ID

42374

Description

Study Title: LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients https://leoss.net Study Indication: COVID-19 Date: 21.03.2021 Published with permission by Prof. Dr. med. J.-J. Vehreschild. LEOSS, a multi-center cohort study, has been created to get more in-depth knowledge about the epidemiology and clinical course of patients infected with SARS-CoV-2. Initiated by the ESCMID Emerging Infections Task Force (EITaF) and the German Infectious Disease Society, and supported by all German Centers for Health Research (DZG), LEOSS has developed into an international network of contributors. Via an integrative research approach with anonymous recruitment and collection of routine data in an open science context, LEOSS is building a uniform clinical dataset and providing real-time analyses. For more information feel free to explore https://leoss.net/. This document is for the pulmonary sub-cohort. If a text field can't be filled out, note 'ND'.

Link

https://leoss.net

Keywords

  1. 11/27/20 11/27/20 -
  2. 7/1/21 7/1/21 -
Copyright Holder

LEOSS

Uploaded on

July 1, 2021

DOI

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License

Creative Commons BY 4.0

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LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients

Pulmonary sub-cohort

  1. StudyEvent: ODM
    1. Pulmonary sub-cohort
Chronic pulmonary disease: other than asthma and copd
Description

Chronic pulmonary disease: other than asthma and copd

Alias
UMLS CUI-1
C0205394
UMLS CUI-2
C0746102
UMLS CUI-3
C0332300
UMLS CUI-4
C0004096
UMLS CUI-5
C0024117
Cystic Fibrosis
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1]
C0010674
OHS (Obesity hypoventilation syndrome)
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1]
C4268182
OSAS (Obstructive Sleep Apnoea Syndrome)
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1]
C0520679
Pulmonary fibrosis
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1]
C0034069
Pulmonary hypertension
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1]
C0020542
Sarcoidosis
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1]
C0036202
Chronic bronchitis
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma)

Data type

boolean

Alias
UMLS CUI [1]
C0008677
Emphysema
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1]
C0034067
Other
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0746102
Indicate other chronic pulmonary disease
Description

Indicate other chronic pulmonary disease

Data type

text

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0746102
UMLS CUI [1,3]
C1521902
Unknown
Description

Unknown chronic pulmonary disease

Data type

boolean

Alias
UMLS CUI [1,1]
C0746102
UMLS CUI [1,2]
C0439673
None
Description

Please specify the indicated other chronic pulmonary disease (not COPD or Asthma).

Data type

boolean

Alias
UMLS CUI [1,1]
C0549184
UMLS CUI [1,2]
C0746102
Has there been a ventilation/oxygen support before SARS-CoV-2 detection?
Description

Has there been a ventilation/oxygen support before SARS-CoV-2 detection?

Alias
UMLS CUI-1
C3872899
UMLS CUI-2
C0554804
UMLS CUI-3
C1442488
UMLS CUI-4
C0332152
UMLS CUI-5
C5203676
CPAP (Continuous positive airway pressure)
Description

CPAP before SARS-CoV-2 Detection

Data type

boolean

Alias
UMLS CUI [1,1]
C0199451
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C5203676
LTOT (Long-term oxygen therapy)
Description

LTOT before SARS-CoV-2 Detection

Data type

boolean

Alias
UMLS CUI [1,1]
C0418996
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C5203676
NIV (Non invasive ventilation)
Description

NIV before SARS-CoV-2 Detection

Data type

boolean

Alias
UMLS CUI [1,1]
C1997883
UMLS CUI [1,2]
C0332152
UMLS CUI [1,3]
C5203676
Other prior ventilation/oxygen support
Description

Other ventilation/oxygen support before SARS-CoV-2 Detection

Data type

boolean

Alias
UMLS CUI [1,1]
C3872899
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203676
UMLS CUI [2,1]
C0554804
UMLS CUI [2,2]
C0205394
UMLS CUI [2,3]
C0332152
UMLS CUI [2,4]
C5203676
Indicate other prior ventilation/oxygen support
Description

Other prior ventilation/oxygen support

Data type

text

Alias
UMLS CUI [1,1]
C3872899
UMLS CUI [1,2]
C0205394
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1521902
UMLS CUI [2,1]
C0554804
UMLS CUI [2,2]
C0205394
UMLS CUI [2,3]
C0332152
UMLS CUI [2,4]
C5203676
UMLS CUI [2,5]
C1521902
Unknown
Description

Unknown ventilation/oxygen support before SARS-CoV-2 Detection

Data type

boolean

Alias
UMLS CUI [1,1]
C3872899
UMLS CUI [1,2]
C0439673
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1521902
UMLS CUI [2,1]
C0554804
UMLS CUI [2,2]
C0439673
UMLS CUI [2,3]
C0332152
UMLS CUI [2,4]
C5203676
UMLS CUI [2,5]
C1521902
No prior support
Description

