ID

41651

Description

Study Title: LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients https://leoss.net Study Indication: COVID-19 Date: 14.10.2020, 16:54 Published with permission by Prof. Dr. med. J.-J. Vehreschild. LEOSS is mandated by the ESCMID Emerging Infections Task Force (EITaF) and supported by the German Infectious Disease Society. It aims at a better understanding of the implications of the new virus on patients by systematically documenting patient data across Europe (Text adapted from leoss.net). For more information please visit the official website. This document is for baseline information and it contains the general virological and laboratory findings for all phases. It is closely related to Baseline I where further information is collected. Please keep in mind that the clinical phases represent time intervals while the baseline is a point in time. Data input of baseline and the clinical phase at diagnosis can but do not have to be identical. If a text field can't be filled out, note 'ND' (for not determined)

Link

https://leoss.net

Keywords

Versions (4)
  1. 11/13/20 11/13/20 -
  2. 11/20/20 11/20/20 -
  3. 12/4/20 12/4/20 - Sarah Riepenhausen
  4. 6/8/21 6/8/21 -
Copyright Holder

LEOSS

Uploaded on

December 4, 2020

DOI

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License

Creative Commons BY 4.0
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LEOSS: Lean European Open Survey on SARS-CoV-2 Infected Patients

English

Baseline II (General virological and laboratory findings for all phases)

1 forms  
Baseline: Types of virological testing
Description

Baseline: Types of virological testing

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C0599616
UMLS CUI-3
C0332307
PCR
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken.

Data type

integer

Alias
UMLS CUI [1]
C0032520
Rapid test
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

integer

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
Rapid test, please specify
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

text

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
UMLS CUI [1,3]
C1521902
Serology
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken.

Data type

integer

Alias
UMLS CUI [1]
C0036743
None
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken.

Data type

integer

Alias
UMLS CUI [1,1]
C1298908
UMLS CUI [1,2]
C0599616
Unknown
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken.

Data type

integer

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0599616
Baseline: PCR: Site of first detected SARS-CoV-2
Description

Baseline: PCR: Site of first detected SARS-CoV-2

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C0032520
UMLS CUI-3
C0205265
UMLS CUI-4
C0011900
UMLS CUI-5
C0205145
UMLS CUI-6
C5203676
Blood
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0005767
Earlobe capillary blood
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0229315
UMLS CUI [1,2]
C0229666
Bronchoalveolar lavage
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1535502
Cerebro-spinal fluid
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0007806
Conjunctival swab
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C2266654
Nasopharynx swab
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C3669207
Organ biopsy
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0005558
UMLS CUI [1,2]
C0178784
Oropharynx swab
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C2014100
Pharyngeal fluid specimen
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0031354
UMLS CUI [1,2]
C1704353
Sputum
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0038056
Stool
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015733
Tracheal aspirate
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1547923
Urine
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. First refers to the date the sample was taken In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0042036
Baseline: PCR: Tested target at first positive SARS-CoV-2 testing
Description

Baseline: PCR: Tested target at first positive SARS-CoV-2 testing

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C0032520
UMLS CUI-3
C1521840
UMLS CUI-4
C0205435
UMLS CUI-5
C1446409
UMLS CUI-6
C0032520
UMLS CUI-7
C0039593
E gene
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1,1]
C5380597
UMLS CUI [1,2]
C5203676
M gene
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1,1]
C5391474
UMLS CUI [1,2]
C0017337
N gene
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1]
C5380593
S gene
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1]
C5380716
RdRp gene
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1]
C5380596
ORF1ab gene
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1]
C5380670
Other
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1,1]
C0205394
UMLS CUI [1,2]
C0032520
UMLS CUI [1,3]
C1521840
Other, please specify
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1,1]
C3845569
UMLS CUI [1,2]
C0032520
UMLS CUI [1,3]
C1521840
Unknown
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Baseline The tested target is the gene which is addressed via PCR (not the virus types L / S)

Data type

integer

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0032520
UMLS CUI [1,3]
C1521840
Baseline: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Baseline: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C0599161
UMLS CUI-3
C5203074
UMLS CUI-4
C5203676
UMLS CUI-5
C0439056
UMLS CUI-6
C0449243
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken.

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
If Swab positive, number of cycles:
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken.

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
UMLS CUI [1,6]
C2348235
Baseline: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Baseline: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C5397186
UMLS CUI-3
C0474643
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
If IgG-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C2348235
Baseline: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Baseline: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C5203676
UMLS CUI-3
C0474643
UMLS CUI-4
C0020835
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
If IgA-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
UMLS CUI [1,4]
C2348235
Baseline: Laboratory values
Description

Baseline: Laboratory values

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C1254595
GOT/AST
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201899
GPT/ALT
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201836
Gamma-GT
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202035
Bilirubine
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0344395
Lipase
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0373670
Troponine T
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523952
Creatinine
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201975
Urea
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523961
LDH
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202113
D-dimer
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C2826333
Fibrinogen
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0337428
Triglyceride
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202236
LDL
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428474
HDL
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428472
Serum albumin
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR. If values were not determined within the first 48 hours, report as "not done" (e.g. positive screening test -> 3 days home quarantine -> hospital admission and first blood sample -> select not done). You will have the opportunity to document further values later. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523465
Baseline: Hematological Values
Description

Baseline: Hematological Values

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C0018941
Leukocytes
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0023508
Lymphocytes
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0200635
Neutrophils
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0200633
Platelets
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later. (SI unit: nl => x1,000)

Data type

integer

Alias
UMLS CUI [1]
C0032181
Hemoglobin
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later. (SI unit: mmol/l)

Data type

integer

Alias
UMLS CUI [1]
C0518015
Eosinophils
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0200638
Baseline: Other laboratory results
Description

Baseline: Other laboratory results

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C1254595
UMLS CUI-3
C0205394
CRP
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Unit: mg/L (multiply by 10 if your lab uses mg/dL). Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0201657
Procalcitonin (PCT)
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Unit: ng/ml = ug/l. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C1535922
Interleukin 6
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Unit: pg/mL ≙ ng/l. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0919829
sIL2R
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C4764096
Ferritin
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Unit: μg/L ≙ ng/ml. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0373607
INR
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0525032
Activated partial thromboplastin time (aPTT)
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0030605
CK (Creatine Kinase)
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later. Unit: U/L . (SI unit: nmol/(s l) in brackets).

Data type

integer

Alias
UMLS CUI [1]
C0201973
CK-MB in reference to above indicated CK
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate the percentage of total CK referring to the above indicated CK value. If CK-MB was not determined in reference to the above indicated CK, report as "not done".

Data type

integer

Alias
UMLS CUI [1]
C0428616
NT-pro-BNP
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Unit: pg/ml conversion pg/ml x 0,118 = pmol/l x 8,457 = pg/ml. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C3272900
Antithrombin III activity
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done". You will have the opportunity to document further values later.

Data type

integer

Alias
UMLS CUI [1]
C0200416
TSH
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the first positive PCR-diagnosis. If values were not determined within the first 48 hours, report as "not done".

Data type

integer

Alias
UMLS CUI [1]
C0202230
25-Hydroxyvitamin D
Description

Note: This question is critical for the further course of the questionnaire. Lowest level since diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C2984945
Baseline: Urine test strips
Description

Baseline: Urine test strips

Alias
UMLS CUI-1
C1442488
UMLS CUI-2
C0430370
Leukocytes
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C1256582
Nitrite
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C0580333
Total protein
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C0428541
Erys / Hemoglobin
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C2188659
UMLS CUI [2]
C0236439
Glucose
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C0430376
Ketone bodies
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C0555179
Bilirubin
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C0430374
Urobilinogen
Description

Note: This question is critical for the further course of the questionnaire. Baseline is defined as the day the sample of the first positive SARS-CoV-2 result was taken. Please indicate values determined closest to the diagnosis.

Data type

integer

Alias
UMLS CUI [1]
C0427736
Uncomplicated phase: Types of virological testing
Description

Uncomplicated phase: Types of virological testing

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C0599616
UMLS CUI-4
C0332307
PCR
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0032520
Rapid test
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

integer

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
Rapid test, please specify
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

text

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
UMLS CUI [1,3]
C1521902
Serology
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0036743
None
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C1298908
UMLS CUI [1,2]
C0599616
Unknown
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0599616
Uncomplicated phase: PCR: Sites of virological testing
Description

Uncomplicated phase: PCR: Sites of virological testing

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C0032520
UMLS CUI-4
C0011900
UMLS CUI-5
C0205145
UMLS CUI-6
C5203676
UMLS CUI-7
C0599616
Blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0005767
Earlobe capillary blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0229315
UMLS CUI [1,2]
C0229666
Bronchoalveolar lavage
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1535502
Cerebro-spinal fluid
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0007806
Eyes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015392
Nasopharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0027442
Organ biopsy
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0005558
UMLS CUI [1,2]
C0178784
Oropharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1280659
Pharyngeal fluid specimen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0031354
UMLS CUI [1,2]
C1704353
Sputum
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0038056
Stool
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015733
Tracheal aspirate
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1547923
Urine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0042036
Uncomplicated phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Uncomplicated phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C0599161
UMLS CUI-4
C5203074
UMLS CUI-5
C5203676
UMLS CUI-6
C0439056
UMLS CUI-7
C0449243
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
If Swab positive, number of cycles:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
UMLS CUI [1,6]
C2348235
Uncomplicated phase: Viral coinfections
Description

Uncomplicated phase: Viral coinfections

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C0275524
UMLS CUI-4
C0521026
Influenza virus
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0021400
RSV (respiratory syncytial virus)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0035236
HSV (Herpes simplex virus)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0319232
Other
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0521026
UMLS CUI [1,3]
C0205394
If Other, please specify
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0521026
UMLS CUI [1,3]
C3845569
Uncomplicated phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Uncomplicated phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C5397186
UMLS CUI-4
C0474643
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
If IgG-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C2348235
Uncomplicated phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Uncomplicated phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C5203676
UMLS CUI-4
C0474643
UMLS CUI-5
C0020835
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
If IgA-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
UMLS CUI [1,4]
C2348235
Uncomplicated phase: Laboratory values
Description

Uncomplicated phase: Laboratory values

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
GOT/AST
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201899
GPT/ALT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201836
Gamma-GT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202035
Bilirubine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0344395
Lipase
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0373670
Troponine T
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523952
Creatinine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201975
Urea
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523961
LDH
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202113
D-dimer
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C2826333
Fibrinogen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0337428
Triglyceride
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202236
LDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428474
HDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428472
Serum albumin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523465
Uncomplicated phase: Hematological Values
Description

Uncomplicated phase: Hematological Values

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C0018941
Leukocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0023508
Lymphocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200635
Neutrophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200633
Platelets
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0032181
Hemoglobin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0518015
Eosinophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200638
Uncomplicated phase: Other laboratory results
Description

Uncomplicated phase: Other laboratory results

Alias
UMLS CUI-1
C0443334
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
UMLS CUI-4
C0205394
CRP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: mg/L (multiply by 10 if your lab uses mg/dL).

Data type

integer

Alias
UMLS CUI [1]
C0201657
Procalcitonin (PCT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: ng/ml = ug/L.

Data type

integer

Alias
UMLS CUI [1]
C1535922
Interleukin 6 (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/mL ≙ ng/l.

Data type

integer

Alias
UMLS CUI [1]
C0919829
sIL2R (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C4764096
Ferritin (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: μg/L ≙ ng/ml.

Data type

integer

Alias
UMLS CUI [1]
C0373607
INR (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0525032
Activated partial thromboplastin time (aPTT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Units: seconds

Data type

integer

Alias
UMLS CUI [1]
C0030605
CK (Creatine Kinase) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: U/L . (SI unit: nmol/(s l ) in bracets)

Data type

integer

Alias
UMLS CUI [1]
C0201973
CK-MB in reference to above indicated CK
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please indicate the percentage of total CK referring to the above indicated CK value. If CK-MB was not determined in reference to the above indicated CK, report as "not done".

