Phase: *Improvement by at least one phase, i.e. Critical to Complicated or Complicated to Uncomplicated * Defervescence Remember: Uncomplicated asymptomatic patients enter recovery phase after 14 days of observation without disease progression No further progression or re-hospitalization If a text field can't be filled out, note 'ND' (for not determined).

Länk

https://leoss.net

Nyckelord

Versioner (3)
  1. 2021-07-02 2021-07-02 - Sarah Riepenhausen
  2. 2021-07-15 2021-07-15 - Sarah Riepenhausen
  3. 2021-07-16 2021-07-16 - Sarah Riepenhausen
Rättsinnehavare

LEOSS

Uppladdad den

16 juli 2021

DOI

10.21961/mdm:42476

Licens

Creative Commons BY 4.0
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LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients

Engelsk

HIV sub-cohort

23 Formulär  
HIV transmission risk
Beskrivning

HIV transmission risk

Alias
UMLS CUI-1
C0019682
UMLS CUI-2
C0035648
UMLS CUI-3
C1443844
Men having sex with men
Beskrivning

Men having sex with men

Datatyp

boolean

Alias
UMLS CUI [1]
C2827413
Heterosexual contacts
Beskrivning

Heterosexual contacts

Datatyp

boolean

Alias
UMLS CUI [1]
C4272228
Injection drug use
Beskrivning

Injection drug use

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0086190
UMLS CUI [1,2]
C1272883
Patient from an endemic area
Beskrivning

Patient from HIV endemic area

Datatyp

boolean

Alias
UMLS CUI [1,1]
C3258107
UMLS CUI [1,2]
C0277550
UMLS CUI [1,3]
C0019682
Blood transfusion (excl. Haemophilia)
Beskrivning

Blood transfusion (excl. Haemophilia)

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0005841
UMLS CUI [1,2]
C1705847
UMLS CUI [1,3]
C0684275
Haemophilia
Beskrivning

Haemophilia

Datatyp

boolean

Alias
UMLS CUI [1]
C0684275
Other HIV transmission risk
Beskrivning

Other HIV transmission risk

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0019682
UMLS CUI [1,2]
C0035648
UMLS CUI [1,3]
C1443844
UMLS CUI [1,4]
C0205394
Indicate other HIV transmission risk:
Beskrivning

Indicate other HIV transmission risk

Datatyp

text

Alias
UMLS CUI [1,1]
C0019682
UMLS CUI [1,2]
C0035648
UMLS CUI [1,3]
C1443844
UMLS CUI [1,4]
C0205394
UMLS CUI [1,5]
C1521902
Unknown HIV transmission risk
Beskrivning

Unknown HIV transmission risk

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0035648
UMLS CUI [1,3]
C1443844
UMLS CUI [1,4]
C0205394
Does the patient receive current antiretroviral therapy?
Beskrivning

Does the patient receive current antiretroviral therapy?

Alias
UMLS CUI-1
C1963724
UMLS CUI-2
C0521116
Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
Beskrivning

Current in this context means at the time of first SARS-CoV-2 detection.

Datatyp

integer

Alias
UMLS CUI [1,1]
C0521116
UMLS CUI [1,2]
C0162714
UMLS CUI [2,1]
C0521116
UMLS CUI [2,2]
C0674432
UMLS CUI [3,1]
C0521116
UMLS CUI [3,2]
C0292818
UMLS CUI [4,1]
C0521116
UMLS CUI [4,2]
C1435444
UMLS CUI [5,1]
C0521116
UMLS CUI [5,2]
C1145759
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
Beskrivning

Current in this context means at the time of first SARS-CoV-2 detection.

Datatyp

integer

Alias
UMLS CUI [1,1]
C0521116
UMLS CUI [1,2]
C0376601
UMLS CUI [2,1]
C0521116
UMLS CUI [2,2]
C1871526
UMLS CUI [3,1]
C0521116
UMLS CUI [3,2]
C3253985
UMLS CUI [4,1]
C0521116
UMLS CUI [4,2]
C4507568
UMLS CUI [5,1]
C0521116
UMLS CUI [5,2]
C2606637
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Beskrivning

Current in this context means at the time of first SARS-CoV-2 detection.

Datatyp

integer

Alias
UMLS CUI [1,1]
C0521116
UMLS CUI [1,2]
C3541376
UMLS CUI [2,1]
C0521116
UMLS CUI [2,2]
C0674428
UMLS CUI [3,1]
C0521116
UMLS CUI [3,2]
C0132326
UMLS CUI [4,1]
C0521116
UMLS CUI [4,2]
C1566826
UMLS CUI [5,1]
C0521116
UMLS CUI [5,2]
C4045491
Nucleoside analog reverse-transcriptase inhibitors
Beskrivning

Current in this context means at the time of first SARS-CoV-2 detection.