No ventilation/oxygen support before SARS-CoV-2 Detection

Data type

boolean

Alias
UMLS CUI [1,1]
C3872899
UMLS CUI [1,2]
C0549184
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203676
UMLS CUI [1,5]
C1521902
UMLS CUI [2,1]
C0554804
UMLS CUI [2,2]
C0549184
UMLS CUI [2,3]
C0332152
UMLS CUI [2,4]
C5203676
UMLS CUI [2,5]
C1521902
Regular use of inhaler
Description

Regular use of inhaler

Alias
UMLS CUI-1
C0205272
UMLS CUI-2
C1524063
UMLS CUI-3
C0021461
No use of Inhaler
Description

No use of Inhaler

Data type

boolean

Alias
UMLS CUI [1,1]
C0549184
UMLS CUI [1,2]
C1524063
UMLS CUI [1,3]
C0021461
ICS (inhaled corticosteroids) monotherapy
Description

ICS

Data type

boolean

Alias
UMLS CUI [1,1]
C2065041
UMLS CUI [1,2]
C4763675
LABA (long-acting b-agonist) or LAMA (long-acting muscarinic antagonist) monotherapy
Description

LABA or LAMA monotherapy

Data type

boolean

Alias
UMLS CUI [1,1]
C4763675
UMLS CUI [1,2]
C3536829
UMLS CUI [1,3]
C0439591
UMLS CUI [2,1]
C4763675
UMLS CUI [2,2]
C0003385
UMLS CUI [2,3]
C0439591
ICS combination with LABA and/or LAMA
Description

ICS combination with LABA and/or LAMA

Data type

boolean

Alias
UMLS CUI [1,1]
C2065041
UMLS CUI [1,2]
C0205195
UMLS CUI [1,3]
C3536829
UMLS CUI [1,4]
C0439591
UMLS CUI [2,1]
C2065041
UMLS CUI [2,2]
C0205195
UMLS CUI [2,3]
C0003385
UMLS CUI [2,4]
C0439591
LABA and LAMA combination
Description

LABA and LAMA combination

Data type

boolean

Alias
UMLS CUI [1,1]
C0205195
UMLS CUI [1,2]
C3536829
UMLS CUI [1,3]
C0003385
UMLS CUI [1,4]
C0439591
Use of inhaler, but drug unknown
Description

Use of inhaler, drug unknown

Data type

boolean

Alias
UMLS CUI [1,1]
C1524063
UMLS CUI [1,2]
C0021461
UMLS CUI [1,3]
C0439673
UMLS CUI [1,4]
C0013227
Use of inhaler only on demand
Description

Use of inhaler, on demand

Data type

boolean

Alias
UMLS CUI [1,1]
C1524063
UMLS CUI [1,2]
C0021461
UMLS CUI [1,3]
C0441516
Unknown use of inhaler
Description

Use of inhaler, unknown

Data type

boolean

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C1524063
UMLS CUI [1,3]
C0021461
Last pulmonary function test before COVID-19 if available (Spirometry)
Description

Last pulmonary function test before COVID-19 if available (Spirometry)

Alias
UMLS CUI-1
C0024119
UMLS CUI-2
C1517741
UMLS CUI-3
C0332152
UMLS CUI-4
C5203670
UMLS CUI-5
C0037981
Last pulmonary function test (Spirometry) before COVID-19
Description

Last pulmonary function test (Spirometry) before COVID-19

Data type

integer

Alias
UMLS CUI [1,1]
C0024119
UMLS CUI [1,2]
C1517741
UMLS CUI [1,3]
C0332152
UMLS CUI [1,4]
C5203670
UMLS CUI [2,1]
C0037981
UMLS CUI [2,2]
C1517741
UMLS CUI [2,3]
C0332152
UMLS CUI [2,4]
C5203670
Pulmonary function test at diagnosis (Spirometry):
Description

Pulmonary function test at diagnosis (Spirometry):

Alias
UMLS CUI-1
C0024119
UMLS CUI-2
C0011900
UMLS CUI-3
C5203670
UMLS CUI-4
C0037981
Pulmonary function test (Spirometry) at diagnosis of COVID-19
Description

Pulmonary function (Spirometrie) at diagnosis of COVID-19

Data type

integer

Alias
UMLS CUI [1,1]
C0024119
UMLS CUI [1,2]
C0011900
UMLS CUI [1,3]
C5203670
UMLS CUI [2,1]
C0037981
UMLS CUI [2,2]
C0011900
UMLS CUI [2,3]
C5203670
Is data entry for this section finished?
Description

Is data entry for this section finished?

Alias
UMLS CUI-1
C4684556
UMLS CUI-2
C1828479
UMLS CUI-3
C0205197
Is data entry for this section finished?
Description

Is data entry for this section finished?