Data type

integer

Alias
UMLS CUI [1]
C0428616
NT-pro-BNP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/ml conversion pg/ml x 0,118 = pmol/l x 8,457 = pg/ml.

Data type

integer

Alias
UMLS CUI [1]
C3272900
Antithrombin III activity (lowest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the lowest value for the whole phase.

Data type

integer

Alias
UMLS CUI [1]
C0200416
Complicated phase: Types of virological testing
Description

Complicated phase: Types of virological testing

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C0599616
UMLS CUI-4
C0332307
PCR
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0032520
Rapid test
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

integer

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
Rapid test, please specify
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

text

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
UMLS CUI [1,3]
C1521902
Serology
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0036743
None
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C1298908
UMLS CUI [1,2]
C0599616
Unknown
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0599616
Complicated phase: PCR: Sites of virological testing
Description

Complicated phase: PCR: Sites of virological testing

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C0032520
UMLS CUI-4
C0011900
UMLS CUI-5
C0205145
UMLS CUI-6
C5203676
UMLS CUI-7
C0599616
Blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0005767
Earlobe capillary blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0229315
UMLS CUI [1,2]
C0229666
Bronchoalveolar lavage
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1535502
Cerebro-spinal fluid
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0007806
Eyes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015392
Nasopharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0027442
Organ biopsy
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0005558
UMLS CUI [1,2]
C0178784
Oropharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1280659
Pharyngeal fluid specimen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0031354
UMLS CUI [1,2]
C1704353
Sputum
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0038056
Stool
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015733
Tracheal aspirate
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1547923
Urine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0042036
Complicated phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Complicated phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C0599161
UMLS CUI-4
C5203074
UMLS CUI-5
C5203676
UMLS CUI-6
C0439056
UMLS CUI-7
C0449243
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
If Swab positive, number of cycles:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
UMLS CUI [1,6]
C2348235
Complicated phase: Viral coinfections
Description

Complicated phase: Viral coinfections

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C0275524
UMLS CUI-4
C0521026
Influenza virus
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0021400
RSV (respiratory syncytial virus)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0035236
HSV (Herpes simplex virus)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0319232
Other
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0521026
UMLS CUI [1,3]
C0205394
If Other, please specify
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0521026
UMLS CUI [1,3]
C3845569
Complicated phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Complicated phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C5397186
UMLS CUI-4
C0474643
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
If IgG-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C2348235
Complicated phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Complicated phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C5203676
UMLS CUI-4
C0474643
UMLS CUI-5
C0020835
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
If IgA-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
UMLS CUI [1,4]
C2348235
Complicated phase: Laboratory values
Description

Complicated phase: Laboratory values

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
GOT/AST
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201899
GPT/ALT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201836
Gamma-GT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202035
Bilirubine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0344395
Lipase
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0373670
Troponine T
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523952
Creatinine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201975
Urea
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523961
LDH
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202113
D-dimer
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C2826333
Fibrinogen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0337428
Triglyceride
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202236
LDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428474
HDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428472
Serum albumin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523465
Complicated phase: Hematological Values
Description

Complicated phase: Hematological Values

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C0018941
Leukocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0023508
Lymphocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200635
Neutrophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200633
Platelets
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0032181
Hemoglobin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0518015
Eosinophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200638
Complicated phase: Other laboratory results
Description

Complicated phase: Other laboratory results

Alias
UMLS CUI-1
C0231242
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
UMLS CUI-4
C0205394
CRP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: mg/L (multiply by 10 if your lab uses mg/dL).

Data type

integer

Alias
UMLS CUI [1]
C0201657
Procalcitonin (PCT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: ng/ml = ug/L.

Data type

integer

Alias
UMLS CUI [1]
C1535922
Interleukin 6 (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/mL ≙ ng/l.

Data type

integer

Alias
UMLS CUI [1]
C0919829
sIL2R (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C4764096
Ferritin (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: μg/L ≙ ng/ml.

Data type

integer

Alias
UMLS CUI [1]
C0373607
INR (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0525032
Activated partial thromboplastin time (aPTT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Units: seconds

Data type

integer

Alias
UMLS CUI [1]
C0030605
CK (Creatine Kinase) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: U/L . (SI unit: nmol/(s l ) in bracets)

Data type

integer

Alias
UMLS CUI [1]
C0201973
CK-MB in reference to above indicated CK
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please indicate the percentage of total CK referring to the above indicated CK value. If CK-MB was not determined in reference to the above indicated CK, report as "not done".

Data type

integer

Alias
UMLS CUI [1]
C0428616
NT-pro-BNP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/ml conversion pg/ml x 0,118 = pmol/l x 8,457 = pg/ml.

Data type

integer

Alias
UMLS CUI [1]
C3272900
Antithrombin III activity (lowest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the lowest value for the whole phase.

Data type

integer

Alias
UMLS CUI [1]
C0200416
Critical phase: Types of virological testing
Description

Critical phase: Types of virological testing

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C0599616
UMLS CUI-4
C0332307
PCR
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0032520
Rapid test
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

integer

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
Rapid test, please specify
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

text

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
UMLS CUI [1,3]
C1521902
Serology
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0036743
None
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C1298908
UMLS CUI [1,2]
C0599616
Unknown
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0599616
Critical phase: PCR: Sites of virological testing
Description

Critical phase: PCR: Sites of virological testing

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C0032520
UMLS CUI-4
C0011900
UMLS CUI-5
C0205145
UMLS CUI-6
C5203676
UMLS CUI-7
C0599616
Blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0005767
Earlobe capillary blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0229315
UMLS CUI [1,2]
C0229666
Bronchoalveolar lavage
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1535502
Cerebro-spinal fluid
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0007806
Eyes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015392
Nasopharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0027442
Organ biopsy
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0005558
UMLS CUI [1,2]
C0178784
Oropharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1280659
Pharyngeal fluid specimen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0031354
UMLS CUI [1,2]
C1704353
Sputum
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0038056
Stool
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015733
Tracheal aspirate
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1547923
Urine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0042036
Critical phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Critical phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C0599161
UMLS CUI-4
C5203074
UMLS CUI-5
C5203676
UMLS CUI-6
C0439056
UMLS CUI-7
C0449243
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
If Swab positive, number of cycles:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
UMLS CUI [1,6]
C2348235
Critical phase: Viral coinfections
Description

Critical phase: Viral coinfections

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C0275524
UMLS CUI-4
C0521026
Influenza virus
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0021400
RSV (respiratory syncytial virus)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0035236
HSV (Herpes simplex virus)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0319232
Other
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0521026
UMLS CUI [1,3]
C0205394
If Other, please specify
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Any occurring during uncomplicated phase of disease.

Data type

integer

Alias
UMLS CUI [1,1]
C0275524
UMLS CUI [1,2]
C0521026
UMLS CUI [1,3]
C3845569
Critical phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Critical phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C5397186
UMLS CUI-4
C0474643
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
If IgG-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C2348235
Critical phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Critical phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C5203676
UMLS CUI-4
C0474643
UMLS CUI-5
C0020835
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
If IgA-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
UMLS CUI [1,4]
C2348235
Critical phase: Laboratory values
Description

Critical phase: Laboratory values

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
GOT/AST
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201899
GPT/ALT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201836
Gamma-GT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202035
Bilirubine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0344395
Lipase
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0373670
Troponine T
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523952
Creatinine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201975
Urea
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523961
LDH
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202113
D-dimer
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C2826333
Fibrinogen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0337428
Triglyceride
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202236
LDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428474
HDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428472
Serum albumin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523465
Critical phase: Hematological Values
Description

Critical phase: Hematological Values

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C0018941
Leukocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0023508
Lymphocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200635
Neutrophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200633
Platelets
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0032181
Hemoglobin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0518015
Eosinophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200638
Critical phase: Other laboratory results
Description

Critical phase: Other laboratory results

Alias
UMLS CUI-1
C1511545
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
UMLS CUI-4
C0205394
CRP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: mg/L (multiply by 10 if your lab uses mg/dL).

Data type

integer

Alias
UMLS CUI [1]
C0201657
Procalcitonin (PCT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: ng/ml = ug/L.

Data type

integer

Alias
UMLS CUI [1]
C1535922
Interleukin 6 (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/mL ≙ ng/l.

Data type

integer

Alias
UMLS CUI [1]
C0919829
sIL2R (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C4764096
Ferritin (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: μg/L ≙ ng/ml.

Data type

integer

Alias
UMLS CUI [1]
C0373607
INR (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0525032
Activated partial thromboplastin time (aPTT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Units: seconds

Data type

integer

Alias
UMLS CUI [1]
C0030605
CK (Creatine Kinase) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: U/L . (SI unit: nmol/(s l ) in bracets)

Data type

integer

Alias
UMLS CUI [1]
C0201973
CK-MB in reference to above indicated CK
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please indicate the percentage of total CK referring to the above indicated CK value. If CK-MB was not determined in reference to the above indicated CK, report as "not done".

Data type

integer

Alias
UMLS CUI [1]
C0428616
NT-pro-BNP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/ml conversion pg/ml x 0,118 = pmol/l x 8,457 = pg/ml.

Data type

integer

Alias
UMLS CUI [1]
C3272900
Antithrombin III activity (lowest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the lowest value for the whole phase.

Data type

integer

Alias
UMLS CUI [1]
C0200416
Recovery phase: Types of virological testing
Description

Recovery phase: Types of virological testing

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C0599616
UMLS CUI-4
C0332307
PCR
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0032520
Rapid test
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

integer

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
Rapid test, please specify
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Specification of the rapid test refers to the test type (e.g. antigen, serology). If unknown note 'ND'.

Data type

text

Alias
UMLS CUI [1,1]
C0022885
UMLS CUI [1,2]
C0456962
UMLS CUI [1,3]
C1521902
Serology
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0036743
None
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C1298908
UMLS CUI [1,2]
C0599616
Unknown
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0439673
UMLS CUI [1,2]
C0599616
Recovery phase: PCR: Sites of virological testing
Description

Recovery phase: PCR: Sites of virological testing

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C0032520
UMLS CUI-4
C0011900
UMLS CUI-5
C0205145
UMLS CUI-6
C5203676
UMLS CUI-7
C0599616
Blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0005767
Earlobe capillary blood
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0229315
UMLS CUI [1,2]
C0229666
Bronchoalveolar lavage
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1535502
Cerebro-spinal fluid
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0007806
Eyes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015392
Nasopharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0027442
Organ biopsy
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0005558
UMLS CUI [1,2]
C0178784
Oropharynx
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1280659
Pharyngeal fluid specimen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1,1]
C0031354
UMLS CUI [1,2]
C1704353
Sputum
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0038056
Stool
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0015733
Tracheal aspirate
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C1547923
Urine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase In case of positive and negative results at the same testing site, please note positive.

Data type

integer

Alias
UMLS CUI [1]
C0042036
Recovery phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Recovery phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C0599161
UMLS CUI-4
C5203074
UMLS CUI-5
C5203676
UMLS CUI-6
C0439056
UMLS CUI-7
C0449243
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
If Swab positive, number of cycles:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1,1]
C0599161
UMLS CUI [1,2]
C5203074
UMLS CUI [1,3]
C5203676
UMLS CUI [1,4]
C0439056
UMLS CUI [1,5]
C0449243
UMLS CUI [1,6]
C2348235
Recovery phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Recovery phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C5397186
UMLS CUI-4
C0474643
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
If IgG-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5397186
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C2348235
Recovery phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Recovery phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C5203676
UMLS CUI-4
C0474643
UMLS CUI-5
C0020835
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

integer

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
If IgA-titer positive, titer:
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase If no numeric titer was measured, use "ND" in the text box.