Datatyp

integer

Alias
UMLS CUI [1,1]
C0521116
UMLS CUI [1,2]
C3537103
Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
Beskrivning

Current in this context means at the time of first SARS-CoV-2 detection.

Datatyp

integer

Alias
UMLS CUI [1,1]
C0521116
UMLS CUI [1,2]
C1449715
UMLS CUI [2,1]
C0521116
UMLS CUI [2,2]
C1667052
UMLS CUI [3,1]
C0521116
UMLS CUI [3,2]
C0537439
In case of antiretroviral therapy for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
Beskrivning

In case of antiretroviral therapy for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?

Alias
UMLS CUI-1
C1963724
UMLS CUI-2
C0449238
UMLS CUI-3
C0332152
UMLS CUI-4
C5203676
UMLS CUI-5
C1511790
In case of antiretroviral therapy: for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
Beskrivning

Please indicate the number of months antiretroviral therapy had been taken.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1963724
UMLS CUI [1,2]
C0449238
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1511790
Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
Beskrivning

Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?

Alias
UMLS CUI-1
C1963724
UMLS CUI-2
C3665894
UMLS CUI-3
C1704686
UMLS CUI-5
C0347984
UMLS CUI-6
C5203670
Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
Beskrivning

Antiretroviral therapy changed / started during SARS-Cov-2 infection

Datatyp

integer

Alias
UMLS CUI [1,1]
C1963724
UMLS CUI [1,2]
C3665894
UMLS CUI [1,3]
C0347984
UMLS CUI [1,4]
C5203670
UMLS CUI [2,1]
C1963724
UMLS CUI [2,2]
C1704686
UMLS CUI [2,3]
C0347984
UMLS CUI [2,4]
C5203670
Please indicate the regimen at the end of the follow-up period
Beskrivning

Please indicate the regimen at the end of the follow-up period

Alias
UMLS CUI-1
C1963724
UMLS CUI-2
C1276413
UMLS CUI-3
C1522577
UMLS CUI-4
C0444930
Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
Beskrivning

In case no changes have been implemented, please name the original substances (as indicated in the question above).

Datatyp

integer

Alias
UMLS CUI [1,1]
C1522577
UMLS CUI [1,2]
C0444930
UMLS CUI [1,3]
C0162714
UMLS CUI [2,1]
C1522577
UMLS CUI [2,2]
C0444930
UMLS CUI [2,3]
C0674432
UMLS CUI [3,1]
C1522577
UMLS CUI [3,2]
C0444930
UMLS CUI [3,3]
C0292818
UMLS CUI [4,1]
C1522577
UMLS CUI [4,2]
C0444930
UMLS CUI [4,3]
C1435444
UMLS CUI [5,1]
C1522577
UMLS CUI [5,2]
C0444930
UMLS CUI [5,3]
C1145759
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
Beskrivning

In case no changes have been implemented, please name the original substances (as indicated in the question above).

Datatyp

integer

Alias
UMLS CUI [1,1]
C1522577
UMLS CUI [1,2]
C0444930
UMLS CUI [1,3]
C0376601
UMLS CUI [2,1]
C1522577
UMLS CUI [2,2]
C0444930
UMLS CUI [2,3]
C1871526
UMLS CUI [3,1]
C1522577
UMLS CUI [3,2]
C0444930
UMLS CUI [3,3]
C3253985
UMLS CUI [4,1]
C1522577
UMLS CUI [4,2]
C0444930
UMLS CUI [4,3]
C4507568
UMLS CUI [5,1]
C1522577
UMLS CUI [5,2]
C0444930
UMLS CUI [5,3]
C2606637
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Beskrivning

In case no changes have been implemented, please name the original substances (as indicated in the question above).

Datatyp

integer

Alias
UMLS CUI [1,1]
C1522577
UMLS CUI [1,2]
C0444930
UMLS CUI [1,3]
C3541376
UMLS CUI [2,1]
C1522577
UMLS CUI [2,2]
C0444930
UMLS CUI [2,3]
C0674428
UMLS CUI [3,1]
C1522577
UMLS CUI [3,2]
C0444930
UMLS CUI [3,3]
C0132326
UMLS CUI [4,1]
C1522577
UMLS CUI [4,2]
C0444930
UMLS CUI [4,3]
C1566826
UMLS CUI [5,1]
C1522577
UMLS CUI [5,2]
C0444930
UMLS CUI [5,3]
C4045491
Nucleoside analog reverse-transcriptase inhibitors
Beskrivning

In case no changes have been implemented, please name the original substances (as indicated in the question above).

Datatyp

integer

Alias
UMLS CUI [1,1]
C1522577
UMLS CUI [1,2]
C0444930
UMLS CUI [1,3]
C3537103
Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
Beskrivning

In case no changes have been implemented, please name the original substances (as indicated in the question above).

