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42265

Description

Study Title: LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients https://leoss.net Study Indication: COVID-19 Date: 19.03.2021 Published with permission by Prof. Dr. med. J.-J. Vehreschild. LEOSS, a multi-center cohort study, has been created to get more in-depth knowledge about the epidemiology and clinical course of patients infected with SARS-CoV-2. Initiated by the ESCMID Emerging Infections Task Force (EITaF) and the German Infectious Disease Society, and supported by all German Centers for Health Research (DZG), LEOSS has developed into an international network of contributors. Via an integrative research approach with anonymous recruitment and collection of routine data in an open science context, LEOSS is building a uniform clinical dataset and providing real-time analyses. For more information feel free to explore https://leoss.net/. This document is for the HIV sub-cohort. All questions refer to the day of diagnosis (diagnosis means first positive virus result). Please note that only cases with known outcome are collected at LEOSS! If a text field can't be filled out, note 'ND' (for not determined).

Link

https://leoss.net

Keywords

Versions (3)
  1. 11/13/20 11/13/20 -
  2. 11/27/20 11/27/20 -
  3. 4/24/21 4/24/21 -
Copyright Holder

LEOSS

Uploaded on

April 24, 2021

DOI

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License

Creative Commons BY 4.0
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    LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients

    English

    HIV sub-cohort

    1 forms  
    1. StudyEvent: ODM
      1. HIV sub-cohort
    HIV transmission risk
    Description

    HIV transmission risk

    Alias
    UMLS CUI-1
    C0019682
    UMLS CUI-2
    C0035648
    UMLS CUI-3
    C1443844
    Men having sex with men
    Description

    Men having sex with men

    Data type

    boolean

    Alias
    UMLS CUI [1]
    C2827413
    Heterosexual contacts
    Description

    Heterosexual contacts

    Data type

    boolean

    Alias
    UMLS CUI [1]
    C4272228
    Injection drug use
    Description

    Injection drug use

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0086190
    UMLS CUI [1,2]
    C1272883
    Patient from an endemic area
    Description

    Patient from HIV endemic area

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C3258107
    UMLS CUI [1,2]
    C0277550
    UMLS CUI [1,3]
    C0019682
    Blood transfusion (excl. Haemophilia)
    Description

    Blood transfusion (excl. Haemophilia)

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0005841
    UMLS CUI [1,2]
    C1705847
    UMLS CUI [1,3]
    C0684275
    Haemophilia
    Description

    Haemophilia

    Data type

    boolean

    Alias
    UMLS CUI [1]
    C0684275
    Other HIV transmission risk
    Description

    Other HIV transmission risk

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0019682
    UMLS CUI [1,2]
    C0035648
    UMLS CUI [1,3]
    C1443844
    UMLS CUI [1,4]
    C0205394
    Indicate other HIV transmission risk:
    Description

    Indicate other HIV transmission risk

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0019682
    UMLS CUI [1,2]
    C0035648
    UMLS CUI [1,3]
    C1443844
    UMLS CUI [1,4]
    C0205394
    UMLS CUI [1,5]
    C1521902
    Unknown HIV transmission risk
    Description

    Unknown HIV transmission risk

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0439673
    UMLS CUI [1,2]
    C0035648
    UMLS CUI [1,3]
    C1443844
    UMLS CUI [1,4]
    C0205394
    Does the patient receive current antiretroviral therapy?
    Description

    Does the patient receive current antiretroviral therapy?

    Alias
    UMLS CUI-1
    C1963724
    UMLS CUI-2
    C0521116
    Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
    Description

    Current in this context means at the time of first SARS-CoV-2 detection.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0521116
    UMLS CUI [1,2]
    C0162714
    UMLS CUI [2,1]
    C0521116
    UMLS CUI [2,2]
    C0674432
    UMLS CUI [3,1]
    C0521116
    UMLS CUI [3,2]
    C0292818
    UMLS CUI [4,1]
    C0521116
    UMLS CUI [4,2]
    C1435444
    UMLS CUI [5,1]
    C0521116
    UMLS CUI [5,2]
    C1145759
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    Description

    Current in this context means at the time of first SARS-CoV-2 detection.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0521116
    UMLS CUI [1,2]
    C0376601
    UMLS CUI [2,1]
    C0521116
    UMLS CUI [2,2]
    C1871526
    UMLS CUI [3,1]
    C0521116
    UMLS CUI [3,2]
    C3253985
    UMLS CUI [4,1]
    C0521116
    UMLS CUI [4,2]
    C4507568
    UMLS CUI [5,1]
    C0521116
    UMLS CUI [5,2]
    C2606637
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Description

    Current in this context means at the time of first SARS-CoV-2 detection.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0521116
    UMLS CUI [1,2]
    C3541376
    UMLS CUI [2,1]
    C0521116
    UMLS CUI [2,2]
    C0674428
    UMLS CUI [3,1]
    C0521116
    UMLS CUI [3,2]
    C0132326
    UMLS CUI [4,1]
    C0521116
    UMLS CUI [4,2]
    C1566826
    UMLS CUI [5,1]
    C0521116
    UMLS CUI [5,2]
    C4045491
    Nucleoside analog reverse-transcriptase inhibitors
    Description

    Current in this context means at the time of first SARS-CoV-2 detection.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0521116
    UMLS CUI [1,2]
    C3537103
    Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
    Description

    Current in this context means at the time of first SARS-CoV-2 detection.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0521116
    UMLS CUI [1,2]
    C1449715
    UMLS CUI [2,1]
    C0521116
    UMLS CUI [2,2]
    C1667052
    UMLS CUI [3,1]
    C0521116
    UMLS CUI [3,2]
    C0537439
    In case of antiretroviral therapy for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
    Description

    In case of antiretroviral therapy for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?