Data type

text

Alias
UMLS CUI [1,1]
C5203676
UMLS CUI [1,2]
C0474643
UMLS CUI [1,3]
C0020835
UMLS CUI [1,4]
C2348235
Recovery phase: Laboratory values
Description

Recovery phase: Laboratory values

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
GOT/AST
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201899
GPT/ALT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201836
Gamma-GT
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202035
Bilirubine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0344395
Lipase
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0373670
Troponine T
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523952
Creatinine
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0201975
Urea
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523961
LDH
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202113
D-dimer
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C2826333
Fibrinogen
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0337428
Triglyceride
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0202236
LDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428474
HDL
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0428472
Serum albumin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the worst value of each parameter for the whole phase. LLN= lower limit of normal according to the local laboratory. ULN= upper limit of normal according to the local laboratory.

Data type

integer

Alias
UMLS CUI [1]
C0523465
Recovery phase: Hematological Values
Description

Recovery phase: Hematological Values

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C0018941
Leukocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0023508
Lymphocytes
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200635
Neutrophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200633
Platelets
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0032181
Hemoglobin
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0518015
Eosinophils
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Provide worst value for this phase of disease. If both too high and too low values occurred, document the lowest value.

Data type

integer

Alias
UMLS CUI [1]
C0200638
Recovery phase: Other laboratory results
Description

Recovery phase: Other laboratory results

Alias
UMLS CUI-1
C2004454
UMLS CUI-2
C0205390
UMLS CUI-3
C1254595
UMLS CUI-4
C0205394
CRP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: mg/L (multiply by 10 if your lab uses mg/dL).

Data type

integer

Alias
UMLS CUI [1]
C0201657
Procalcitonin (PCT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: ng/ml = ug/L.

Data type

integer

Alias
UMLS CUI [1]
C1535922
Interleukin 6 (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/mL ≙ ng/l.

Data type

integer

Alias
UMLS CUI [1]
C0919829
sIL2R (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C4764096
Ferritin (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: μg/L ≙ ng/ml.

Data type

integer

Alias
UMLS CUI [1]
C0373607
INR (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase

Data type

integer

Alias
UMLS CUI [1]
C0525032
Activated partial thromboplastin time (aPTT) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Units: seconds

Data type

integer

Alias
UMLS CUI [1]
C0030605
CK (Creatine Kinase) (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: U/L . (SI unit: nmol/(s l ) in bracets)

Data type

integer

Alias
UMLS CUI [1]
C0201973
CK-MB in reference to above indicated CK
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please indicate the percentage of total CK referring to the above indicated CK value. If CK-MB was not determined in reference to the above indicated CK, report as "not done".

Data type

integer

Alias
UMLS CUI [1]
C0428616
NT-pro-BNP (highest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Unit: pg/ml conversion pg/ml x 0,118 = pmol/l x 8,457 = pg/ml.

Data type

integer

Alias
UMLS CUI [1]
C3272900
Antithrombin III activity (lowest)
Description

Note: This question is critical for the further course of the questionnaire. During uncomplicated phase Please mark the lowest value for the whole phase.

Data type

integer

Alias
UMLS CUI [1]
C0200416
Is data entry for this section finished?
Description

Is data entry for this section finished?

Alias
UMLS CUI-1
C4684556
UMLS CUI-2
C1828479
UMLS CUI-3
C0205197
Is data entry for this section finished?
Description

Is data entry for this section finished?

Data type

integer

Alias
UMLS CUI [1,1]
C4684556
UMLS CUI [1,2]
C1828479
UMLS CUI [1,3]
C0205197
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Similar models

Baseline II (General virological and laboratory findings for all phases)