Datatyp

integer

Alias
UMLS CUI [1,1]
C1522577
UMLS CUI [1,2]
C0444930
UMLS CUI [1,3]
C1449715
UMLS CUI [2,1]
C1522577
UMLS CUI [2,2]
C0444930
UMLS CUI [2,3]
C1667052
UMLS CUI [3,1]
C1522577
UMLS CUI [3,2]
C0444930
UMLS CUI [3,3]
C0537439
CD4+ T-cell count (abs.)
Beskrivning

CD4+ T-cell count (abs.)

Alias
UMLS CUI-1
C1277776
CD4+ (abs): Before SARS-CoV-2 detection
Beskrivning

Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277776
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C1511790
CD4+ (abs): Baseline (at SARS-CoV-2 detection)
Beskrivning

Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277776
UMLS CUI [1,2]
C1442488
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C1511790
CD4+ (abs): Uncomplicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277776
UMLS CUI [1,2]
C0443334
UMLS CUI [1,3]
C0205390
CD4+ (abs): Complicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277776
UMLS CUI [1,2]
C0231242
UMLS CUI [1,3]
C0205390
CD4+ (abs): Critical phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277776
UMLS CUI [1,2]
C1511545
UMLS CUI [1,3]
C0205390
CD4+ (abs): Recovery phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277776
UMLS CUI [1,2]
C2004454
UMLS CUI [1,3]
C0205390
CD4+ T-cell count (rel.)
Beskrivning

CD4+ T-cell count (rel.)

Alias
UMLS CUI-1
C2698595
UMLS CUI-2
C0205345
CD4+ (rel): Before SARS-CoV-2 detection
Beskrivning

Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698595
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1511790
CD4+ (rel): Baseline (at SARS-CoV-2 detection)
Beskrivning

Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698595
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C1442488
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1511790
CD4+ (rel): Uncomplicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698595
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C0443334
UMLS CUI [1,4]
C0205390
CD4+ (rel): Complicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698595
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C0231242
UMLS CUI [1,4]
C0205390
CD4+ (rel): Critical phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698595
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C1511545
UMLS CUI [1,4]
C0205390
CD4+ (rel): Recovery phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698595
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C2004454
UMLS CUI [1,4]
C0205390
Please indicate the CDC stage at baseline
Beskrivning

Please indicate the CDC stage at baseline

Alias
UMLS CUI-1
C1272816
UMLS CUI-2
C1442488
Please indicate the CDC stage at baseline
Beskrivning

CDC stages are mainly defined by CD4 count (see figure on the following website), or stage-3-defining illness which can be revised at https://www.cdc.gov/mmwr/preview/mmwrhtml/rr6303a1.htm?s_cid=rr6303a1_e

Datatyp

integer

Alias
UMLS CUI [1,1]
C1272816
UMLS CUI [1,2]
C1442488
CD8+ T-cell count (abs.)
Beskrivning

CD8+ T-cell count (abs.)

Alias
UMLS CUI-1
C1277777
CD8+ (abs): Before SARS-CoV-2 detection
Beskrivning

Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277777
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C1511790
CD8+ (abs): Baseline (at SARS-CoV-2 detection)
Beskrivning

Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277777
UMLS CUI [1,2]
C1442488
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C1511790
CD8+ (abs): Uncomplicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277777
UMLS CUI [1,2]
C0443334
UMLS CUI [1,3]
C0205390
CD8+ (abs): Complicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277777
UMLS CUI [1,2]
C0231242
UMLS CUI [1,3]
C0205390
CD8+ (abs): Critical phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277777
UMLS CUI [1,2]
C1511545
UMLS CUI [1,3]
C0205390
CD8+ (abs): Recovery phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1277777
UMLS CUI [1,2]
C2004454
UMLS CUI [1,3]
C0205390
CD8+ T-cell count (rel.)
Beskrivning

CD8+ T-cell count (rel.)

Alias
UMLS CUI-1
C2698600
UMLS CUI-2
C0205345
CD8+ (rel): Before SARS-CoV-2 detection
Beskrivning

Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698600
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1511790
CD8+ (rel): Baseline (at SARS-CoV-2 detection)
Beskrivning

Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698600
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C1442488
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1511790
CD8+ (rel): Uncomplicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698600
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C0443334
UMLS CUI [1,4]
C0205390
CD8+ (rel): Complicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698600
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C0231242
UMLS CUI [1,4]
C0205390
CD8+ (rel): Critical phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698600
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C1511545
UMLS CUI [1,4]
C0205390
CD8+ (rel): Recovery phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C2698600
UMLS CUI [1,2]
C0205345
UMLS CUI [1,3]
C2004454
UMLS CUI [1,4]
C0205390
Viral load
Beskrivning

Viral load

Alias
UMLS CUI-1
C1168369
HIV viral load: Before SARS-CoV-2 detection
Beskrivning

Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1168369
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C1511790
HIV viral load: Baseline (at SARS-CoV-2 detection)
Beskrivning

Please indicate the lowest count at SARS-CoV-2 detection.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1168369
UMLS CUI [1,2]
C1442488
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C1511790
HIV viral load: Uncomplicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1168369
UMLS CUI [1,2]
C0443334
UMLS CUI [1,3]
C0205390
HIV viral load: Complicated phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1168369
UMLS CUI [1,2]
C0231242
UMLS CUI [1,3]
C0205390
HIV viral load: Critical phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1168369
UMLS CUI [1,2]
C1511545
UMLS CUI [1,3]
C0205390
HIV viral load: Recovery phase
Beskrivning

Please indicate the lowest count during the whole phase. If no information is available select unknown.