    Alias
    UMLS CUI-1
    C1963724
    UMLS CUI-2
    C0449238
    UMLS CUI-3
    C0332152
    UMLS CUI-4
    C5203676
    UMLS CUI-5
    C1511790
    In case of antiretroviral therapy: for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
    Description

    Please indicate the number of months antiretroviral therapy had been taken.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1963724
    UMLS CUI [1,2]
    C0449238
    UMLS CUI [1,3]
    C0332152
    UMLS CUI [1,4]
    C5203676
    UMLS CUI [1,5]
    C1511790
    Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
    Description

    Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?

    Alias
    UMLS CUI-1
    C1963724
    UMLS CUI-2
    C3665894
    UMLS CUI-3
    C1704686
    UMLS CUI-5
    C0347984
    UMLS CUI-6
    C5203670
    Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
    Description

    Antiretroviral therapy changed / started during SARS-Cov-2 infection

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1963724
    UMLS CUI [1,2]
    C3665894
    UMLS CUI [1,3]
    C0347984
    UMLS CUI [1,4]
    C5203670
    UMLS CUI [2,1]
    C1963724
    UMLS CUI [2,2]
    C1704686
    UMLS CUI [2,3]
    C0347984
    UMLS CUI [2,4]
    C5203670
    Please indicate the regimen at the end of the follow-up period
    Description

    Please indicate the regimen at the end of the follow-up period

    Alias
    UMLS CUI-1
    C1963724
    UMLS CUI-2
    C1276413
    UMLS CUI-3
    C1522577
    UMLS CUI-4
    C0444930
    Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
    Description

    In case no changes have been implemented, please name the original substances (as indicated in the question above).

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1522577
    UMLS CUI [1,2]
    C0444930
    UMLS CUI [1,3]
    C0162714
    UMLS CUI [2,1]
    C1522577
    UMLS CUI [2,2]
    C0444930
    UMLS CUI [2,3]
    C0674432
    UMLS CUI [3,1]
    C1522577
    UMLS CUI [3,2]
    C0444930
    UMLS CUI [3,3]
    C0292818
    UMLS CUI [4,1]
    C1522577
    UMLS CUI [4,2]
    C0444930
    UMLS CUI [4,3]
    C1435444
    UMLS CUI [5,1]
    C1522577
    UMLS CUI [5,2]
    C0444930
    UMLS CUI [5,3]
    C1145759
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    Description

    In case no changes have been implemented, please name the original substances (as indicated in the question above).

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1522577
    UMLS CUI [1,2]
    C0444930
    UMLS CUI [1,3]
    C0376601
    UMLS CUI [2,1]
    C1522577
    UMLS CUI [2,2]
    C0444930
    UMLS CUI [2,3]
    C1871526
    UMLS CUI [3,1]
    C1522577
    UMLS CUI [3,2]
    C0444930
    UMLS CUI [3,3]
    C3253985
    UMLS CUI [4,1]
    C1522577
    UMLS CUI [4,2]
    C0444930
    UMLS CUI [4,3]
    C4507568
    UMLS CUI [5,1]
    C1522577
    UMLS CUI [5,2]
    C0444930
    UMLS CUI [5,3]
    C2606637
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Description

    In case no changes have been implemented, please name the original substances (as indicated in the question above).

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1522577
    UMLS CUI [1,2]
    C0444930
    UMLS CUI [1,3]
    C3541376
    UMLS CUI [2,1]
    C1522577
    UMLS CUI [2,2]
    C0444930
    UMLS CUI [2,3]
    C0674428
    UMLS CUI [3,1]
    C1522577
    UMLS CUI [3,2]
    C0444930
    UMLS CUI [3,3]
    C0132326
    UMLS CUI [4,1]
    C1522577
    UMLS CUI [4,2]
    C0444930
    UMLS CUI [4,3]
    C1566826
    UMLS CUI [5,1]
    C1522577
    UMLS CUI [5,2]
    C0444930
    UMLS CUI [5,3]
    C4045491
    Nucleoside analog reverse-transcriptase inhibitors
    Description

    In case no changes have been implemented, please name the original substances (as indicated in the question above).

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1522577
    UMLS CUI [1,2]
    C0444930
    UMLS CUI [1,3]
    C3537103
    Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
    Description

    In case no changes have been implemented, please name the original substances (as indicated in the question above).

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1522577
    UMLS CUI [1,2]
    C0444930
    UMLS CUI [1,3]
    C1449715
    UMLS CUI [2,1]
    C1522577
    UMLS CUI [2,2]
    C0444930
    UMLS CUI [2,3]
    C1667052
    UMLS CUI [3,1]
    C1522577
    UMLS CUI [3,2]
    C0444930
    UMLS CUI [3,3]
    C0537439
    CD4+ T-cell count (abs.)
    Description

    CD4+ T-cell count (abs.)