1 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Baseline: Types of virological testing
C1442488 (UMLS CUI-1)
C0599616 (UMLS CUI-2)
C0332307 (UMLS CUI-3)
Item
PCR
integer
C0032520 (UMLS CUI [1])
PCR
Code List
PCR
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Rapid test
integer
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
PCR
Code List
Rapid test
CL Item
not quoted (0)
CL Item
quoted (1)
Rapid test, please specify
Item
Rapid test, please specify
text
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
C1521902 (UMLS CUI [1,3])
Item
Serology
integer
C0036743 (UMLS CUI [1])
PCR
Code List
Serology
CL Item
not quoted (0)
CL Item
quoted (1)
Item
None
integer
C1298908 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
None
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Unknown
integer
C0439673 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
Unknown
CL Item
not quoted (0)
CL Item
quoted (1)
Item Group
Baseline: PCR: Site of first detected SARS-CoV-2
C1442488 (UMLS CUI-1)
C0032520 (UMLS CUI-2)
C0205265 (UMLS CUI-3)
C0011900 (UMLS CUI-4)
C0205145 (UMLS CUI-5)
C5203676 (UMLS CUI-6)
Item
Blood
integer
C0005767 (UMLS CUI [1])
Blood
Code List
Blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Earlobe capillary blood
integer
C0229315 (UMLS CUI [1,1])
C0229666 (UMLS CUI [1,2])
Blood
Code List
Earlobe capillary blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Bronchoalveolar lavage
integer
C1535502 (UMLS CUI [1])
Bronchoalveolar lavage
Code List
Bronchoalveolar lavage
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Cerebro-spinal fluid
integer
C0007806 (UMLS CUI [1])
Cerebro-spinal fluid
Code List
Cerebro-spinal fluid
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Conjunctival swab
integer
C2266654 (UMLS CUI [1])
Conjunctival swab
Code List
Conjunctival swab
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Nasopharynx swab
integer
C3669207 (UMLS CUI [1])
Nasopharynx swab
Code List
Nasopharynx swab
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Organ biopsy
integer
C0005558 (UMLS CUI [1,1])
C0178784 (UMLS CUI [1,2])
Organ biopsy
Code List
Organ biopsy
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Oropharynx swab
integer
C2014100 (UMLS CUI [1])
Oropharynx swab
Code List
Oropharynx swab
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Pharyngeal fluid specimen
integer
C0031354 (UMLS CUI [1,1])
C1704353 (UMLS CUI [1,2])
Pharyngeal fluid specimen
Code List
Pharyngeal fluid specimen
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Sputum
integer
C0038056 (UMLS CUI [1])
Sputum
Code List
Sputum
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Stool
integer
C0015733 (UMLS CUI [1])
Stool
Code List
Stool
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Tracheal aspirate
integer
C1547923 (UMLS CUI [1])
Tracheal aspirate
Code List
Tracheal aspirate
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Urine
integer
C0042036 (UMLS CUI [1])
Urine
Code List
Urine
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Baseline: PCR: Tested target at first positive SARS-CoV-2 testing
C1442488 (UMLS CUI-1)
C0032520 (UMLS CUI-2)
C1521840 (UMLS CUI-3)
C0205435 (UMLS CUI-4)
C1446409 (UMLS CUI-5)
C0032520 (UMLS CUI-6)
C0039593 (UMLS CUI-7)
Item
E gene
integer
C5380597 (UMLS CUI [1,1])
C5203676 (UMLS CUI [1,2])
E gene
Code List
E gene
CL Item
not quoted (0)
CL Item
quoted (1)
Item
M gene
integer
C5391474 (UMLS CUI [1,1])
C0017337 (UMLS CUI [1,2])
E gene
Code List
M gene
CL Item
not quoted (0)
CL Item
quoted (1)
Item
N gene
integer
C5380593 (UMLS CUI [1])
E gene
Code List
N gene
CL Item
not quoted (0)
CL Item
quoted (1)
Item
S gene
integer
C5380716 (UMLS CUI [1])
E gene
Code List
S gene
CL Item
not quoted (0)
CL Item
quoted (1)
Item
RdRp gene
integer
C5380596 (UMLS CUI [1])
E gene
Code List
RdRp gene
CL Item
not quoted (0)
CL Item
quoted (1)
Item
ORF1ab gene
integer
C5380670 (UMLS CUI [1])
E gene
Code List
ORF1ab gene
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Other
integer
C0205394 (UMLS CUI [1,1])
C0032520 (UMLS CUI [1,2])
C1521840 (UMLS CUI [1,3])
E gene
Code List
Other
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Other, please specify
integer
C3845569 (UMLS CUI [1,1])
C0032520 (UMLS CUI [1,2])
C1521840 (UMLS CUI [1,3])
E gene
Code List
Other, please specify
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Unknown
integer
C0439673 (UMLS CUI [1,1])
C0032520 (UMLS CUI [1,2])
C1521840 (UMLS CUI [1,3])
E gene
Code List
Unknown
CL Item
not quoted (0)
CL Item
quoted (1)
Item Group
Baseline: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
C1442488 (UMLS CUI-1)
C0599161 (UMLS CUI-2)
C5203074 (UMLS CUI-3)
C5203676 (UMLS CUI-4)
C0439056 (UMLS CUI-5)
C0449243 (UMLS CUI-6)
Item
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles
Code List
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
CL Item
Swab negative (1)
CL Item
Swab positive, number of cycles: (2)
CL Item
No pharyngeal swab (3)
CL Item
Unknown (4)
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles - specification
Item
If Swab positive, number of cycles:
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
C2348235 (UMLS CUI [1,6])
Item Group
Baseline: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
C1442488 (UMLS CUI-1)
C5397186 (UMLS CUI-2)
C0474643 (UMLS CUI-3)
Item
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
integer
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
Anti-SARS-CoV-2 antibodies (IgG) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
CL Item
IgG-titer positive, titer: (1)
CL Item
IgG-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgG) titer specification
Item
If IgG-titer positive, titer:
text
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
Baseline: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
C1442488 (UMLS CUI-1)
C5203676 (UMLS CUI-2)
C0474643 (UMLS CUI-3)
C0020835 (UMLS CUI-4)
Item
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
integer
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
Anti-SARS-CoV-2 antibodies (IgA) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
CL Item
IgA-titer positive, titer: (1)
CL Item
IgA-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgA) titer specification
Item
If IgA-titer positive, titer:
text
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Baseline: Laboratory values
C1442488 (UMLS CUI-1)
C1254595 (UMLS CUI-2)
Item
GOT/AST
integer
C0201899 (UMLS CUI [1])
GOT/AST
Code List
GOT/AST
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
GPT/ALT
integer
C0201836 (UMLS CUI [1])
GPT/ALT
Code List
GPT/ALT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Gamma-GT
integer
C0202035 (UMLS CUI [1])
Gamma-GT
Code List
Gamma-GT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Bilirubine
integer
C0344395 (UMLS CUI [1])
Bilirubine
Code List
Bilirubine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lipase
integer
C0373670 (UMLS CUI [1])
Lipase
Code List
Lipase
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Troponine T
integer
C0523952 (UMLS CUI [1])
Troponine T
Code List
Troponine T
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Creatinine
integer
C0201975 (UMLS CUI [1])
Creatinine
Code List
Creatinine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Urea
integer
C0523961 (UMLS CUI [1])
Urea
Code List
Urea
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDH
integer
C0202113 (UMLS CUI [1])
LDH
Code List
LDH
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
D-dimer
integer
C2826333 (UMLS CUI [1])
D-dimer
Code List
D-dimer
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Fibrinogen
integer
C0337428 (UMLS CUI [1])
Fibrinogen
Code List
Fibrinogen
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Triglyceride
integer
C0202236 (UMLS CUI [1])
Triglyceride
Code List
Triglyceride
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDL
integer
C0428474 (UMLS CUI [1])
Triglyceride
Code List
LDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
HDL
integer
C0428472 (UMLS CUI [1])
Triglyceride
Code List
HDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Serum albumin
integer
C0523465 (UMLS CUI [1])
Triglyceride
Code List
Serum albumin
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Baseline: Hematological Values
C1442488 (UMLS CUI-1)
C0018941 (UMLS CUI-2)
Item
Leukocytes
integer
C0023508 (UMLS CUI [1])
(Leukocytes) 17944
Code List
Leukocytes
CL Item
< 1,000 /µL (1)
CL Item
1,000 - 3999 /µL (2)
CL Item
4,000 - 7,999 /µL (3)
CL Item
8,000 - 11,999 /µL (4)
CL Item
12,000 - 15,999 /µL6 = 16,000 - 19,999 /µL (5)
CL Item
>=20,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lymphocytes
integer
C0200635 (UMLS CUI [1])
(Lymphocytes) 17945
Code List
Lymphocytes
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 799 /µL (4)
CL Item
800 - 1499 /µL (5)
CL Item
1500 - 2,999 /µL (6)
CL Item
>=3,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Neutrophils
integer
C0200633 (UMLS CUI [1])
(Neutrophils) 17946
Code List
Neutrophils
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 1,999 /µL (4)
CL Item
2,000 - 4,999 /µL (5)
CL Item
5,000 - 8,999 /µL (6)
CL Item
>=9,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Platelets
integer
C0032181 (UMLS CUI [1])
(Platelets) 17947
Code List
Platelets
CL Item
< 10,000 /µL (1)
CL Item
10,000 - 49,999 /µL (2)
CL Item
50,000 - 119,999 /µL (3)
CL Item
120,000 - 449,999 /µL (4)
CL Item
450,000 - 799,999 /µL (5)
CL Item
800,000 - 1,199,999 /µL (6)
CL Item
>=1,200,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Hemoglobin
integer
C0518015 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Hemoglobin
CL Item
< 6 g/dL (< 3.72) (1)
CL Item
6 - 7.9 g/dL (3.72 - 4.9) (2)
CL Item
8 - 9.9 g/dL (4.91 - 6.15) (3)
CL Item
10 - 11.9 g/dL (6.16 - 7.39) (4)
CL Item
12 - 14.9 g/dL (7.4 - 9.25) (5)
CL Item
>= 15 g/dL (> 9.25) (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
Eosinophils
integer
C0200638 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Eosinophils
CL Item
< 100 /µL (1)
CL Item
100 - 199 /µL (2)
CL Item
200 - 299 /µL (3)
CL Item
300 - 399 /µL (4)
CL Item
400 - 499 /µL (5)
CL Item
500 - 599 /µL (6)
CL Item
>=600 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Baseline: Other laboratory results
C1442488 (UMLS CUI-1)
C1254595 (UMLS CUI-2)
C0205394 (UMLS CUI-3)
Item
CRP
integer
C0201657 (UMLS CUI [1])
BL_CRP
Code List
CRP
CL Item
< 3 mg/L (1)
CL Item
3- 29 mg/L (2)
CL Item
30 - 69 mg/L (3)
CL Item
70 - 119 mg/L (4)
CL Item
120 - 179 mg/L (5)
CL Item
180 - 249 mg/L (6)
CL Item
> 249 mg/L (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Procalcitonin (PCT)
integer
C1535922 (UMLS CUI [1])
BL_CRP
Code List
Procalcitonin (PCT)
CL Item
< 0.005 ng/ml (1)
CL Item
0.005 - 0.5 ng/ml (2)
CL Item
0.51 - 2 ng/ml (3)
CL Item
2.1 - 10 ng/ml (4)
CL Item
> 10 ng/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Interleukin 6
integer
C0919829 (UMLS CUI [1])
BL_IL6
Code List
Interleukin 6
CL Item
< 1.8 pg/mL (1)
CL Item
1.8 - 49 pg/mL (2)
CL Item
50 - 199 pg/mL (3)
CL Item
200 - 499 pg/mL (4)
CL Item
500 - 999 pg/mL (5)
CL Item
1000 - 4999 pg/mL (6)
CL Item
> 4999 pg/mL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
sIL2R
integer
C4764096 (UMLS CUI [1])
BL_sIL2R
Code List
sIL2R
CL Item
< 2.500 U/ml (1)
CL Item
2.500 - 10.000 U/ml (2)
CL Item
> 10.000 U/ml (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
Ferritin
integer
C0373607 (UMLS CUI [1])
BL_Ferritin
Code List
Ferritin
CL Item
< 300 ng/ml (1)
CL Item
300 - 499 ng/ml (2)
CL Item
500 - 999 ng/ml (3)
CL Item
1000 - 1999 ng/ml (4)
CL Item
2000 - 4000 ng/ml (5)
CL Item
> 4000 ng/ml (6)
CL Item
Unknown (8)
CL Item
Not done (7)
Item
INR
integer
C0525032 (UMLS CUI [1])
INR
Code List
INR
CL Item
< 1.25 (1)
CL Item
1.25 - 2 (2)
CL Item
2 - 3.5 (3)
CL Item
> 3.5 (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Activated partial thromboplastin time (aPTT)
integer
C0030605 (UMLS CUI [1])
Activated partial thromboplastin time (aPTT)
Code List
Activated partial thromboplastin time (aPTT)
CL Item
< 25 s (1)
CL Item
25 - 39 s (2)
CL Item
40 - 54 s (3)
CL Item
55 - 69 s (4)
CL Item
70 - 84 s (5)
CL Item
> 84 s (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
CK (Creatine Kinase)
integer
C0201973 (UMLS CUI [1])
CK (Creatine Kinase)
Code List
CK (Creatine Kinase)
CL Item
< 200 U/l (< 3.34 nmol/sl) (1)
CL Item
200 - 500 U/l (3.34 - 8.36 nmol/sl) (2)
CL Item
501 - 1000 U/l (8.37 - 16.72 nmol/sl) (3)
CL Item
1001 - 2000 U/l (16.73 - 33.44 nmol/sl) (4)
CL Item
> 2000 U/l (> 33.44 nmol/sl) (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
CK-MB in reference to above indicated CK
integer
C0428616 (UMLS CUI [1])
CK-MB/CK ratio
Code List
CK-MB in reference to above indicated CK
CL Item
< 6 % (1)
CL Item
6-25 % (2)
CL Item
> 25 % (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
NT-pro-BNP
integer
C3272900 (UMLS CUI [1])
NT-pro-BNP
Code List
NT-pro-BNP
CL Item
0 - 200 pg/ml (1)
CL Item
201 - 500 pg/ml (2)