Datatyp

integer

Alias
UMLS CUI [1,1]
C1168369
UMLS CUI [1,2]
C2004454
UMLS CUI [1,3]
C0205390
Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
Beskrivning

Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?

Alias
UMLS CUI-1
C0029118
UMLS CUI-2
C0740830
UMLS CUI-3
C0036916
UMLS CUI-4
C5203670
Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
Beskrivning

Opportunistic infections, AIDS-defining illnesses, STI during COVID-19

Datatyp

integer

Alias
UMLS CUI [1,1]
C0029118
UMLS CUI [1,2]
C5203670
UMLS CUI [2,1]
C0740830
UMLS CUI [2,2]
C5203670
UMLS CUI [3,1]
C0036916
UMLS CUI [3,2]
C5203670
Indicate opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection):
Beskrivning

Indicate opportunistic infections, AIDS-defining illnesses, STI during COVID-19

Datatyp

text

Alias
UMLS CUI [1,1]
C1521902
UMLS CUI [1,2]
C0029118
UMLS CUI [1,3]
C5203670
UMLS CUI [2,1]
C1521902
UMLS CUI [2,2]
C0740830
UMLS CUI [2,3]
C5203670
UMLS CUI [3,1]
C1521902
UMLS CUI [3,2]
C0036916
UMLS CUI [3,3]
C5203670
Is data entry for this section finished?
Beskrivning

Is data entry for this section finished?

Alias
UMLS CUI-1
C4684556
UMLS CUI-2
C1828479
UMLS CUI-3
C0205197
Is data entry for this section finished?
Beskrivning

Is data entry for this section finished?

Datatyp

integer

Alias
UMLS CUI [1,1]
C4684556
UMLS CUI [1,2]
C1828479
UMLS CUI [1,3]
C0205197
Tillbaka till toppen