    Alias
    UMLS CUI-1
    C1277776
    CD4+ (abs): Before SARS-CoV-2 detection
    Description

    Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277776
    UMLS CUI [1,2]
    C0332152
    UMLS CUI [1,3]
    C5203676
    UMLS CUI [1,4]
    C1511790
    CD4+ (abs): Baseline (at SARS-CoV-2 detection)
    Description

    Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277776
    UMLS CUI [1,2]
    C1442488
    UMLS CUI [1,3]
    C5203676
    UMLS CUI [1,4]
    C1511790
    CD4+ (abs): Uncomplicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277776
    UMLS CUI [1,2]
    C0443334
    UMLS CUI [1,3]
    C0205390
    CD4+ (abs): Complicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277776
    UMLS CUI [1,2]
    C0231242
    UMLS CUI [1,3]
    C0205390
    CD4+ (abs): Critical phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277776
    UMLS CUI [1,2]
    C1511545
    UMLS CUI [1,3]
    C0205390
    CD4+ (abs): Recovery phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277776
    UMLS CUI [1,2]
    C2004454
    UMLS CUI [1,3]
    C0205390
    CD4+ T-cell count (rel.)
    Description

    CD4+ T-cell count (rel.)

    Alias
    UMLS CUI-1
    C2698595
    UMLS CUI-2
    C0205345
    CD4+ (rel): Before SARS-CoV-2 detection
    Description

    Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698595
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C0332152
    UMLS CUI [1,4]
    C5203676
    UMLS CUI [1,5]
    C1511790
    CD4+ (rel): Baseline (at SARS-CoV-2 detection)
    Description

    Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698595
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C1442488
    UMLS CUI [1,4]
    C5203676
    UMLS CUI [1,5]
    C1511790
    CD4+ (rel): Uncomplicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698595
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C0443334
    UMLS CUI [1,4]
    C0205390
    CD4+ (rel): Complicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698595
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C0231242
    UMLS CUI [1,4]
    C0205390
    CD4+ (rel): Critical phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698595
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C1511545
    UMLS CUI [1,4]
    C0205390
    CD4+ (rel): Recovery phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698595
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C2004454
    UMLS CUI [1,4]
    C0205390
    Please indicate the CDC stage at baseline
    Description

    Please indicate the CDC stage at baseline

    Alias
    UMLS CUI-1
    C1272816
    UMLS CUI-2
    C1442488
    Please indicate the CDC stage at baseline
    Description

    CDC stages are mainly defined by CD4 count (see figure on the following website), or stage-3-defining illness which can be revised at https://www.cdc.gov/mmwr/preview/mmwrhtml/rr6303a1.htm?s_cid=rr6303a1_e

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1272816
    UMLS CUI [1,2]
    C1442488
    CD8+ T-cell count (abs.)
    Description

    CD8+ T-cell count (abs.)

    Alias
    UMLS CUI-1
    C1277777
    CD8+ (abs): Before SARS-CoV-2 detection
    Description

    Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277777
    UMLS CUI [1,2]
    C0332152
    UMLS CUI [1,3]
    C5203676
    UMLS CUI [1,4]
    C1511790
    CD8+ (abs): Baseline (at SARS-CoV-2 detection)
    Description

    Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277777
    UMLS CUI [1,2]
    C1442488
    UMLS CUI [1,3]
    C5203676
    UMLS CUI [1,4]
    C1511790
    CD8+ (abs): Uncomplicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277777
    UMLS CUI [1,2]
    C0443334
    UMLS CUI [1,3]
    C0205390
    CD8+ (abs): Complicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277777
    UMLS CUI [1,2]
    C0231242
    UMLS CUI [1,3]
    C0205390
    CD8+ (abs): Critical phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277777
    UMLS CUI [1,2]
    C1511545
    UMLS CUI [1,3]
    C0205390
    CD8+ (abs): Recovery phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1277777
    UMLS CUI [1,2]
    C2004454
    UMLS CUI [1,3]
    C0205390
    CD8+ T-cell count (rel.)
    Description

    CD8+ T-cell count (rel.)

    Alias
    UMLS CUI-1
    C2698600
    UMLS CUI-2
    C0205345
    CD8+ (rel): Before SARS-CoV-2 detection
    Description

    Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698600
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C0332152
    UMLS CUI [1,4]
    C5203676
    UMLS CUI [1,5]
    C1511790
    CD8+ (rel): Baseline (at SARS-CoV-2 detection)
    Description

    Please indicate the lowest count at SARS-CoV-2 detection. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698600
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C1442488
    UMLS CUI [1,4]
    C5203676
    UMLS CUI [1,5]
    C1511790
    CD8+ (rel): Uncomplicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698600
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C0443334
    UMLS CUI [1,4]
    C0205390
    CD8+ (rel): Complicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698600
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C0231242
    UMLS CUI [1,4]
    C0205390
    CD8+ (rel): Critical phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698600
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C1511545
    UMLS CUI [1,4]
    C0205390
    CD8+ (rel): Recovery phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C2698600
    UMLS CUI [1,2]
    C0205345
    UMLS CUI [1,3]
    C2004454
    UMLS CUI [1,4]
    C0205390
    Viral load
    Description

    Viral load

    Alias
    UMLS CUI-1
    C1168369
    HIV viral load: Before SARS-CoV-2 detection
    Description

    Please indicate values as close to first positive SARS-CoV-2 testing as possible. If values were not determined within the last 6 months before diagnosis select not done. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1168369
    UMLS CUI [1,2]
    C0332152
    UMLS CUI [1,3]
    C5203676
    UMLS CUI [1,4]
    C1511790
    HIV viral load: Baseline (at SARS-CoV-2 detection)
    Description

    Please indicate the lowest count at SARS-CoV-2 detection.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1168369
    UMLS CUI [1,2]
    C1442488
    UMLS CUI [1,3]
    C5203676
    UMLS CUI [1,4]
    C1511790
    HIV viral load: Uncomplicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1168369
    UMLS CUI [1,2]
    C0443334
    UMLS CUI [1,3]
    C0205390
    HIV viral load: Complicated phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1168369
    UMLS CUI [1,2]
    C0231242
    UMLS CUI [1,3]
    C0205390
    HIV viral load: Critical phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1168369
    UMLS CUI [1,2]
    C1511545
    UMLS CUI [1,3]
    C0205390
    HIV viral load: Recovery phase
    Description

    Please indicate the lowest count during the whole phase. If no information is available select unknown.