CL Item
501 - 1000 pg/ml (3)
CL Item
1001 - 2000 pg/ml (4)
CL Item
> 2000 pg/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Antithrombin III activity
integer
C0200416 (UMLS CUI [1])
Antithrombin III activity
Code List
Antithrombin III activity
CL Item
< 70 % (1)
CL Item
70 - 89 % (2)
CL Item
90 - 109 % (3)
CL Item
>= 110 % (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
TSH
integer
C0202230 (UMLS CUI [1])
TSH
Code List
TSH
CL Item
< 0.3 mU/l (1)
CL Item
0.3 - 4.29 mU/l (2)
CL Item
4.3 - 8.29 mU/l (3)
CL Item
> 8.29 mU/l (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
25-Hydroxyvitamin D
integer
C2984945 (UMLS CUI [1])
25-Hydroxyvitamin D
Code List
25-Hydroxyvitamin D
CL Item
< 5 ng/ml (< 12.5 nmol/L) (1)
CL Item
5-9 ng/ml (12.5-24.9 nmol/L) (2)
CL Item
10-19 ng/ml (25-49.9 nmol/L) (3)
CL Item
20-39 ng/ml (50-99.9 nmol/L) (4)
CL Item
40-60 ng/ml (100-150 nmol/L) (5)
CL Item
> 60 ng/ml (> 150 nmol/L) (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item Group
Baseline: Urine test strips
C1442488 (UMLS CUI-1)
C0430370 (UMLS CUI-2)
Item
Leukocytes
integer
C1256582 (UMLS CUI [1])
undefined item
Code List
Leukocytes
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Nitrite
integer
C0580333 (UMLS CUI [1])
Urine nitrite
Code List
Nitrite
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Total protein
integer
C0428541 (UMLS CUI [1])
Urine total protein
Code List
Total protein
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Erys / Hemoglobin
integer
C2188659 (UMLS CUI [1])
C0236439 (UMLS CUI [2])
Urine erythrocytes / hemoglobin
Code List
Erys / Hemoglobin
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Glucose
integer
C0430376 (UMLS CUI [1])
Urine glucose
Code List
Glucose
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Ketone bodies
integer
C0555179 (UMLS CUI [1])
Urine ketone bodies
Code List
Ketone bodies
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Bilirubin
integer
C0430374 (UMLS CUI [1])
Urine bilirubin
Code List
Bilirubin
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Urobilinogen
integer
C0427736 (UMLS CUI [1])
Urine urobilinogen
Code List
Urobilinogen
CL Item
Negative (1)
CL Item
Positive + (2)
CL Item
Positive ++ (3)
CL Item
Positive +++ (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item Group
Uncomplicated phase: Types of virological testing
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599616 (UMLS CUI-3)
C0332307 (UMLS CUI-4)
Item
PCR
integer
C0032520 (UMLS CUI [1])
PCR
Code List
PCR
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Rapid test
integer
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
PCR
Code List
Rapid test
CL Item
not quoted (0)
CL Item
quoted (1)
Rapid test, please specify
Item
Rapid test, please specify
text
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
C1521902 (UMLS CUI [1,3])
Item
Serology
integer
C0036743 (UMLS CUI [1])
PCR
Code List
Serology
CL Item
not quoted (0)
CL Item
quoted (1)
Item
None
integer
C1298908 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
None
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Unknown
integer
C0439673 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
Unknown
CL Item
not quoted (0)
CL Item
quoted (1)
Item Group
Uncomplicated phase: PCR: Sites of virological testing
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0032520 (UMLS CUI-3)
C0011900 (UMLS CUI-4)
C0205145 (UMLS CUI-5)
C5203676 (UMLS CUI-6)
C0599616 (UMLS CUI-7)
Item
Blood
integer
C0005767 (UMLS CUI [1])
Blood
Code List
Blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Earlobe capillary blood
integer
C0229315 (UMLS CUI [1,1])
C0229666 (UMLS CUI [1,2])
Blood
Code List
Earlobe capillary blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Bronchoalveolar lavage
integer
C1535502 (UMLS CUI [1])
Bronchoalveolar lavage
Code List
Bronchoalveolar lavage
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Cerebro-spinal fluid
integer
C0007806 (UMLS CUI [1])
Cerebro-spinal fluid
Code List
Cerebro-spinal fluid
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Eyes
integer
C0015392 (UMLS CUI [1])
Conjunctival swab
Code List
Eyes
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Nasopharynx
integer
C0027442 (UMLS CUI [1])
Nasopharynx swab
Code List
Nasopharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Organ biopsy
integer
C0005558 (UMLS CUI [1,1])
C0178784 (UMLS CUI [1,2])
Organ biopsy
Code List
Organ biopsy
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Oropharynx
integer
C1280659 (UMLS CUI [1])
Oropharynx swab
Code List
Oropharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Pharyngeal fluid specimen
integer
C0031354 (UMLS CUI [1,1])
C1704353 (UMLS CUI [1,2])
Pharyngeal fluid specimen
Code List
Pharyngeal fluid specimen
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Sputum
integer
C0038056 (UMLS CUI [1])
Sputum
Code List
Sputum
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Stool
integer
C0015733 (UMLS CUI [1])
Stool
Code List
Stool
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Tracheal aspirate
integer
C1547923 (UMLS CUI [1])
Tracheal aspirate
Code List
Tracheal aspirate
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Urine
integer
C0042036 (UMLS CUI [1])
Urine
Code List
Urine
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Uncomplicated phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599161 (UMLS CUI-3)
C5203074 (UMLS CUI-4)
C5203676 (UMLS CUI-5)
C0439056 (UMLS CUI-6)
C0449243 (UMLS CUI-7)
Item
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles
Code List
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
CL Item
Swab negative (1)
CL Item
Swab positive, number of cycles: (2)
CL Item
No pharyngeal swab (3)
CL Item
Unknown (4)
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles - specification
Item
If Swab positive, number of cycles:
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
C2348235 (UMLS CUI [1,6])
Item Group
Uncomplicated phase: Viral coinfections
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0275524 (UMLS CUI-3)
C0521026 (UMLS CUI-4)
Item
Influenza virus
integer
C0275524 (UMLS CUI [1,1])
C0021400 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
Influenza virus
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
RSV (respiratory syncytial virus)
integer
C0275524 (UMLS CUI [1,1])
C0035236 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
RSV (respiratory syncytial virus)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
HSV (Herpes simplex virus)
integer
C0275524 (UMLS CUI [1,1])
C0319232 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
HSV (Herpes simplex virus)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Other
integer
C0275524 (UMLS CUI [1,1])
C0521026 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
Coinfection: Influenza virus
Code List
Other
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
If Other, please specify
integer
C0275524 (UMLS CUI [1,1])
C0521026 (UMLS CUI [1,2])
C3845569 (UMLS CUI [1,3])
Coinfection: Influenza virus
Code List
If Other, please specify
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Uncomplicated phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5397186 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
Item
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
integer
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
Anti-SARS-CoV-2 antibodies (IgG) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
CL Item
IgG-titer positive, titer: (1)
CL Item
IgG-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgG) titer specification
Item
If IgG-titer positive, titer:
text
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
Uncomplicated phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5203676 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
C0020835 (UMLS CUI-5)
Item
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
integer
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
Anti-SARS-CoV-2 antibodies (IgA) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
CL Item
IgA-titer positive, titer: (1)
CL Item
IgA-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgA) titer specification
Item
If IgA-titer positive, titer:
text
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Uncomplicated phase: Laboratory values
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
Item
GOT/AST
integer
C0201899 (UMLS CUI [1])
GOT/AST
Code List
GOT/AST
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
GPT/ALT
integer
C0201836 (UMLS CUI [1])
GPT/ALT
Code List
GPT/ALT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Gamma-GT
integer
C0202035 (UMLS CUI [1])
Gamma-GT
Code List
Gamma-GT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Bilirubine
integer
C0344395 (UMLS CUI [1])
Bilirubine
Code List
Bilirubine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lipase
integer
C0373670 (UMLS CUI [1])
Lipase
Code List
Lipase
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Troponine T
integer
C0523952 (UMLS CUI [1])
Troponine T
Code List
Troponine T
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Creatinine
integer
C0201975 (UMLS CUI [1])
Creatinine
Code List
Creatinine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Urea
integer
C0523961 (UMLS CUI [1])
Urea
Code List
Urea
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDH
integer
C0202113 (UMLS CUI [1])
LDH
Code List
LDH
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
D-dimer
integer
C2826333 (UMLS CUI [1])
D-dimer
Code List
D-dimer
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Fibrinogen
integer
C0337428 (UMLS CUI [1])
Fibrinogen
Code List
Fibrinogen
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Triglyceride
integer
C0202236 (UMLS CUI [1])
Triglyceride
Code List
Triglyceride
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDL
integer
C0428474 (UMLS CUI [1])
Triglyceride
Code List
LDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
HDL
integer
C0428472 (UMLS CUI [1])
Triglyceride
Code List
HDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Serum albumin
integer
C0523465 (UMLS CUI [1])
Triglyceride
Code List
Serum albumin
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Uncomplicated phase: Hematological Values
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0018941 (UMLS CUI-3)
Item
Leukocytes
integer
C0023508 (UMLS CUI [1])
(Leukocytes) 17944
Code List
Leukocytes
CL Item
< 1,000 /µL (1)
CL Item
1,000 - 3999 /µL (2)
CL Item
4,000 - 7,999 /µL (3)
CL Item
8,000 - 11,999 /µL (4)
CL Item
12,000 - 15,999 /µL6 = 16,000 - 19,999 /µL (5)
CL Item
>=20,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lymphocytes
integer
C0200635 (UMLS CUI [1])
(Lymphocytes) 17945
Code List
Lymphocytes
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 799 /µL (4)
CL Item
800 - 1499 /µL (5)
CL Item
1500 - 2,999 /µL (6)
CL Item
>=3,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Neutrophils
integer
C0200633 (UMLS CUI [1])
(Neutrophils) 17946
Code List
Neutrophils
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 1,999 /µL (4)
CL Item
2,000 - 4,999 /µL (5)
CL Item
5,000 - 8,999 /µL (6)
CL Item
>=9,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Platelets
integer
C0032181 (UMLS CUI [1])
(Platelets) 17947
Code List
Platelets
CL Item
< 10,000 /µL (1)
CL Item
10,000 - 49,999 /µL (2)
CL Item
50,000 - 119,999 /µL (3)
CL Item
120,000 - 449,999 /µL (4)
CL Item
450,000 - 799,999 /µL (5)
CL Item
800,000 - 1,199,999 /µL (6)
CL Item
>=1,200,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Hemoglobin
integer
C0518015 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Hemoglobin
CL Item
< 6 g/dL (< 3.72) (1)
CL Item
6 - 7.9 g/dL (3.72 - 4.9) (2)
CL Item
8 - 9.9 g/dL (4.91 - 6.15) (3)
CL Item
10 - 11.9 g/dL (6.16 - 7.39) (4)
CL Item
12 - 14.9 g/dL (7.4 - 9.25) (5)
CL Item
>= 15 g/dL (> 9.25) (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
Eosinophils
integer
C0200638 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Eosinophils
CL Item
< 100 /µL (1)
CL Item
100 - 199 /µL (2)
CL Item
200 - 299 /µL (3)
CL Item
300 - 399 /µL (4)
CL Item
400 - 499 /µL (5)
CL Item
500 - 599 /µL (6)
CL Item
>=600 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Uncomplicated phase: Other laboratory results
C0443334 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
C0205394 (UMLS CUI-4)
Item
CRP (highest)
integer
C0201657 (UMLS CUI [1])
BL_CRP
Code List
CRP (highest)
CL Item
< 3 mg/L (1)
CL Item
3- 29 mg/L (2)
CL Item
30 - 69 mg/L (3)
CL Item
70 - 119 mg/L (4)
CL Item
120 - 179 mg/L (5)
CL Item
180 - 249 mg/L (6)
CL Item
> 249 mg/L (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Procalcitonin (PCT) (highest)
integer
C1535922 (UMLS CUI [1])
BL_CRP
Code List
Procalcitonin (PCT) (highest)
CL Item
< 0.005 ng/ml (1)
CL Item
0.005 - 0.5 ng/ml (2)
CL Item
0.51 - 2 ng/ml (3)
CL Item
2.1 - 10 ng/ml (4)
CL Item
> 10 ng/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Interleukin 6 (highest)