Data type

integer

Alias
UMLS CUI [1,1]
C4684556
UMLS CUI [1,2]
C1828479
UMLS CUI [1,3]
C0205197

Similar models

Pulmonary sub-cohort

  1. StudyEvent: ODM
    1. Pulmonary sub-cohort
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Chronic pulmonary disease: other than asthma and copd
C0205394 (UMLS CUI-1)
C0746102 (UMLS CUI-2)
C0332300 (UMLS CUI-3)
C0004096 (UMLS CUI-4)
C0024117 (UMLS CUI-5)
Cystic Fibrosis
Item
Cystic Fibrosis
boolean
C0010674 (UMLS CUI [1])
OHS (Obesity hypoventilation syndrome)
Item
OHS (Obesity hypoventilation syndrome)
boolean
C4268182 (UMLS CUI [1])
OSAS (Obstructive Sleep Apnoea Syndrome)
Item
OSAS (Obstructive Sleep Apnoea Syndrome)
boolean
C0520679 (UMLS CUI [1])
Pulmonary fibrosis
Item
Pulmonary fibrosis
boolean
C0034069 (UMLS CUI [1])
Pulmonary hypertension
Item
Pulmonary hypertension
boolean
C0020542 (UMLS CUI [1])
Sarcoidosis
Item
Sarcoidosis
boolean
C0036202 (UMLS CUI [1])
Chronic bronchitis
Item
Chronic bronchitis
boolean
C0008677 (UMLS CUI [1])
Emphysema
Item
Emphysema
boolean
C0034067 (UMLS CUI [1])
Other chronic pulmonary disease
Item
Other
boolean
C0205394 (UMLS CUI [1,1])
C0746102 (UMLS CUI [1,2])
Indicate other chronic pulmonary disease
Item
Indicate other chronic pulmonary disease
text
C0205394 (UMLS CUI [1,1])
C0746102 (UMLS CUI [1,2])
C1521902 (UMLS CUI [1,3])
Unknown chronic pulmonary disease
Item
Unknown
boolean
C0746102 (UMLS CUI [1,1])
C0439673 (UMLS CUI [1,2])
Chronic pulmonary disease, none
Item
None
boolean
C0549184 (UMLS CUI [1,1])
C0746102 (UMLS CUI [1,2])
Item Group
Has there been a ventilation/oxygen support before SARS-CoV-2 detection?
C3872899 (UMLS CUI-1)
C0554804 (UMLS CUI-2)
C1442488 (UMLS CUI-3)
C0332152 (UMLS CUI-4)
C5203676 (UMLS CUI-5)
CPAP before SARS-CoV-2 Detection
Item
CPAP (Continuous positive airway pressure)
boolean
C0199451 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
LTOT before SARS-CoV-2 Detection
Item
LTOT (Long-term oxygen therapy)
boolean
C0418996 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
NIV before SARS-CoV-2 Detection
Item
NIV (Non invasive ventilation)
boolean
C1997883 (UMLS CUI [1,1])
C0332152 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
Other ventilation/oxygen support before SARS-CoV-2 Detection
Item
Other prior ventilation/oxygen support
boolean
C3872899 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C0554804 (UMLS CUI [2,1])
C0205394 (UMLS CUI [2,2])
C0332152 (UMLS CUI [2,3])
C5203676 (UMLS CUI [2,4])
Indicate other ventilation/oxygen support before SARS-CoV-2 Detection
Item
Indicate other prior ventilation/oxygen support
text
C3872899 (UMLS CUI [1,1])
C0205394 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1521902 (UMLS CUI [1,5])
C0554804 (UMLS CUI [2,1])
C0205394 (UMLS CUI [2,2])
C0332152 (UMLS CUI [2,3])
C5203676 (UMLS CUI [2,4])
C1521902 (UMLS CUI [2,5])
Unknown ventilation/oxygen support before SARS-CoV-2 Detection
Item
Unknown
boolean
C3872899 (UMLS CUI [1,1])
C0439673 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1521902 (UMLS CUI [1,5])
C0554804 (UMLS CUI [2,1])
C0439673 (UMLS CUI [2,2])
C0332152 (UMLS CUI [2,3])
C5203676 (UMLS CUI [2,4])
C1521902 (UMLS CUI [2,5])
No ventilation/oxygen support before SARS-CoV-2 Detection
Item
No prior support
boolean
C3872899 (UMLS CUI [1,1])
C0549184 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203676 (UMLS CUI [1,4])