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C1168369
    UMLS CUI [1,2]
    C2004454
    UMLS CUI [1,3]
    C0205390
    Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
    Description

    Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?

    Alias
    UMLS CUI-1
    C0029118
    UMLS CUI-2
    C0740830
    UMLS CUI-3
    C0036916
    UMLS CUI-4
    C5203670
    Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
    Description

    Opportunistic infections, AIDS-defining illnesses, STI during COVID-19

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C0029118
    UMLS CUI [1,2]
    C5203670
    UMLS CUI [2,1]
    C0740830
    UMLS CUI [2,2]
    C5203670
    UMLS CUI [3,1]
    C0036916
    UMLS CUI [3,2]
    C5203670
    Indicate opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection):
    Description

    Indicate opportunistic infections, AIDS-defining illnesses, STI during COVID-19

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C1521902
    UMLS CUI [1,2]
    C0029118
    UMLS CUI [1,3]
    C5203670
    UMLS CUI [2,1]
    C1521902
    UMLS CUI [2,2]
    C0740830
    UMLS CUI [2,3]
    C5203670
    UMLS CUI [3,1]
    C1521902
    UMLS CUI [3,2]
    C0036916
    UMLS CUI [3,3]
    C5203670
    Is data entry for this section finished?
    Description

    Is data entry for this section finished?

    Alias
    UMLS CUI-1
    C4684556
    UMLS CUI-2
    C1828479
    UMLS CUI-3
    C0205197
    Is data entry for this section finished?
    Description

    Is data entry for this section finished?

    Data type

    integer

    Alias
    UMLS CUI [1,1]
    C4684556
    UMLS CUI [1,2]
    C1828479
    UMLS CUI [1,3]
    C0205197
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    Similar models