integer
C0919829 (UMLS CUI [1])
BL_IL6
Code List
Interleukin 6 (highest)
CL Item
< 1.8 pg/mL (1)
CL Item
1.8 - 49 pg/mL (2)
CL Item
50 - 199 pg/mL (3)
CL Item
200 - 499 pg/mL (4)
CL Item
500 - 999 pg/mL (5)
CL Item
1000 - 4999 pg/mL (6)
CL Item
> 4999 pg/mL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
sIL2R (highest)
integer
C4764096 (UMLS CUI [1])
BL_sIL2R
Code List
sIL2R (highest)
CL Item
< 2.500 U/ml (1)
CL Item
2.500 - 10.000 U/ml (2)
CL Item
> 10.000 U/ml (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
Ferritin (highest)
integer
C0373607 (UMLS CUI [1])
BL_Ferritin
Code List
Ferritin (highest)
CL Item
< 300 ng/ml (1)
CL Item
300 - 499 ng/ml (2)
CL Item
500 - 999 ng/ml (3)
CL Item
1000 - 1999 ng/ml (4)
CL Item
2000 - 4000 ng/ml (5)
CL Item
> 4000 ng/ml (6)
CL Item
Unknown (8)
CL Item
Not done (7)
Item
INR (highest)
integer
C0525032 (UMLS CUI [1])
INR
Code List
INR (highest)
CL Item
< 1.25 (1)
CL Item
1.25 - 2 (2)
CL Item
2 - 3.5 (3)
CL Item
> 3.5 (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Activated partial thromboplastin time (aPTT) (highest)
integer
C0030605 (UMLS CUI [1])
Activated partial thromboplastin time (aPTT)
Code List
Activated partial thromboplastin time (aPTT) (highest)
CL Item
< 25 s (1)
CL Item
25 - 39 s (2)
CL Item
40 - 54 s (3)
CL Item
55 - 69 s (4)
CL Item
70 - 84 s (5)
CL Item
> 84 s (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
CK (Creatine Kinase) (highest)
integer
C0201973 (UMLS CUI [1])
CK (Creatine Kinase)
Code List
CK (Creatine Kinase) (highest)
CL Item
< 200 U/l (< 3.34 nmol/sl) (1)
CL Item
200 - 500 U/l (3.34 - 8.36 nmol/sl) (2)
CL Item
501 - 1000 U/l (8.37 - 16.72 nmol/sl) (3)
CL Item
1001 - 2000 U/l (16.73 - 33.44 nmol/sl) (4)
CL Item
> 2000 U/l (> 33.44 nmol/sl) (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
CK-MB in reference to above indicated CK
integer
C0428616 (UMLS CUI [1])
CK-MB/CK ratio
Code List
CK-MB in reference to above indicated CK
CL Item
< 6 % (1)
CL Item
6-25 % (2)
CL Item
> 25 % (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
NT-pro-BNP (highest)
integer
C3272900 (UMLS CUI [1])
NT-pro-BNP
Code List
NT-pro-BNP (highest)
CL Item
0 - 200 pg/ml (1)
CL Item
201 - 500 pg/ml (2)
CL Item
501 - 1000 pg/ml (3)
CL Item
1001 - 2000 pg/ml (4)
CL Item
> 2000 pg/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Antithrombin III activity (lowest)
integer
C0200416 (UMLS CUI [1])
Antithrombin III activity
Code List
Antithrombin III activity (lowest)
CL Item
< 70 % (1)
CL Item
70 - 89 % (2)
CL Item
90 - 109 % (3)
CL Item
>= 110 % (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item Group
Complicated phase: Types of virological testing
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599616 (UMLS CUI-3)
C0332307 (UMLS CUI-4)
Item
PCR
integer
C0032520 (UMLS CUI [1])
PCR
Code List
PCR
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Rapid test
integer
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
PCR
Code List
Rapid test
CL Item
not quoted (0)
CL Item
quoted (1)
Rapid test, please specify
Item
Rapid test, please specify
text
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
C1521902 (UMLS CUI [1,3])
Item
Serology
integer
C0036743 (UMLS CUI [1])
PCR
Code List
Serology
CL Item
not quoted (0)
CL Item
quoted (1)
Item
None
integer
C1298908 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
None
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Unknown
integer
C0439673 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
Unknown
CL Item
not quoted (0)
CL Item
quoted (1)
Item Group
Complicated phase: PCR: Sites of virological testing
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0032520 (UMLS CUI-3)
C0011900 (UMLS CUI-4)
C0205145 (UMLS CUI-5)
C5203676 (UMLS CUI-6)
C0599616 (UMLS CUI-7)
Item
Blood
integer
C0005767 (UMLS CUI [1])
Blood
Code List
Blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Earlobe capillary blood
integer
C0229315 (UMLS CUI [1,1])
C0229666 (UMLS CUI [1,2])
Blood
Code List
Earlobe capillary blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Bronchoalveolar lavage
integer
C1535502 (UMLS CUI [1])
Bronchoalveolar lavage
Code List
Bronchoalveolar lavage
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Cerebro-spinal fluid
integer
C0007806 (UMLS CUI [1])
Cerebro-spinal fluid
Code List
Cerebro-spinal fluid
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Eyes
integer
C0015392 (UMLS CUI [1])
Conjunctival swab
Code List
Eyes
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Nasopharynx
integer
C0027442 (UMLS CUI [1])
Nasopharynx swab
Code List
Nasopharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Organ biopsy
integer
C0005558 (UMLS CUI [1,1])
C0178784 (UMLS CUI [1,2])
Organ biopsy
Code List
Organ biopsy
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Oropharynx
integer
C1280659 (UMLS CUI [1])
Oropharynx swab
Code List
Oropharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Pharyngeal fluid specimen
integer
C0031354 (UMLS CUI [1,1])
C1704353 (UMLS CUI [1,2])
Pharyngeal fluid specimen
Code List
Pharyngeal fluid specimen
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Sputum
integer
C0038056 (UMLS CUI [1])
Sputum
Code List
Sputum
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Stool
integer
C0015733 (UMLS CUI [1])
Stool
Code List
Stool
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Tracheal aspirate
integer
C1547923 (UMLS CUI [1])
Tracheal aspirate
Code List
Tracheal aspirate
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Urine
integer
C0042036 (UMLS CUI [1])
Urine
Code List
Urine
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Complicated phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599161 (UMLS CUI-3)
C5203074 (UMLS CUI-4)
C5203676 (UMLS CUI-5)
C0439056 (UMLS CUI-6)
C0449243 (UMLS CUI-7)
Item
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles
Code List
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
CL Item
Swab negative (1)
CL Item
Swab positive, number of cycles: (2)
CL Item
No pharyngeal swab (3)
CL Item
Unknown (4)
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles - specification
Item
If Swab positive, number of cycles:
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
C2348235 (UMLS CUI [1,6])
Item Group
Complicated phase: Viral coinfections
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0275524 (UMLS CUI-3)
C0521026 (UMLS CUI-4)
Item
Influenza virus
integer
C0275524 (UMLS CUI [1,1])
C0021400 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
Influenza virus
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
RSV (respiratory syncytial virus)
integer
C0275524 (UMLS CUI [1,1])
C0035236 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
RSV (respiratory syncytial virus)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
HSV (Herpes simplex virus)
integer
C0275524 (UMLS CUI [1,1])
C0319232 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
HSV (Herpes simplex virus)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Other
integer
C0275524 (UMLS CUI [1,1])
C0521026 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
Coinfection: Influenza virus
Code List
Other
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
If Other, please specify
integer
C0275524 (UMLS CUI [1,1])
C0521026 (UMLS CUI [1,2])
C3845569 (UMLS CUI [1,3])
Coinfection: Influenza virus
Code List
If Other, please specify
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Complicated phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5397186 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
Item
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
integer
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
Anti-SARS-CoV-2 antibodies (IgG) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
CL Item
IgG-titer positive, titer: (1)
CL Item
IgG-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgG) titer specification
Item
If IgG-titer positive, titer:
text
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
Complicated phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5203676 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
C0020835 (UMLS CUI-5)
Item
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
integer
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
Anti-SARS-CoV-2 antibodies (IgA) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
CL Item
IgA-titer positive, titer: (1)
CL Item
IgA-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgA) titer specification
Item
If IgA-titer positive, titer:
text
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Complicated phase: Laboratory values
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
Item
GOT/AST
integer
C0201899 (UMLS CUI [1])
GOT/AST
Code List
GOT/AST
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
GPT/ALT
integer
C0201836 (UMLS CUI [1])
GPT/ALT
Code List
GPT/ALT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Gamma-GT
integer
C0202035 (UMLS CUI [1])
Gamma-GT
Code List
Gamma-GT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Bilirubine
integer
C0344395 (UMLS CUI [1])
Bilirubine
Code List
Bilirubine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lipase
integer
C0373670 (UMLS CUI [1])
Lipase
Code List
Lipase
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Troponine T
integer
C0523952 (UMLS CUI [1])
Troponine T
Code List
Troponine T
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Creatinine
integer
C0201975 (UMLS CUI [1])
Creatinine
Code List
Creatinine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Urea
integer
C0523961 (UMLS CUI [1])
Urea
Code List
Urea
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDH
integer
C0202113 (UMLS CUI [1])
LDH
Code List
LDH
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
D-dimer
integer
C2826333 (UMLS CUI [1])
D-dimer
Code List
D-dimer
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Fibrinogen
integer
C0337428 (UMLS CUI [1])
Fibrinogen
Code List
Fibrinogen
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Triglyceride
integer
C0202236 (UMLS CUI [1])
Triglyceride
Code List
Triglyceride
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDL
integer
C0428474 (UMLS CUI [1])
Triglyceride
Code List
LDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
HDL
integer
C0428472 (UMLS CUI [1])
Triglyceride
Code List
HDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Serum albumin
integer
C0523465 (UMLS CUI [1])
Triglyceride
Code List
Serum albumin
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Complicated phase: Hematological Values
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0018941 (UMLS CUI-3)
Item
Leukocytes
integer
C0023508 (UMLS CUI [1])
(Leukocytes) 17944
Code List
Leukocytes
CL Item
< 1,000 /µL (1)
CL Item
1,000 - 3999 /µL (2)
CL Item
4,000 - 7,999 /µL (3)
CL Item
8,000 - 11,999 /µL (4)
CL Item
12,000 - 15,999 /µL6 = 16,000 - 19,999 /µL (5)
CL Item
>=20,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lymphocytes
integer
C0200635 (UMLS CUI [1])
(Lymphocytes) 17945
Code List
Lymphocytes
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 799 /µL (4)
CL Item
800 - 1499 /µL (5)
CL Item
1500 - 2,999 /µL (6)
CL Item
>=3,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Neutrophils
integer
C0200633 (UMLS CUI [1])
(Neutrophils) 17946
Code List
Neutrophils
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 1,999 /µL (4)
CL Item
2,000 - 4,999 /µL (5)
CL Item
5,000 - 8,999 /µL (6)
CL Item
>=9,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Platelets
integer
C0032181 (UMLS CUI [1])
(Platelets) 17947
Code List
Platelets
CL Item
< 10,000 /µL (1)
CL Item
10,000 - 49,999 /µL (2)
CL Item
50,000 - 119,999 /µL (3)
CL Item
120,000 - 449,999 /µL (4)
CL Item
450,000 - 799,999 /µL (5)
CL Item
800,000 - 1,199,999 /µL (6)
CL Item
>=1,200,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Hemoglobin
integer
C0518015 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Hemoglobin
CL Item
< 6 g/dL (< 3.72) (1)
CL Item
6 - 7.9 g/dL (3.72 - 4.9) (2)
CL Item
8 - 9.9 g/dL (4.91 - 6.15) (3)
CL Item
10 - 11.9 g/dL (6.16 - 7.39) (4)
CL Item
12 - 14.9 g/dL (7.4 - 9.25) (5)
CL Item
>= 15 g/dL (> 9.25) (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
Eosinophils
integer
C0200638 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Eosinophils
CL Item
< 100 /µL (1)
CL Item
100 - 199 /µL (2)
CL Item
200 - 299 /µL (3)
CL Item
300 - 399 /µL (4)
CL Item
400 - 499 /µL (5)
CL Item
500 - 599 /µL (6)
CL Item
>=600 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Complicated phase: Other laboratory results
C0231242 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
C0205394 (UMLS CUI-4)
Item
CRP (highest)
integer
C0201657 (UMLS CUI [1])
BL_CRP
Code List
CRP (highest)
CL Item
< 3 mg/L (1)
CL Item
3- 29 mg/L (2)
CL Item
30 - 69 mg/L (3)
CL Item
70 - 119 mg/L (4)
CL Item
120 - 179 mg/L (5)
CL Item
180 - 249 mg/L (6)
CL Item
> 249 mg/L (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Procalcitonin (PCT) (highest)