Similar models

HIV sub-cohort

23 Formulär
Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
HIV transmission risk
C0019682 (UMLS CUI-1)
C0035648 (UMLS CUI-2)
C1443844 (UMLS CUI-3)
Men having sex with men
Item
Men having sex with men
boolean
C2827413 (UMLS CUI [1])
Heterosexual contacts
Item
Heterosexual contacts
boolean
C4272228 (UMLS CUI [1])
Injection drug use
Item
Injection drug use
boolean
C0086190 (UMLS CUI [1,1])
C1272883 (UMLS CUI [1,2])
Patient from HIV endemic area
Item
Patient from an endemic area
boolean
C3258107 (UMLS CUI [1,1])
C0277550 (UMLS CUI [1,2])
C0019682 (UMLS CUI [1,3])
Blood transfusion (excl. Haemophilia)
Item
Blood transfusion (excl. Haemophilia)
boolean
C0005841 (UMLS CUI [1,1])
C1705847 (UMLS CUI [1,2])
C0684275 (UMLS CUI [1,3])
Haemophilia
Item
Haemophilia
boolean
C0684275 (UMLS CUI [1])
Other HIV transmission risk
Item
Other HIV transmission risk
boolean
C0019682 (UMLS CUI [1,1])
C0035648 (UMLS CUI [1,2])
C1443844 (UMLS CUI [1,3])
C0205394 (UMLS CUI [1,4])
Indicate other HIV transmission risk
Item
Indicate other HIV transmission risk:
text
C0019682 (UMLS CUI [1,1])
C0035648 (UMLS CUI [1,2])
C1443844 (UMLS CUI [1,3])
C0205394 (UMLS CUI [1,4])
C1521902 (UMLS CUI [1,5])
Unknown HIV transmission risk
Item
Unknown HIV transmission risk
boolean
C0439673 (UMLS CUI [1,1])
C0035648 (UMLS CUI [1,2])
C1443844 (UMLS CUI [1,3])
C0205394 (UMLS CUI [1,4])
Item Group
Does the patient receive current antiretroviral therapy?
C1963724 (UMLS CUI-1)
C0521116 (UMLS CUI-2)
Item
Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
integer
C0521116 (UMLS CUI [1,1])
C0162714 (UMLS CUI [1,2])
C0521116 (UMLS CUI [2,1])
C0674432 (UMLS CUI [2,2])
C0521116 (UMLS CUI [3,1])
C0292818 (UMLS CUI [3,2])
C0521116 (UMLS CUI [4,1])
C1435444 (UMLS CUI [4,2])
C0521116 (UMLS CUI [5,1])
C1145759 (UMLS CUI [5,2])
Gender
Code List
Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
integer
C0521116 (UMLS CUI [1,1])
C0376601 (UMLS CUI [1,2])
C0521116 (UMLS CUI [2,1])
C1871526 (UMLS CUI [2,2])
C0521116 (UMLS CUI [3,1])
C3253985 (UMLS CUI [3,2])
C0521116 (UMLS CUI [4,1])
C4507568 (UMLS CUI [4,2])
C0521116 (UMLS CUI [5,1])
C2606637 (UMLS CUI [5,2])
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
Code List
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
integer
C0521116 (UMLS CUI [1,1])
C3541376 (UMLS CUI [1,2])
C0521116 (UMLS CUI [2,1])
C0674428 (UMLS CUI [2,2])
C0521116 (UMLS CUI [3,1])
C0132326 (UMLS CUI [3,2])
C0521116 (UMLS CUI [4,1])
C1566826 (UMLS CUI [4,2])
C0521116 (UMLS CUI [5,1])
C4045491 (UMLS CUI [5,2])
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Code List
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Nucleoside analog reverse-transcriptase inhibitors
integer
C0521116 (UMLS CUI [1,1])
C3537103 (UMLS CUI [1,2])
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Code List
Nucleoside analog reverse-transcriptase inhibitors
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
integer
C0521116 (UMLS CUI [1,1])
C1449715 (UMLS CUI [1,2])
C0521116 (UMLS CUI [2,1])
C1667052 (UMLS CUI [2,2])
C0521116 (UMLS CUI [3,1])
C0537439 (UMLS CUI [3,2])
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Code List
Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item Group
In case of antiretroviral therapy for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
C1963724 (UMLS CUI-1)
C0449238 (UMLS CUI-2)
C0332152 (UMLS CUI-3)
C5203676 (UMLS CUI-4)
C1511790 (UMLS CUI-5)
Item
In case of antiretroviral therapy: for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
integer
C1963724 (UMLS CUI [1,1])
C0449238 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1511790 (UMLS CUI [1,5])
undefined item
Code List
In case of antiretroviral therapy: for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
CL Item
< 3 months (1)
CL Item
3 - 6 months (2)
CL Item
> 6 months (3)
CL Item
Unknown (4)
CL Item
No antiretroviral therapy (5)
Item Group
Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
C1963724 (UMLS CUI-1)
C3665894 (UMLS CUI-2)
C1704686 (UMLS CUI-3)
C0347984 (UMLS CUI-5)
C5203670 (UMLS CUI-6)
Item
Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
integer
C1963724 (UMLS CUI [1,1])
C3665894 (UMLS CUI [1,2])
C0347984 (UMLS CUI [1,3])
C5203670 (UMLS CUI [1,4])
C1963724 (UMLS CUI [2,1])
C1704686 (UMLS CUI [2,2])
C0347984 (UMLS CUI [2,3])
C5203670 (UMLS CUI [2,4])
undefined item
Code List
Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item Group
Please indicate the regimen at the end of the follow-up period
C1963724 (UMLS CUI-1)
C1276413 (UMLS CUI-2)
C1522577 (UMLS CUI-3)
C0444930 (UMLS CUI-4)
Item
Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
integer
C1522577 (UMLS CUI [1,1])
C0444930 (UMLS CUI [1,2])
C0162714 (UMLS CUI [1,3])