    HIV sub-cohort

    1 forms
    1. StudyEvent: ODM
      1. HIV sub-cohort
    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    HIV transmission risk
    C0019682 (UMLS CUI-1)
    C0035648 (UMLS CUI-2)
    C1443844 (UMLS CUI-3)
    Men having sex with men
    Item
    Men having sex with men
    boolean
    C2827413 (UMLS CUI [1])
    Heterosexual contacts
    Item
    Heterosexual contacts
    boolean
    C4272228 (UMLS CUI [1])
    Injection drug use
    Item
    Injection drug use
    boolean
    C0086190 (UMLS CUI [1,1])
    C1272883 (UMLS CUI [1,2])
    Patient from HIV endemic area
    Item
    Patient from an endemic area
    boolean
    C3258107 (UMLS CUI [1,1])
    C0277550 (UMLS CUI [1,2])
    C0019682 (UMLS CUI [1,3])
    Blood transfusion (excl. Haemophilia)
    Item
    Blood transfusion (excl. Haemophilia)
    boolean
    C0005841 (UMLS CUI [1,1])
    C1705847 (UMLS CUI [1,2])
    C0684275 (UMLS CUI [1,3])
    Haemophilia
    Item
    Haemophilia
    boolean
    C0684275 (UMLS CUI [1])
    Other HIV transmission risk
    Item
    Other HIV transmission risk
    boolean
    C0019682 (UMLS CUI [1,1])
    C0035648 (UMLS CUI [1,2])
    C1443844 (UMLS CUI [1,3])
    C0205394 (UMLS CUI [1,4])
    Indicate other HIV transmission risk
    Item
    Indicate other HIV transmission risk:
    text
    C0019682 (UMLS CUI [1,1])
    C0035648 (UMLS CUI [1,2])
    C1443844 (UMLS CUI [1,3])
    C0205394 (UMLS CUI [1,4])
    C1521902 (UMLS CUI [1,5])
    Unknown HIV transmission risk
    Item
    Unknown HIV transmission risk
    boolean
    C0439673 (UMLS CUI [1,1])
    C0035648 (UMLS CUI [1,2])
    C1443844 (UMLS CUI [1,3])
    C0205394 (UMLS CUI [1,4])
    Item Group
    Does the patient receive current antiretroviral therapy?
    C1963724 (UMLS CUI-1)
    C0521116 (UMLS CUI-2)
    Item
    Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
    integer
    C0521116 (UMLS CUI [1,1])
    C0162714 (UMLS CUI [1,2])
    C0521116 (UMLS CUI [2,1])
    C0674432 (UMLS CUI [2,2])
    C0521116 (UMLS CUI [3,1])
    C0292818 (UMLS CUI [3,2])
    C0521116 (UMLS CUI [4,1])
    C1435444 (UMLS CUI [4,2])
    C0521116 (UMLS CUI [5,1])
    C1145759 (UMLS CUI [5,2])
    Gender
    Code List
    Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    integer
    C0521116 (UMLS CUI [1,1])
    C0376601 (UMLS CUI [1,2])
    C0521116 (UMLS CUI [2,1])
    C1871526 (UMLS CUI [2,2])
    C0521116 (UMLS CUI [3,1])
    C3253985 (UMLS CUI [3,2])
    C0521116 (UMLS CUI [4,1])
    C4507568 (UMLS CUI [4,2])
    C0521116 (UMLS CUI [5,1])
    C2606637 (UMLS CUI [5,2])
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    Code List
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    integer
    C0521116 (UMLS CUI [1,1])
    C3541376 (UMLS CUI [1,2])
    C0521116 (UMLS CUI [2,1])
    C0674428 (UMLS CUI [2,2])
    C0521116 (UMLS CUI [3,1])
    C0132326 (UMLS CUI [3,2])
    C0521116 (UMLS CUI [4,1])
    C1566826 (UMLS CUI [4,2])
    C0521116 (UMLS CUI [5,1])
    C4045491 (UMLS CUI [5,2])
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Code List
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Nucleoside analog reverse-transcriptase inhibitors
    integer
    C0521116 (UMLS CUI [1,1])
    C3537103 (UMLS CUI [1,2])
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Code List
    Nucleoside analog reverse-transcriptase inhibitors
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
    integer
    C0521116 (UMLS CUI [1,1])
    C1449715 (UMLS CUI [1,2])
    C0521116 (UMLS CUI [2,1])
    C1667052 (UMLS CUI [2,2])
    C0521116 (UMLS CUI [3,1])
    C0537439 (UMLS CUI [3,2])
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Code List
    Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item Group
    In case of antiretroviral therapy for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
    C1963724 (UMLS CUI-1)
    C0449238 (UMLS CUI-2)
    C0332152 (UMLS CUI-3)
    C5203676 (UMLS CUI-4)
    C1511790 (UMLS CUI-5)
    Item
    In case of antiretroviral therapy: for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
    integer
    C1963724 (UMLS CUI [1,1])
    C0449238 (UMLS CUI [1,2])
    C0332152 (UMLS CUI [1,3])
    C5203676 (UMLS CUI [1,4])
    C1511790 (UMLS CUI [1,5])
    undefined item
    Code List
    In case of antiretroviral therapy: for how long has antiretroviral therapy been taken before first positive SARS-CoV-2 testing?
    CL Item
    < 3 months (1)
    CL Item
    3 - 6 months (2)
    CL Item
    > 6 months (3)
    CL Item
    Unknown (4)
    CL Item
    No antiretroviral therapy (5)
    Item Group
    Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
    C1963724 (UMLS CUI-1)
    C3665894 (UMLS CUI-2)
    C1704686 (UMLS CUI-3)
    C0347984 (UMLS CUI-5)
    C5203670 (UMLS CUI-6)
    Item
    Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
    integer
    C1963724 (UMLS CUI [1,1])
    C3665894 (UMLS CUI [1,2])
    C0347984 (UMLS CUI [1,3])
    C5203670 (UMLS CUI [1,4])
    C1963724 (UMLS CUI [2,1])
    C1704686 (UMLS CUI [2,2])
    C0347984 (UMLS CUI [2,3])
    C5203670 (UMLS CUI [2,4])
    undefined item
    Code List
    Has antiretroviral therapy been changed / been started during the course of SARS-Cov-2 infection?
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item Group
    Please indicate the regimen at the end of the follow-up period
    C1963724 (UMLS CUI-1)
    C1276413 (UMLS CUI-2)
    C1522577 (UMLS CUI-3)
    C0444930 (UMLS CUI-4)
    Item
    Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