integer
C1535922 (UMLS CUI [1])
BL_CRP
Code List
Procalcitonin (PCT) (highest)
CL Item
< 0.005 ng/ml (1)
CL Item
0.005 - 0.5 ng/ml (2)
CL Item
0.51 - 2 ng/ml (3)
CL Item
2.1 - 10 ng/ml (4)
CL Item
> 10 ng/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Interleukin 6 (highest)
integer
C0919829 (UMLS CUI [1])
BL_IL6
Code List
Interleukin 6 (highest)
CL Item
< 1.8 pg/mL (1)
CL Item
1.8 - 49 pg/mL (2)
CL Item
50 - 199 pg/mL (3)
CL Item
200 - 499 pg/mL (4)
CL Item
500 - 999 pg/mL (5)
CL Item
1000 - 4999 pg/mL (6)
CL Item
> 4999 pg/mL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
sIL2R (highest)
integer
C4764096 (UMLS CUI [1])
BL_sIL2R
Code List
sIL2R (highest)
CL Item
< 2.500 U/ml (1)
CL Item
2.500 - 10.000 U/ml (2)
CL Item
> 10.000 U/ml (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
Ferritin (highest)
integer
C0373607 (UMLS CUI [1])
BL_Ferritin
Code List
Ferritin (highest)
CL Item
< 300 ng/ml (1)
CL Item
300 - 499 ng/ml (2)
CL Item
500 - 999 ng/ml (3)
CL Item
1000 - 1999 ng/ml (4)
CL Item
2000 - 4000 ng/ml (5)
CL Item
> 4000 ng/ml (6)
CL Item
Unknown (8)
CL Item
Not done (7)
Item
INR (highest)
integer
C0525032 (UMLS CUI [1])
INR
Code List
INR (highest)
CL Item
< 1.25 (1)
CL Item
1.25 - 2 (2)
CL Item
2 - 3.5 (3)
CL Item
> 3.5 (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Activated partial thromboplastin time (aPTT) (highest)
integer
C0030605 (UMLS CUI [1])
Activated partial thromboplastin time (aPTT)
Code List
Activated partial thromboplastin time (aPTT) (highest)
CL Item
< 25 s (1)
CL Item
25 - 39 s (2)
CL Item
40 - 54 s (3)
CL Item
55 - 69 s (4)
CL Item
70 - 84 s (5)
CL Item
> 84 s (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
CK (Creatine Kinase) (highest)
integer
C0201973 (UMLS CUI [1])
CK (Creatine Kinase)
Code List
CK (Creatine Kinase) (highest)
CL Item
< 200 U/l (< 3.34 nmol/sl) (1)
CL Item
200 - 500 U/l (3.34 - 8.36 nmol/sl) (2)
CL Item
501 - 1000 U/l (8.37 - 16.72 nmol/sl) (3)
CL Item
1001 - 2000 U/l (16.73 - 33.44 nmol/sl) (4)
CL Item
> 2000 U/l (> 33.44 nmol/sl) (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
CK-MB in reference to above indicated CK
integer
C0428616 (UMLS CUI [1])
CK-MB/CK ratio
Code List
CK-MB in reference to above indicated CK
CL Item
< 6 % (1)
CL Item
6-25 % (2)
CL Item
> 25 % (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
NT-pro-BNP (highest)
integer
C3272900 (UMLS CUI [1])
NT-pro-BNP
Code List
NT-pro-BNP (highest)
CL Item
0 - 200 pg/ml (1)
CL Item
201 - 500 pg/ml (2)
CL Item
501 - 1000 pg/ml (3)
CL Item
1001 - 2000 pg/ml (4)
CL Item
> 2000 pg/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Antithrombin III activity (lowest)
integer
C0200416 (UMLS CUI [1])
Antithrombin III activity
Code List
Antithrombin III activity (lowest)
CL Item
< 70 % (1)
CL Item
70 - 89 % (2)
CL Item
90 - 109 % (3)
CL Item
>= 110 % (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item Group
Critical phase: Types of virological testing
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599616 (UMLS CUI-3)
C0332307 (UMLS CUI-4)
Item
PCR
integer
C0032520 (UMLS CUI [1])
PCR
Code List
PCR
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Rapid test
integer
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
PCR
Code List
Rapid test
CL Item
not quoted (0)
CL Item
quoted (1)
Rapid test, please specify
Item
Rapid test, please specify
text
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
C1521902 (UMLS CUI [1,3])
Item
Serology
integer
C0036743 (UMLS CUI [1])
PCR
Code List
Serology
CL Item
not quoted (0)
CL Item
quoted (1)
Item
None
integer
C1298908 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
None
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Unknown
integer
C0439673 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
Unknown
CL Item
not quoted (0)
CL Item
quoted (1)
Item Group
Critical phase: PCR: Sites of virological testing
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0032520 (UMLS CUI-3)
C0011900 (UMLS CUI-4)
C0205145 (UMLS CUI-5)
C5203676 (UMLS CUI-6)
C0599616 (UMLS CUI-7)
Item
Blood
integer
C0005767 (UMLS CUI [1])
Blood
Code List
Blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Earlobe capillary blood
integer
C0229315 (UMLS CUI [1,1])
C0229666 (UMLS CUI [1,2])
Blood
Code List
Earlobe capillary blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Bronchoalveolar lavage
integer
C1535502 (UMLS CUI [1])
Bronchoalveolar lavage
Code List
Bronchoalveolar lavage
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Cerebro-spinal fluid
integer
C0007806 (UMLS CUI [1])
Cerebro-spinal fluid
Code List
Cerebro-spinal fluid
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Eyes
integer
C0015392 (UMLS CUI [1])
Conjunctival swab
Code List
Eyes
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Nasopharynx
integer
C0027442 (UMLS CUI [1])
Nasopharynx swab
Code List
Nasopharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Organ biopsy
integer
C0005558 (UMLS CUI [1,1])
C0178784 (UMLS CUI [1,2])
Organ biopsy
Code List
Organ biopsy
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Oropharynx
integer
C1280659 (UMLS CUI [1])
Oropharynx swab
Code List
Oropharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Pharyngeal fluid specimen
integer
C0031354 (UMLS CUI [1,1])
C1704353 (UMLS CUI [1,2])
Pharyngeal fluid specimen
Code List
Pharyngeal fluid specimen
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Sputum
integer
C0038056 (UMLS CUI [1])
Sputum
Code List
Sputum
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Stool
integer
C0015733 (UMLS CUI [1])
Stool
Code List
Stool
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Tracheal aspirate
integer
C1547923 (UMLS CUI [1])
Tracheal aspirate
Code List
Tracheal aspirate
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Urine
integer
C0042036 (UMLS CUI [1])
Urine
Code List
Urine
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Critical phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599161 (UMLS CUI-3)
C5203074 (UMLS CUI-4)
C5203676 (UMLS CUI-5)
C0439056 (UMLS CUI-6)
C0449243 (UMLS CUI-7)
Item
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles
Code List
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
CL Item
Swab negative (1)
CL Item
Swab positive, number of cycles: (2)
CL Item
No pharyngeal swab (3)
CL Item
Unknown (4)
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles - specification
Item
If Swab positive, number of cycles:
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
C2348235 (UMLS CUI [1,6])
Item Group
Critical phase: Viral coinfections
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0275524 (UMLS CUI-3)
C0521026 (UMLS CUI-4)
Item
Influenza virus
integer
C0275524 (UMLS CUI [1,1])
C0021400 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
Influenza virus
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
RSV (respiratory syncytial virus)
integer
C0275524 (UMLS CUI [1,1])
C0035236 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
RSV (respiratory syncytial virus)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
HSV (Herpes simplex virus)
integer
C0275524 (UMLS CUI [1,1])
C0319232 (UMLS CUI [1,2])
Coinfection: Influenza virus
Code List
HSV (Herpes simplex virus)
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Other
integer
C0275524 (UMLS CUI [1,1])
C0521026 (UMLS CUI [1,2])
C0205394 (UMLS CUI [1,3])
Coinfection: Influenza virus
Code List
Other
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
If Other, please specify
integer
C0275524 (UMLS CUI [1,1])
C0521026 (UMLS CUI [1,2])
C3845569 (UMLS CUI [1,3])
Coinfection: Influenza virus
Code List
If Other, please specify
CL Item
Yes (1)
CL Item
No (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Critical phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5397186 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
Item
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
integer
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
Anti-SARS-CoV-2 antibodies (IgG) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
CL Item
IgG-titer positive, titer: (1)
CL Item
IgG-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgG) titer specification
Item
If IgG-titer positive, titer:
text
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
Critical phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5203676 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
C0020835 (UMLS CUI-5)
Item
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
integer
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
Anti-SARS-CoV-2 antibodies (IgA) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
CL Item
IgA-titer positive, titer: (1)
CL Item
IgA-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgA) titer specification
Item
If IgA-titer positive, titer:
text
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Critical phase: Laboratory values
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
Item
GOT/AST
integer
C0201899 (UMLS CUI [1])
GOT/AST
Code List
GOT/AST
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
GPT/ALT
integer
C0201836 (UMLS CUI [1])
GPT/ALT
Code List
GPT/ALT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Gamma-GT
integer
C0202035 (UMLS CUI [1])
Gamma-GT
Code List
Gamma-GT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Bilirubine
integer
C0344395 (UMLS CUI [1])
Bilirubine
Code List
Bilirubine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lipase
integer
C0373670 (UMLS CUI [1])
Lipase
Code List
Lipase
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Troponine T
integer
C0523952 (UMLS CUI [1])
Troponine T
Code List
Troponine T
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Creatinine
integer
C0201975 (UMLS CUI [1])
Creatinine
Code List
Creatinine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Urea
integer
C0523961 (UMLS CUI [1])
Urea
Code List
Urea
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDH
integer
C0202113 (UMLS CUI [1])
LDH
Code List
LDH
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
D-dimer
integer
C2826333 (UMLS CUI [1])
D-dimer
Code List
D-dimer
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Fibrinogen
integer
C0337428 (UMLS CUI [1])
Fibrinogen
Code List
Fibrinogen
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Triglyceride
integer
C0202236 (UMLS CUI [1])
Triglyceride
Code List
Triglyceride
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDL
integer
C0428474 (UMLS CUI [1])
Triglyceride
Code List
LDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
HDL
integer
C0428472 (UMLS CUI [1])
Triglyceride
Code List
HDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Serum albumin
integer
C0523465 (UMLS CUI [1])
Triglyceride
Code List
Serum albumin
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Critical phase: Hematological Values
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0018941 (UMLS CUI-3)
Item
Leukocytes
integer
C0023508 (UMLS CUI [1])
(Leukocytes) 17944
Code List
Leukocytes
CL Item
< 1,000 /µL (1)
CL Item
1,000 - 3999 /µL (2)
CL Item
4,000 - 7,999 /µL (3)
CL Item
8,000 - 11,999 /µL (4)
CL Item
12,000 - 15,999 /µL6 = 16,000 - 19,999 /µL (5)
CL Item
>=20,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lymphocytes
integer
C0200635 (UMLS CUI [1])
(Lymphocytes) 17945
Code List
Lymphocytes
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 799 /µL (4)
CL Item
800 - 1499 /µL (5)
CL Item
1500 - 2,999 /µL (6)
CL Item
>=3,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Neutrophils
integer
C0200633 (UMLS CUI [1])
(Neutrophils) 17946
Code List
Neutrophils
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 1,999 /µL (4)
CL Item
2,000 - 4,999 /µL (5)
CL Item
5,000 - 8,999 /µL (6)
CL Item
>=9,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Platelets
integer
C0032181 (UMLS CUI [1])
(Platelets) 17947
Code List
Platelets
CL Item
< 10,000 /µL (1)
CL Item
10,000 - 49,999 /µL (2)
CL Item
50,000 - 119,999 /µL (3)
CL Item
120,000 - 449,999 /µL (4)
CL Item
450,000 - 799,999 /µL (5)
CL Item
800,000 - 1,199,999 /µL (6)
CL Item
>=1,200,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Hemoglobin
integer
C0518015 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Hemoglobin
CL Item
< 6 g/dL (< 3.72) (1)
CL Item
6 - 7.9 g/dL (3.72 - 4.9) (2)
CL Item
8 - 9.9 g/dL (4.91 - 6.15) (3)
CL Item
10 - 11.9 g/dL (6.16 - 7.39) (4)
CL Item
12 - 14.9 g/dL (7.4 - 9.25) (5)
CL Item
>= 15 g/dL (> 9.25) (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
Eosinophils
integer
C0200638 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Eosinophils
CL Item
< 100 /µL (1)
CL Item
100 - 199 /µL (2)
CL Item
200 - 299 /µL (3)
CL Item
300 - 399 /µL (4)
CL Item
400 - 499 /µL (5)
CL Item
500 - 599 /µL (6)
CL Item
>=600 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Critical phase: Other laboratory results
C1511545 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
C0205394 (UMLS CUI-4)
Item
CRP (highest)