C1522577 (UMLS CUI [2,1])
C0444930 (UMLS CUI [2,2])
C0674432 (UMLS CUI [2,3])
C1522577 (UMLS CUI [3,1])
C0444930 (UMLS CUI [3,2])
C0292818 (UMLS CUI [3,3])
C1522577 (UMLS CUI [4,1])
C0444930 (UMLS CUI [4,2])
C1435444 (UMLS CUI [4,3])
C1522577 (UMLS CUI [5,1])
C0444930 (UMLS CUI [5,2])
C1145759 (UMLS CUI [5,3])
Gender
Code List
Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
integer
C1522577 (UMLS CUI [1,1])
C0444930 (UMLS CUI [1,2])
C0376601 (UMLS CUI [1,3])
C1522577 (UMLS CUI [2,1])
C0444930 (UMLS CUI [2,2])
C1871526 (UMLS CUI [2,3])
C1522577 (UMLS CUI [3,1])
C0444930 (UMLS CUI [3,2])
C3253985 (UMLS CUI [3,3])
C1522577 (UMLS CUI [4,1])
C0444930 (UMLS CUI [4,2])
C4507568 (UMLS CUI [4,3])
C1522577 (UMLS CUI [5,1])
C0444930 (UMLS CUI [5,2])
C2606637 (UMLS CUI [5,3])
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
Code List
Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
integer
C1522577 (UMLS CUI [1,1])
C0444930 (UMLS CUI [1,2])
C3541376 (UMLS CUI [1,3])
C1522577 (UMLS CUI [2,1])
C0444930 (UMLS CUI [2,2])
C0674428 (UMLS CUI [2,3])
C1522577 (UMLS CUI [3,1])
C0444930 (UMLS CUI [3,2])
C0132326 (UMLS CUI [3,3])
C1522577 (UMLS CUI [4,1])
C0444930 (UMLS CUI [4,2])
C1566826 (UMLS CUI [4,3])
C1522577 (UMLS CUI [5,1])
C0444930 (UMLS CUI [5,2])
C4045491 (UMLS CUI [5,3])
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Code List
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Nucleoside analog reverse-transcriptase inhibitors
integer
C1522577 (UMLS CUI [1,1])
C0444930 (UMLS CUI [1,2])
C3537103 (UMLS CUI [1,3])
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Code List
Nucleoside analog reverse-transcriptase inhibitors
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item
Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
integer
C1522577 (UMLS CUI [1,1])
C0444930 (UMLS CUI [1,2])
C1449715 (UMLS CUI [1,3])
C1522577 (UMLS CUI [2,1])
C0444930 (UMLS CUI [2,2])
C1667052 (UMLS CUI [2,3])
C1522577 (UMLS CUI [3,1])
C0444930 (UMLS CUI [3,2])
C0537439 (UMLS CUI [3,3])
Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
Code List
Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Item Group
CD4+ T-cell count (abs.)
C1277776 (UMLS CUI-1)
Item
CD4+ (abs): Before SARS-CoV-2 detection
integer
C1277776 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C1511790 (UMLS CUI [1,4])
Before SARS-CoV-2 detection
Code List
CD4+ (abs): Before SARS-CoV-2 detection
CL Item
< 200 Cells / µL (1)
CL Item
200-500 Cells / µL (2)
CL Item
> 500 Cells / µL (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (abs): Baseline (at SARS-CoV-2 detection)
integer
C1277776 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C1511790 (UMLS CUI [1,4])
Before SARS-CoV-2 detection
Code List
CD4+ (abs): Baseline (at SARS-CoV-2 detection)
CL Item
< 200 Cells / µL (1)
CL Item
200-500 Cells / µL (2)
CL Item
> 500 Cells / µL (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (abs): Uncomplicated phase
integer
C1277776 (UMLS CUI [1,1])
C0443334 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
Before SARS-CoV-2 detection
Code List
CD4+ (abs): Uncomplicated phase
CL Item
< 200 Cells / µL (1)
CL Item
200-500 Cells / µL (2)
CL Item
> 500 Cells / µL (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (abs): Complicated phase
integer
C1277776 (UMLS CUI [1,1])
C0231242 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
Before SARS-CoV-2 detection
Code List
CD4+ (abs): Complicated phase
CL Item
< 200 Cells / µL (1)
CL Item
200-500 Cells / µL (2)
CL Item
> 500 Cells / µL (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (abs): Critical phase
integer
C1277776 (UMLS CUI [1,1])
C1511545 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
Before SARS-CoV-2 detection
Code List
CD4+ (abs): Critical phase
CL Item
< 200 Cells / µL (1)
CL Item
200-500 Cells / µL (2)
CL Item
> 500 Cells / µL (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (abs): Recovery phase
integer
C1277776 (UMLS CUI [1,1])
C2004454 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
Before SARS-CoV-2 detection
Code List
CD4+ (abs): Recovery phase
CL Item
< 200 Cells / µL (1)
CL Item
200-500 Cells / µL (2)
CL Item
> 500 Cells / µL (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item Group
CD4+ T-cell count (rel.)
C2698595 (UMLS CUI-1)
C0205345 (UMLS CUI-2)
Item
CD4+ (rel): Before SARS-CoV-2 detection
integer
C2698595 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1511790 (UMLS CUI [1,5])
Before SARS-CoV-2 detection
Code List
CD4+ (rel): Before SARS-CoV-2 detection
CL Item
< 14 % (1)
CL Item
14 - 25 % (2)
CL Item
> 25 % (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (rel): Baseline (at SARS-CoV-2 detection)
integer
C2698595 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1511790 (UMLS CUI [1,5])