    integer
    C1522577 (UMLS CUI [1,1])
    C0444930 (UMLS CUI [1,2])
    C0162714 (UMLS CUI [1,3])
    C1522577 (UMLS CUI [2,1])
    C0444930 (UMLS CUI [2,2])
    C0674432 (UMLS CUI [2,3])
    C1522577 (UMLS CUI [3,1])
    C0444930 (UMLS CUI [3,2])
    C0292818 (UMLS CUI [3,3])
    C1522577 (UMLS CUI [4,1])
    C0444930 (UMLS CUI [4,2])
    C1435444 (UMLS CUI [4,3])
    C1522577 (UMLS CUI [5,1])
    C0444930 (UMLS CUI [5,2])
    C1145759 (UMLS CUI [5,3])
    Gender
    Code List
    Protease Inhibitors (Lopinavir; Ritonavir; Darunavir; Atazanavir)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    integer
    C1522577 (UMLS CUI [1,1])
    C0444930 (UMLS CUI [1,2])
    C0376601 (UMLS CUI [1,3])
    C1522577 (UMLS CUI [2,1])
    C0444930 (UMLS CUI [2,2])
    C1871526 (UMLS CUI [2,3])
    C1522577 (UMLS CUI [3,1])
    C0444930 (UMLS CUI [3,2])
    C3253985 (UMLS CUI [3,3])
    C1522577 (UMLS CUI [4,1])
    C0444930 (UMLS CUI [4,2])
    C4507568 (UMLS CUI [4,3])
    C1522577 (UMLS CUI [5,1])
    C0444930 (UMLS CUI [5,2])
    C2606637 (UMLS CUI [5,3])
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    Code List
    Integrase Inhibitors (Dolutegravir; Biktegravir; Raltegravir; Elvitegravir)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    integer
    C1522577 (UMLS CUI [1,1])
    C0444930 (UMLS CUI [1,2])
    C3541376 (UMLS CUI [1,3])
    C1522577 (UMLS CUI [2,1])
    C0444930 (UMLS CUI [2,2])
    C0674428 (UMLS CUI [2,3])
    C1522577 (UMLS CUI [3,1])
    C0444930 (UMLS CUI [3,2])
    C0132326 (UMLS CUI [3,3])
    C1522577 (UMLS CUI [4,1])
    C0444930 (UMLS CUI [4,2])
    C1566826 (UMLS CUI [4,3])
    C1522577 (UMLS CUI [5,1])
    C0444930 (UMLS CUI [5,2])
    C4045491 (UMLS CUI [5,3])
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Code List
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Nucleoside analog reverse-transcriptase inhibitors
    integer
    C1522577 (UMLS CUI [1,1])
    C0444930 (UMLS CUI [1,2])
    C3537103 (UMLS CUI [1,3])
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Code List
    Nucleoside analog reverse-transcriptase inhibitors
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
    integer
    C1522577 (UMLS CUI [1,1])
    C0444930 (UMLS CUI [1,2])
    C1449715 (UMLS CUI [1,3])
    C1522577 (UMLS CUI [2,1])
    C0444930 (UMLS CUI [2,2])
    C1667052 (UMLS CUI [2,3])
    C1522577 (UMLS CUI [3,1])
    C0444930 (UMLS CUI [3,2])
    C0537439 (UMLS CUI [3,3])
    Non-nucleoside reverse-transcriptase inhibitors (Efavirenz; Nevirapin; Rilpivirin; Doravirin)
    Code List
    Entry inhibitors (e.g. Maraviroc, Enfuvirtide)
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item Group
    CD4+ T-cell count (abs.)
    C1277776 (UMLS CUI-1)
    Item
    CD4+ (abs): Before SARS-CoV-2 detection
    integer
    C1277776 (UMLS CUI [1,1])
    C0332152 (UMLS CUI [1,2])
    C5203676 (UMLS CUI [1,3])
    C1511790 (UMLS CUI [1,4])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (abs): Before SARS-CoV-2 detection
    CL Item
    < 200 Cells / µL (1)
    CL Item
    200-500 Cells / µL (2)
    CL Item
    > 500 Cells / µL (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (abs): Baseline (at SARS-CoV-2 detection)
    integer
    C1277776 (UMLS CUI [1,1])
    C1442488 (UMLS CUI [1,2])
    C5203676 (UMLS CUI [1,3])
    C1511790 (UMLS CUI [1,4])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (abs): Baseline (at SARS-CoV-2 detection)
    CL Item
    < 200 Cells / µL (1)
    CL Item
    200-500 Cells / µL (2)
    CL Item
    > 500 Cells / µL (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (abs): Uncomplicated phase
    integer
    C1277776 (UMLS CUI [1,1])
    C0443334 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (abs): Uncomplicated phase
    CL Item
    < 200 Cells / µL (1)
    CL Item
    200-500 Cells / µL (2)
    CL Item
    > 500 Cells / µL (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (abs): Complicated phase
    integer
    C1277776 (UMLS CUI [1,1])
    C0231242 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (abs): Complicated phase
    CL Item
    < 200 Cells / µL (1)
    CL Item
    200-500 Cells / µL (2)
    CL Item
    > 500 Cells / µL (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (abs): Critical phase
    integer
    C1277776 (UMLS CUI [1,1])
    C1511545 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (abs): Critical phase
    CL Item
    < 200 Cells / µL (1)
    CL Item
    200-500 Cells / µL (2)
    CL Item
    > 500 Cells / µL (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (abs): Recovery phase
    integer
    C1277776 (UMLS CUI [1,1])
    C2004454 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (abs): Recovery phase
    CL Item
    < 200 Cells / µL (1)
    CL Item
    200-500 Cells / µL (2)
    CL Item
    > 500 Cells / µL (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item Group
    CD4+ T-cell count (rel.)
    C2698595 (UMLS CUI-1)
    C0205345 (UMLS CUI-2)
    Item
    CD4+ (rel): Before SARS-CoV-2 detection
    integer
    C2698595 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C0332152 (UMLS CUI [1,3])
    C5203676 (UMLS CUI [1,4])
    C1511790 (UMLS CUI [1,5])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (rel): Before SARS-CoV-2 detection
    CL Item
    < 14 % (1)
    CL Item
    14 - 25 % (2)
    CL Item
    > 25 % (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (rel): Baseline (at SARS-CoV-2 detection)
    integer
    C2698595 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C1442488 (UMLS CUI [1,3])