C1521902 (UMLS CUI [1,5])
C0554804 (UMLS CUI [2,1])
C0549184 (UMLS CUI [2,2])
C0332152 (UMLS CUI [2,3])
C5203676 (UMLS CUI [2,4])
C1521902 (UMLS CUI [2,5])
Item Group
Regular use of inhaler
C0205272 (UMLS CUI-1)
C1524063 (UMLS CUI-2)
C0021461 (UMLS CUI-3)
No use of Inhaler
Item
No use of Inhaler
boolean
C0549184 (UMLS CUI [1,1])
C1524063 (UMLS CUI [1,2])
C0021461 (UMLS CUI [1,3])
ICS
Item
ICS (inhaled corticosteroids) monotherapy
boolean
C2065041 (UMLS CUI [1,1])
C4763675 (UMLS CUI [1,2])
LABA or LAMA monotherapy
Item
LABA (long-acting b-agonist) or LAMA (long-acting muscarinic antagonist) monotherapy
boolean
C4763675 (UMLS CUI [1,1])
C3536829 (UMLS CUI [1,2])
C0439591 (UMLS CUI [1,3])
C4763675 (UMLS CUI [2,1])
C0003385 (UMLS CUI [2,2])
C0439591 (UMLS CUI [2,3])
ICS combination with LABA and/or LAMA
Item
ICS combination with LABA and/or LAMA
boolean
C2065041 (UMLS CUI [1,1])
C0205195 (UMLS CUI [1,2])
C3536829 (UMLS CUI [1,3])
C0439591 (UMLS CUI [1,4])
C2065041 (UMLS CUI [2,1])
C0205195 (UMLS CUI [2,2])
C0003385 (UMLS CUI [2,3])
C0439591 (UMLS CUI [2,4])
LABA and LAMA combination
Item
LABA and LAMA combination
boolean
C0205195 (UMLS CUI [1,1])
C3536829 (UMLS CUI [1,2])
C0003385 (UMLS CUI [1,3])
C0439591 (UMLS CUI [1,4])
Use of inhaler, drug unknown
Item
Use of inhaler, but drug unknown
boolean
C1524063 (UMLS CUI [1,1])
C0021461 (UMLS CUI [1,2])
C0439673 (UMLS CUI [1,3])
C0013227 (UMLS CUI [1,4])
Use of inhaler, on demand
Item
Use of inhaler only on demand
boolean
C1524063 (UMLS CUI [1,1])
C0021461 (UMLS CUI [1,2])
C0441516 (UMLS CUI [1,3])
Use of inhaler, unknown
Item
Unknown use of inhaler
boolean
C0439673 (UMLS CUI [1,1])
C1524063 (UMLS CUI [1,2])
C0021461 (UMLS CUI [1,3])
Item Group
Last pulmonary function test before COVID-19 if available (Spirometry)
C0024119 (UMLS CUI-1)
C1517741 (UMLS CUI-2)
C0332152 (UMLS CUI-3)
C5203670 (UMLS CUI-4)
C0037981 (UMLS CUI-5)
Item
Last pulmonary function test (Spirometry) before COVID-19
integer
C0024119 (UMLS CUI [1,1])
C1517741 (UMLS CUI [1,2])
C0332152 (UMLS CUI [1,3])
C5203670 (UMLS CUI [1,4])
C0037981 (UMLS CUI [2,1])
C1517741 (UMLS CUI [2,2])
C0332152 (UMLS CUI [2,3])
C5203670 (UMLS CUI [2,4])
Code List
Last pulmonary function test (Spirometry) before COVID-19
CL Item
FEV1 > 80 % (1)
CL Item
FEV1 60 - 80% (2)
CL Item
FEV1 40 - 59 % (3)
CL Item
FEV1 <40% (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item Group
Pulmonary function test at diagnosis (Spirometry):
C0024119 (UMLS CUI-1)
C0011900 (UMLS CUI-2)
C5203670 (UMLS CUI-3)
C0037981 (UMLS CUI-4)
Item
Pulmonary function test (Spirometry) at diagnosis of COVID-19
integer
C0024119 (UMLS CUI [1,1])
C0011900 (UMLS CUI [1,2])
C5203670 (UMLS CUI [1,3])
C0037981 (UMLS CUI [2,1])
C0011900 (UMLS CUI [2,2])
C5203670 (UMLS CUI [2,3])
Code List
Pulmonary function test (Spirometry) at diagnosis of COVID-19
CL Item
FEV1 > 80 % (1)
CL Item
FEV1 60 - 80% (2)
CL Item
FEV1 40 - 59 % (3)
CL Item
FEV1 <40% (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item Group
Is data entry for this section finished?
C4684556 (UMLS CUI-1)
C1828479 (UMLS CUI-2)
C0205197 (UMLS CUI-3)
Item
Is data entry for this section finished?
integer
C4684556 (UMLS CUI [1,1])
C1828479 (UMLS CUI [1,2])
C0205197 (UMLS CUI [1,3])
Code List
Is data entry for this section finished?
CL Item
Yes (1)
CL Item
No (2)

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