Before SARS-CoV-2 detection
Code List
CD4+ (rel): Baseline (at SARS-CoV-2 detection)
CL Item
< 14 % (1)
CL Item
14 - 25 % (2)
CL Item
> 25 % (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (rel): Uncomplicated phase
integer
C2698595 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C0443334 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
Before SARS-CoV-2 detection
Code List
CD4+ (rel): Uncomplicated phase
CL Item
< 14 % (1)
CL Item
14 - 25 % (2)
CL Item
> 25 % (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (rel): Complicated phase
integer
C2698595 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C0231242 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
Before SARS-CoV-2 detection
Code List
CD4+ (rel): Complicated phase
CL Item
< 14 % (1)
CL Item
14 - 25 % (2)
CL Item
> 25 % (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (rel): Critical phase
integer
C2698595 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C1511545 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
Before SARS-CoV-2 detection
Code List
CD4+ (rel): Critical phase
CL Item
< 14 % (1)
CL Item
14 - 25 % (2)
CL Item
> 25 % (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD4+ (rel): Recovery phase
integer
C2698595 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C2004454 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
Before SARS-CoV-2 detection
Code List
CD4+ (rel): Recovery phase
CL Item
< 14 % (1)
CL Item
14 - 25 % (2)
CL Item
> 25 % (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item Group
Please indicate the CDC stage at baseline
C1272816 (UMLS CUI-1)
C1442488 (UMLS CUI-2)
Item
Please indicate the CDC stage at baseline
integer
C1272816 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
HIV CDC stage at baseline
Code List
Please indicate the CDC stage at baseline
CL Item
Stage 1 (1)
CL Item
Stage 2 (2)
CL Item
Stage 3 (3)
CL Item
Unknown (4)
Item Group
CD8+ T-cell count (abs.)
C1277777 (UMLS CUI-1)
Item
CD8+ (abs): Before SARS-CoV-2 detection
integer
C1277777 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C1511790 (UMLS CUI [1,4])
CD8+ (abs): Before SARS-CoV-2 detection
Code List
CD8+ (abs): Before SARS-CoV-2 detection
CL Item
< 250 cells / μl (1)
CL Item
250 - 1000 cells / μl (2)
CL Item
> 1000 cells / μl (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (abs): Baseline (at SARS-CoV-2 detection)
integer
C1277777 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C1511790 (UMLS CUI [1,4])
CD8+ (abs): Baseline (at SARS-CoV-2 detection)
Code List
CD8+ (abs): Baseline (at SARS-CoV-2 detection)
CL Item
< 250 cells / μl (1)
CL Item
250 - 1000 cells / μl (2)
CL Item
> 1000 cells / μl (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (abs): Uncomplicated phase
integer
C1277777 (UMLS CUI [1,1])
C0443334 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (abs): Uncomplicated phase
Code List
CD8+ (abs): Uncomplicated phase
CL Item
< 250 cells / μl (1)
CL Item
250 - 1000 cells / μl (2)
CL Item
> 1000 cells / μl (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (abs): Complicated phase
integer
C1277777 (UMLS CUI [1,1])
C0231242 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (abs): Complicated phase
Code List
CD8+ (abs): Complicated phase
CL Item
< 250 cells / μl (1)
CL Item
250 - 1000 cells / μl (2)
CL Item
> 1000 cells / μl (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (abs): Critical phase
integer
C1277777 (UMLS CUI [1,1])
C1511545 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (abs): Critical phase
Code List
CD8+ (abs): Critical phase
CL Item
< 250 cells / μl (1)
CL Item
250 - 1000 cells / μl (2)
CL Item
> 1000 cells / μl (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (abs): Recovery phase
integer
C1277777 (UMLS CUI [1,1])
C2004454 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (abs): Recovery phase
Code List
CD8+ (abs): Recovery phase
CL Item
< 250 cells / μl (1)
CL Item
250 - 1000 cells / μl (2)
CL Item
> 1000 cells / μl (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item Group
CD8+ T-cell count (rel.)
C2698600 (UMLS CUI-1)
C0205345 (UMLS CUI-2)
Item
CD8+ (rel): Before SARS-CoV-2 detection
integer
C2698600 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1511790 (UMLS CUI [1,5])
CD8+ (rel): Before SARS-CoV-2 detection
Code List
CD8+ (rel): Before SARS-CoV-2 detection
CL Item
< 15 % (1)
CL Item
15 - 40 % (2)
CL Item
> 40 %  (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (rel): Baseline (at SARS-CoV-2 detection)
integer
C2698600 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C1442488 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1511790 (UMLS CUI [1,5])
CD8+ (rel): Baseline (at SARS-CoV-2 detection)
Code List
CD8+ (rel): Baseline (at SARS-CoV-2 detection)
CL Item