    C5203676 (UMLS CUI [1,4])
    C1511790 (UMLS CUI [1,5])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (rel): Baseline (at SARS-CoV-2 detection)
    CL Item
    < 14 % (1)
    CL Item
    14 - 25 % (2)
    CL Item
    > 25 % (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (rel): Uncomplicated phase
    integer
    C2698595 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C0443334 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (rel): Uncomplicated phase
    CL Item
    < 14 % (1)
    CL Item
    14 - 25 % (2)
    CL Item
    > 25 % (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (rel): Complicated phase
    integer
    C2698595 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C0231242 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (rel): Complicated phase
    CL Item
    < 14 % (1)
    CL Item
    14 - 25 % (2)
    CL Item
    > 25 % (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (rel): Critical phase
    integer
    C2698595 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C1511545 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (rel): Critical phase
    CL Item
    < 14 % (1)
    CL Item
    14 - 25 % (2)
    CL Item
    > 25 % (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD4+ (rel): Recovery phase
    integer
    C2698595 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C2004454 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    Before SARS-CoV-2 detection
    Code List
    CD4+ (rel): Recovery phase
    CL Item
    < 14 % (1)
    CL Item
    14 - 25 % (2)
    CL Item
    > 25 % (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item Group
    Please indicate the CDC stage at baseline
    C1272816 (UMLS CUI-1)
    C1442488 (UMLS CUI-2)
    Item
    Please indicate the CDC stage at baseline
    integer
    C1272816 (UMLS CUI [1,1])
    C1442488 (UMLS CUI [1,2])
    HIV CDC stage at baseline
    Code List
    Please indicate the CDC stage at baseline
    CL Item
    Stage 1 (1)
    CL Item
    Stage 2 (2)
    CL Item
    Stage 3 (3)
    CL Item
    Unknown (4)
    Item Group
    CD8+ T-cell count (abs.)
    C1277777 (UMLS CUI-1)
    Item
    CD8+ (abs): Before SARS-CoV-2 detection
    integer
    C1277777 (UMLS CUI [1,1])
    C0332152 (UMLS CUI [1,2])
    C5203676 (UMLS CUI [1,3])
    C1511790 (UMLS CUI [1,4])
    CD8+ (abs): Before SARS-CoV-2 detection
    Code List
    CD8+ (abs): Before SARS-CoV-2 detection
    CL Item
    < 250 cells / μl (1)
    CL Item
    250 - 1000 cells / μl (2)
    CL Item
    > 1000 cells / μl (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (abs): Baseline (at SARS-CoV-2 detection)
    integer
    C1277777 (UMLS CUI [1,1])
    C1442488 (UMLS CUI [1,2])
    C5203676 (UMLS CUI [1,3])
    C1511790 (UMLS CUI [1,4])
    CD8+ (abs): Baseline (at SARS-CoV-2 detection)
    Code List
    CD8+ (abs): Baseline (at SARS-CoV-2 detection)
    CL Item
    < 250 cells / μl (1)
    CL Item
    250 - 1000 cells / μl (2)
    CL Item
    > 1000 cells / μl (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (abs): Uncomplicated phase
    integer
    C1277777 (UMLS CUI [1,1])
    C0443334 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (abs): Uncomplicated phase
    Code List
    CD8+ (abs): Uncomplicated phase
    CL Item
    < 250 cells / μl (1)
    CL Item
    250 - 1000 cells / μl (2)
    CL Item
    > 1000 cells / μl (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (abs): Complicated phase
    integer
    C1277777 (UMLS CUI [1,1])
    C0231242 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (abs): Complicated phase
    Code List
    CD8+ (abs): Complicated phase
    CL Item
    < 250 cells / μl (1)
    CL Item
    250 - 1000 cells / μl (2)
    CL Item
    > 1000 cells / μl (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (abs): Critical phase
    integer
    C1277777 (UMLS CUI [1,1])
    C1511545 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (abs): Critical phase
    Code List
    CD8+ (abs): Critical phase
    CL Item
    < 250 cells / μl (1)
    CL Item
    250 - 1000 cells / μl (2)
    CL Item
    > 1000 cells / μl (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (abs): Recovery phase
    integer
    C1277777 (UMLS CUI [1,1])
    C2004454 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (abs): Recovery phase
    Code List
    CD8+ (abs): Recovery phase
    CL Item
    < 250 cells / μl (1)
    CL Item
    250 - 1000 cells / μl (2)
    CL Item
    > 1000 cells / μl (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item Group
    CD8+ T-cell count (rel.)
    C2698600 (UMLS CUI-1)
    C0205345 (UMLS CUI-2)
    Item
    CD8+ (rel): Before SARS-CoV-2 detection
    integer
    C2698600 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C0332152 (UMLS CUI [1,3])
    C5203676 (UMLS CUI [1,4])
    C1511790 (UMLS CUI [1,5])
    CD8+ (rel): Before SARS-CoV-2 detection
    Code List
    CD8+ (rel): Before SARS-CoV-2 detection
    CL Item
    < 15 % (1)
    CL Item
    15 - 40 % (2)
    CL Item
    > 40 %  (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (rel): Baseline (at SARS-CoV-2 detection)
    integer
    C2698600 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C1442488 (UMLS CUI [1,3])
    C5203676 (UMLS CUI [1,4])
    C1511790 (UMLS CUI [1,5])
    CD8+ (rel): Baseline (at SARS-CoV-2 detection)
    Code List
    CD8+ (rel): Baseline (at SARS-CoV-2 detection)
    CL Item
    < 15 % (1)
    CL Item
    15 - 40 % (2)
    CL Item
    > 40 %  (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (rel): Uncomplicated phase