< 15 % (1)
CL Item
15 - 40 % (2)
CL Item
> 40 %  (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (rel): Uncomplicated phase
integer
C2698600 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C0443334 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
CD8+ (rel): Uncomplicated phase
Code List
CD8+ (rel): Uncomplicated phase
CL Item
< 15 % (1)
CL Item
15 - 40 % (2)
CL Item
> 40 %  (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (rel): Complicated phase
integer
C2698600 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C0231242 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
CD8+ (rel): Complicated phase
Code List
CD8+ (rel): Complicated phase
CL Item
< 15 % (1)
CL Item
15 - 40 % (2)
CL Item
> 40 %  (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (rel): Critical phase
integer
C2698600 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C1511545 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
CD8+ (rel): Critical phase
Code List
CD8+ (rel): Critical phase
CL Item
< 15 % (1)
CL Item
15 - 40 % (2)
CL Item
> 40 %  (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item
CD8+ (rel): Recovery phase
integer
C2698600 (UMLS CUI [1,1])
C0205345 (UMLS CUI [1,2])
C2004454 (UMLS CUI [1,3])
C0205390 (UMLS CUI [1,4])
CD8+ (rel): Recovery phase
Code List
CD8+ (rel): Recovery phase
CL Item
< 15 % (1)
CL Item
15 - 40 % (2)
CL Item
> 40 %  (3)
CL Item
Unknown (4)
CL Item
Not done (5)
Item Group
Viral load
C1168369 (UMLS CUI-1)
Item
HIV viral load: Before SARS-CoV-2 detection
integer
C1168369 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C1511790 (UMLS CUI [1,4])
CD8+ (rel): Before SARS-CoV-2 detection
Code List
HIV viral load: Before SARS-CoV-2 detection
CL Item
< 50 copies / ml (1)
CL Item
>= 50 copies / ml (2)
CL Item
Unknown (3)
CL Item
Not done (4)
Item
HIV viral load: Baseline (at SARS-CoV-2 detection)
integer
C1168369 (UMLS CUI [1,1])
C1442488 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C1511790 (UMLS CUI [1,4])
CD8+ (rel): Baseline (at SARS-CoV-2 detection)
Code List
HIV viral load: Baseline (at SARS-CoV-2 detection)
CL Item
< 50 copies / ml (1)
CL Item
>= 50 copies / ml (2)
CL Item
Unknown (3)
CL Item
Not done (4)
Item
HIV viral load: Uncomplicated phase
integer
C1168369 (UMLS CUI [1,1])
C0443334 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (rel): Uncomplicated phase
Code List
HIV viral load: Uncomplicated phase
CL Item
< 50 copies / ml (1)
CL Item
>= 50 copies / ml (2)
CL Item
Unknown (3)
CL Item
Not done (4)
Item
HIV viral load: Complicated phase
integer
C1168369 (UMLS CUI [1,1])
C0231242 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (rel): Complicated phase
Code List
HIV viral load: Complicated phase
CL Item
< 50 copies / ml (1)
CL Item
>= 50 copies / ml (2)
CL Item
Unknown (3)
CL Item
Not done (4)
Item
HIV viral load: Critical phase
integer
C1168369 (UMLS CUI [1,1])
C1511545 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (rel): Critical phase
Code List
HIV viral load: Critical phase
CL Item
< 50 copies / ml (1)
CL Item
>= 50 copies / ml (2)
CL Item
Unknown (3)
CL Item
Not done (4)
Item
HIV viral load: Recovery phase
integer
C1168369 (UMLS CUI [1,1])
C2004454 (UMLS CUI [1,2])
C0205390 (UMLS CUI [1,3])
CD8+ (rel): Recovery phase
Code List
HIV viral load: Recovery phase
CL Item
< 50 copies / ml (1)
CL Item
>= 50 copies / ml (2)
CL Item
Unknown (3)
CL Item
Not done (4)
Item Group
Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
C0029118 (UMLS CUI-1)
C0740830 (UMLS CUI-2)
C0036916 (UMLS CUI-3)
C5203670 (UMLS CUI-4)
Item
Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
integer
C0029118 (UMLS CUI [1,1])
C5203670 (UMLS CUI [1,2])
C0740830 (UMLS CUI [2,1])
C5203670 (UMLS CUI [2,2])
C0036916 (UMLS CUI [3,1])
C5203670 (UMLS CUI [3,2])
Opportunistic infections, AIDS-defining illnesses, STI during SARS-CoV-2
Code List
Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
CL Item
Yes (1)
CL Item
No (2)
CL Item
Unknown (3)
Indicate opportunistic infections, AIDS-defining illnesses, STI during COVID-19
Item
Indicate opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection):
text
C1521902 (UMLS CUI [1,1])
C0029118 (UMLS CUI [1,2])
C5203670 (UMLS CUI [1,3])
C1521902 (UMLS CUI [2,1])
C0740830 (UMLS CUI [2,2])
C5203670 (UMLS CUI [2,3])
C1521902 (UMLS CUI [3,1])
C0036916 (UMLS CUI [3,2])
C5203670 (UMLS CUI [3,3])
Item Group
Is data entry for this section finished?
C4684556 (UMLS CUI-1)
C1828479 (UMLS CUI-2)
C0205197 (UMLS CUI-3)
Item
Is data entry for this section finished?
integer
C4684556 (UMLS CUI [1,1])
C1828479 (UMLS CUI [1,2])
C0205197 (UMLS CUI [1,3])
BL_Completed
Code List
Is data entry for this section finished?
CL Item
Yes (1)
CL Item
No (2)
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