    integer
    C2698600 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C0443334 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    CD8+ (rel): Uncomplicated phase
    Code List
    CD8+ (rel): Uncomplicated phase
    CL Item
    < 15 % (1)
    CL Item
    15 - 40 % (2)
    CL Item
    > 40 %  (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (rel): Complicated phase
    integer
    C2698600 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C0231242 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    CD8+ (rel): Complicated phase
    Code List
    CD8+ (rel): Complicated phase
    CL Item
    < 15 % (1)
    CL Item
    15 - 40 % (2)
    CL Item
    > 40 %  (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (rel): Critical phase
    integer
    C2698600 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C1511545 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    CD8+ (rel): Critical phase
    Code List
    CD8+ (rel): Critical phase
    CL Item
    < 15 % (1)
    CL Item
    15 - 40 % (2)
    CL Item
    > 40 %  (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item
    CD8+ (rel): Recovery phase
    integer
    C2698600 (UMLS CUI [1,1])
    C0205345 (UMLS CUI [1,2])
    C2004454 (UMLS CUI [1,3])
    C0205390 (UMLS CUI [1,4])
    CD8+ (rel): Recovery phase
    Code List
    CD8+ (rel): Recovery phase
    CL Item
    < 15 % (1)
    CL Item
    15 - 40 % (2)
    CL Item
    > 40 %  (3)
    CL Item
    Unknown (4)
    CL Item
    Not done (5)
    Item Group
    Viral load
    C1168369 (UMLS CUI-1)
    Item
    HIV viral load: Before SARS-CoV-2 detection
    integer
    C1168369 (UMLS CUI [1,1])
    C0332152 (UMLS CUI [1,2])
    C5203676 (UMLS CUI [1,3])
    C1511790 (UMLS CUI [1,4])
    CD8+ (rel): Before SARS-CoV-2 detection
    Code List
    HIV viral load: Before SARS-CoV-2 detection
    CL Item
    < 50 copies / ml (1)
    CL Item
    >= 50 copies / ml (2)
    CL Item
    Unknown (3)
    CL Item
    Not done (4)
    Item
    HIV viral load: Baseline (at SARS-CoV-2 detection)
    integer
    C1168369 (UMLS CUI [1,1])
    C1442488 (UMLS CUI [1,2])
    C5203676 (UMLS CUI [1,3])
    C1511790 (UMLS CUI [1,4])
    CD8+ (rel): Baseline (at SARS-CoV-2 detection)
    Code List
    HIV viral load: Baseline (at SARS-CoV-2 detection)
    CL Item
    < 50 copies / ml (1)
    CL Item
    >= 50 copies / ml (2)
    CL Item
    Unknown (3)
    CL Item
    Not done (4)
    Item
    HIV viral load: Uncomplicated phase
    integer
    C1168369 (UMLS CUI [1,1])
    C0443334 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (rel): Uncomplicated phase
    Code List
    HIV viral load: Uncomplicated phase
    CL Item
    < 50 copies / ml (1)
    CL Item
    >= 50 copies / ml (2)
    CL Item
    Unknown (3)
    CL Item
    Not done (4)
    Item
    HIV viral load: Complicated phase
    integer
    C1168369 (UMLS CUI [1,1])
    C0231242 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (rel): Complicated phase
    Code List
    HIV viral load: Complicated phase
    CL Item
    < 50 copies / ml (1)
    CL Item
    >= 50 copies / ml (2)
    CL Item
    Unknown (3)
    CL Item
    Not done (4)
    Item
    HIV viral load: Critical phase
    integer
    C1168369 (UMLS CUI [1,1])
    C1511545 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (rel): Critical phase
    Code List
    HIV viral load: Critical phase
    CL Item
    < 50 copies / ml (1)
    CL Item
    >= 50 copies / ml (2)
    CL Item
    Unknown (3)
    CL Item
    Not done (4)
    Item
    HIV viral load: Recovery phase
    integer
    C1168369 (UMLS CUI [1,1])
    C2004454 (UMLS CUI [1,2])
    C0205390 (UMLS CUI [1,3])
    CD8+ (rel): Recovery phase
    Code List
    HIV viral load: Recovery phase
    CL Item
    < 50 copies / ml (1)
    CL Item
    >= 50 copies / ml (2)
    CL Item
    Unknown (3)
    CL Item
    Not done (4)
    Item Group
    Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
    C0029118 (UMLS CUI-1)
    C0740830 (UMLS CUI-2)
    C0036916 (UMLS CUI-3)
    C5203670 (UMLS CUI-4)
    Item
    Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
    integer
    C0029118 (UMLS CUI [1,1])
    C5203670 (UMLS CUI [1,2])
    C0740830 (UMLS CUI [2,1])
    C5203670 (UMLS CUI [2,2])
    C0036916 (UMLS CUI [3,1])
    C5203670 (UMLS CUI [3,2])
    Opportunistic infections, AIDS-defining illnesses, STI during SARS-CoV-2
    Code List
    Did any opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection) occur during SARS-CoV-2 infection?
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Indicate opportunistic infections, AIDS-defining illnesses, STI during COVID-19
    Item
    Indicate opportunistic infections, AIDS-defining illnesses or STI (sexually transmitted infection):
    text
    C1521902 (UMLS CUI [1,1])
    C0029118 (UMLS CUI [1,2])
    C5203670 (UMLS CUI [1,3])
    C1521902 (UMLS CUI [2,1])
    C0740830 (UMLS CUI [2,2])
    C5203670 (UMLS CUI [2,3])
    C1521902 (UMLS CUI [3,1])
    C0036916 (UMLS CUI [3,2])
    C5203670 (UMLS CUI [3,3])
    Item Group
    Is data entry for this section finished?
    C4684556 (UMLS CUI-1)
    C1828479 (UMLS CUI-2)
    C0205197 (UMLS CUI-3)
    Item
    Is data entry for this section finished?
    integer
    C4684556 (UMLS CUI [1,1])
    C1828479 (UMLS CUI [1,2])
    C0205197 (UMLS CUI [1,3])
    BL_Completed
    Code List
    Is data entry for this section finished?
    CL Item
    Yes (1)
    CL Item
    No (2)
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