integer
C0201657 (UMLS CUI [1])
BL_CRP
Code List
CRP (highest)
CL Item
< 3 mg/L (1)
CL Item
3- 29 mg/L (2)
CL Item
30 - 69 mg/L (3)
CL Item
70 - 119 mg/L (4)
CL Item
120 - 179 mg/L (5)
CL Item
180 - 249 mg/L (6)
CL Item
> 249 mg/L (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Procalcitonin (PCT) (highest)
integer
C1535922 (UMLS CUI [1])
BL_CRP
Code List
Procalcitonin (PCT) (highest)
CL Item
< 0.005 ng/ml (1)
CL Item
0.005 - 0.5 ng/ml (2)
CL Item
0.51 - 2 ng/ml (3)
CL Item
2.1 - 10 ng/ml (4)
CL Item
> 10 ng/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Interleukin 6 (highest)
integer
C0919829 (UMLS CUI [1])
BL_IL6
Code List
Interleukin 6 (highest)
CL Item
< 1.8 pg/mL (1)
CL Item
1.8 - 49 pg/mL (2)
CL Item
50 - 199 pg/mL (3)
CL Item
200 - 499 pg/mL (4)
CL Item
500 - 999 pg/mL (5)
CL Item
1000 - 4999 pg/mL (6)
CL Item
> 4999 pg/mL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
sIL2R (highest)
integer
C4764096 (UMLS CUI [1])
BL_sIL2R
Code List
sIL2R (highest)
CL Item
< 2.500 U/ml (1)
CL Item
2.500 - 10.000 U/ml (2)
CL Item
> 10.000 U/ml (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
Ferritin (highest)
integer
C0373607 (UMLS CUI [1])
BL_Ferritin
Code List
Ferritin (highest)
CL Item
< 300 ng/ml (1)
CL Item
300 - 499 ng/ml (2)
CL Item
500 - 999 ng/ml (3)
CL Item
1000 - 1999 ng/ml (4)
CL Item
2000 - 4000 ng/ml (5)
CL Item
> 4000 ng/ml (6)
CL Item
Unknown (8)
CL Item
Not done (7)
Item
INR (highest)
integer
C0525032 (UMLS CUI [1])
INR
Code List
INR (highest)
CL Item
< 1.25 (1)
CL Item
1.25 - 2 (2)
CL Item
2 - 3.5 (3)
CL Item
> 3.5 (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Activated partial thromboplastin time (aPTT) (highest)
integer
C0030605 (UMLS CUI [1])
Activated partial thromboplastin time (aPTT)
Code List
Activated partial thromboplastin time (aPTT) (highest)
CL Item
< 25 s (1)
CL Item
25 - 39 s (2)
CL Item
40 - 54 s (3)
CL Item
55 - 69 s (4)
CL Item
70 - 84 s (5)
CL Item
> 84 s (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
CK (Creatine Kinase) (highest)
integer
C0201973 (UMLS CUI [1])
CK (Creatine Kinase)
Code List
CK (Creatine Kinase) (highest)
CL Item
< 200 U/l (< 3.34 nmol/sl) (1)
CL Item
200 - 500 U/l (3.34 - 8.36 nmol/sl) (2)
CL Item
501 - 1000 U/l (8.37 - 16.72 nmol/sl) (3)
CL Item
1001 - 2000 U/l (16.73 - 33.44 nmol/sl) (4)
CL Item
> 2000 U/l (> 33.44 nmol/sl) (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
CK-MB in reference to above indicated CK
integer
C0428616 (UMLS CUI [1])
CK-MB/CK ratio
Code List
CK-MB in reference to above indicated CK
CL Item
< 6 % (1)
CL Item
6-25 % (2)
CL Item
> 25 % (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
NT-pro-BNP (highest)
integer
C3272900 (UMLS CUI [1])
NT-pro-BNP
Code List
NT-pro-BNP (highest)
CL Item
0 - 200 pg/ml (1)
CL Item
201 - 500 pg/ml (2)
CL Item
501 - 1000 pg/ml (3)
CL Item
1001 - 2000 pg/ml (4)
CL Item
> 2000 pg/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Antithrombin III activity (lowest)
integer
C0200416 (UMLS CUI [1])
Antithrombin III activity
Code List
Antithrombin III activity (lowest)
CL Item
< 70 % (1)
CL Item
70 - 89 % (2)
CL Item
90 - 109 % (3)
CL Item
>= 110 % (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item Group
Recovery phase: Types of virological testing
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599616 (UMLS CUI-3)
C0332307 (UMLS CUI-4)
Item
PCR
integer
C0032520 (UMLS CUI [1])
PCR
Code List
PCR
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Rapid test
integer
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
PCR
Code List
Rapid test
CL Item
not quoted (0)
CL Item
quoted (1)
Rapid test, please specify
Item
Rapid test, please specify
text
C0022885 (UMLS CUI [1,1])
C0456962 (UMLS CUI [1,2])
C1521902 (UMLS CUI [1,3])
Item
Serology
integer
C0036743 (UMLS CUI [1])
PCR
Code List
Serology
CL Item
not quoted (0)
CL Item
quoted (1)
Item
None
integer
C1298908 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
None
CL Item
not quoted (0)
CL Item
quoted (1)
Item
Unknown
integer
C0439673 (UMLS CUI [1,1])
C0599616 (UMLS CUI [1,2])
PCR
Code List
Unknown
CL Item
not quoted (0)
CL Item
quoted (1)
Item Group
Recovery phase: PCR: Sites of virological testing
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0032520 (UMLS CUI-3)
C0011900 (UMLS CUI-4)
C0205145 (UMLS CUI-5)
C5203676 (UMLS CUI-6)
C0599616 (UMLS CUI-7)
Item
Blood
integer
C0005767 (UMLS CUI [1])
Blood
Code List
Blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Earlobe capillary blood
integer
C0229315 (UMLS CUI [1,1])
C0229666 (UMLS CUI [1,2])
Blood
Code List
Earlobe capillary blood
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Bronchoalveolar lavage
integer
C1535502 (UMLS CUI [1])
Bronchoalveolar lavage
Code List
Bronchoalveolar lavage
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Cerebro-spinal fluid
integer
C0007806 (UMLS CUI [1])
Cerebro-spinal fluid
Code List
Cerebro-spinal fluid
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Eyes
integer
C0015392 (UMLS CUI [1])
Conjunctival swab
Code List
Eyes
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Nasopharynx
integer
C0027442 (UMLS CUI [1])
Nasopharynx swab
Code List
Nasopharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Organ biopsy
integer
C0005558 (UMLS CUI [1,1])
C0178784 (UMLS CUI [1,2])
Organ biopsy
Code List
Organ biopsy
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Oropharynx
integer
C1280659 (UMLS CUI [1])
Oropharynx swab
Code List
Oropharynx
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Pharyngeal fluid specimen
integer
C0031354 (UMLS CUI [1,1])
C1704353 (UMLS CUI [1,2])
Pharyngeal fluid specimen
Code List
Pharyngeal fluid specimen
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Sputum
integer
C0038056 (UMLS CUI [1])
Sputum
Code List
Sputum
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Stool
integer
C0015733 (UMLS CUI [1])
Stool
Code List
Stool
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Tracheal aspirate
integer
C1547923 (UMLS CUI [1])
Tracheal aspirate
Code List
Tracheal aspirate
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item
Urine
integer
C0042036 (UMLS CUI [1])
Urine
Code List
Urine
CL Item
Negative (1)
CL Item
Positive (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Item Group
Recovery phase: If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0599161 (UMLS CUI-3)
C5203074 (UMLS CUI-4)
C5203676 (UMLS CUI-5)
C0439056 (UMLS CUI-6)
C0449243 (UMLS CUI-7)
Item
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles
Code List
If pharyngeal swabs were performed at first positive SARS-CoV-2 testing: lowest detected number of PCR cycles
CL Item
Swab negative (1)
CL Item
Swab positive, number of cycles: (2)
CL Item
No pharyngeal swab (3)
CL Item
Unknown (4)
If pharyngeal swabs performed at SARS-CoV-2 testing: number of PCR cycles - specification
Item
If Swab positive, number of cycles:
integer
C0599161 (UMLS CUI [1,1])
C5203074 (UMLS CUI [1,2])
C5203676 (UMLS CUI [1,3])
C0439056 (UMLS CUI [1,4])
C0449243 (UMLS CUI [1,5])
C2348235 (UMLS CUI [1,6])
Item Group
Recovery phase: If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5397186 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
Item
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
integer
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
Anti-SARS-CoV-2 antibodies (IgG) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgG) were measured: highest titer.
CL Item
IgG-titer positive, titer: (1)
CL Item
IgG-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgG) titer specification
Item
If IgG-titer positive, titer:
text
C5397186 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C2348235 (UMLS CUI [1,3])
Item Group
Recovery phase: If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C5203676 (UMLS CUI-3)
C0474643 (UMLS CUI-4)
C0020835 (UMLS CUI-5)
Item
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
integer
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
Anti-SARS-CoV-2 antibodies (IgA) titer measurement
Code List
If Anti-SARS-CoV-2 antibodies (IgA) were measured: highest titer.
CL Item
IgA-titer positive, titer: (1)
CL Item
IgA-titer negative (2)
CL Item
Not done (3)
CL Item
Unknown (4)
Anti-SARS-CoV-2 antibodies (IgA) titer specification
Item
If IgA-titer positive, titer:
text
C5203676 (UMLS CUI [1,1])
C0474643 (UMLS CUI [1,2])
C0020835 (UMLS CUI [1,3])
C2348235 (UMLS CUI [1,4])
Item Group
Recovery phase: Laboratory values
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
Item
GOT/AST
integer
C0201899 (UMLS CUI [1])
GOT/AST
Code List
GOT/AST
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
GPT/ALT
integer
C0201836 (UMLS CUI [1])
GPT/ALT
Code List
GPT/ALT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Gamma-GT
integer
C0202035 (UMLS CUI [1])
Gamma-GT
Code List
Gamma-GT
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Bilirubine
integer
C0344395 (UMLS CUI [1])
Bilirubine
Code List
Bilirubine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lipase
integer
C0373670 (UMLS CUI [1])
Lipase
Code List
Lipase
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Troponine T
integer
C0523952 (UMLS CUI [1])
Troponine T
Code List
Troponine T
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Creatinine
integer
C0201975 (UMLS CUI [1])
Creatinine
Code List
Creatinine
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Urea
integer
C0523961 (UMLS CUI [1])
Urea
Code List
Urea
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDH
integer
C0202113 (UMLS CUI [1])
LDH
Code List
LDH
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
D-dimer
integer
C2826333 (UMLS CUI [1])
D-dimer
Code List
D-dimer
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Fibrinogen
integer
C0337428 (UMLS CUI [1])
Fibrinogen
Code List
Fibrinogen
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Triglyceride
integer
C0202236 (UMLS CUI [1])
Triglyceride
Code List
Triglyceride
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
LDL
integer
C0428474 (UMLS CUI [1])
Triglyceride
Code List
LDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
HDL
integer
C0428472 (UMLS CUI [1])
Triglyceride
Code List
HDL
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Serum albumin
integer
C0523465 (UMLS CUI [1])
Triglyceride
Code List
Serum albumin
CL Item
< LLN (1)
CL Item
Normal (LLN - ULN) (2)
CL Item
> ULN <= 2x ULN (3)
CL Item
> 2x ULN <= 5x ULN (4)
CL Item
> 5x ULN <= 10x ULN (5)
CL Item
> 10x ULN <= 20x ULN (6)
CL Item
> 20x ULN (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Recovery phase: Hematological Values
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C0018941 (UMLS CUI-3)
Item
Leukocytes
integer
C0023508 (UMLS CUI [1])
(Leukocytes) 17944
Code List
Leukocytes
CL Item
< 1,000 /µL (1)
CL Item
1,000 - 3999 /µL (2)
CL Item
4,000 - 7,999 /µL (3)
CL Item
8,000 - 11,999 /µL (4)
CL Item
12,000 - 15,999 /µL6 = 16,000 - 19,999 /µL (5)
CL Item
>=20,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Lymphocytes
integer
C0200635 (UMLS CUI [1])
(Lymphocytes) 17945
Code List
Lymphocytes
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 799 /µL (4)
CL Item
800 - 1499 /µL (5)
CL Item
1500 - 2,999 /µL (6)
CL Item
>=3,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Neutrophils
integer
C0200633 (UMLS CUI [1])
(Neutrophils) 17946
Code List
Neutrophils
CL Item
< 100 /µL (1)
CL Item
100 - 299 /µL (2)
CL Item
300 - 499 /µL (3)
CL Item
500 - 1,999 /µL (4)
CL Item
2,000 - 4,999 /µL (5)
CL Item
5,000 - 8,999 /µL (6)
CL Item
>=9,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Platelets
integer
C0032181 (UMLS CUI [1])
(Platelets) 17947
Code List
Platelets
CL Item
< 10,000 /µL (1)
CL Item
10,000 - 49,999 /µL (2)
CL Item
50,000 - 119,999 /µL (3)
CL Item
120,000 - 449,999 /µL (4)
CL Item
450,000 - 799,999 /µL (5)
CL Item
800,000 - 1,199,999 /µL (6)
CL Item
>=1,200,000 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Hemoglobin
integer
C0518015 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Hemoglobin
CL Item
< 6 g/dL (< 3.72) (1)
CL Item
6 - 7.9 g/dL (3.72 - 4.9) (2)
CL Item
8 - 9.9 g/dL (4.91 - 6.15) (3)
CL Item
10 - 11.9 g/dL (6.16 - 7.39) (4)
CL Item
12 - 14.9 g/dL (7.4 - 9.25) (5)
CL Item
>= 15 g/dL (> 9.25) (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
Eosinophils
integer
C0200638 (UMLS CUI [1])
(Hemoglobin) 17948
Code List
Eosinophils
CL Item
< 100 /µL (1)
CL Item
100 - 199 /µL (2)
CL Item
200 - 299 /µL (3)
CL Item
300 - 399 /µL (4)
CL Item
400 - 499 /µL (5)
CL Item
500 - 599 /µL (6)
CL Item
>=600 /µL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item Group
Recovery phase: Other laboratory results
C2004454 (UMLS CUI-1)
C0205390 (UMLS CUI-2)
C1254595 (UMLS CUI-3)
C0205394 (UMLS CUI-4)
Item
CRP (highest)
integer
C0201657 (UMLS CUI [1])
BL_CRP
Code List
CRP (highest)
CL Item
< 3 mg/L (1)
CL Item
3- 29 mg/L (2)
CL Item
30 - 69 mg/L (3)
CL Item
70 - 119 mg/L (4)
CL Item
120 - 179 mg/L (5)
CL Item
180 - 249 mg/L (6)
CL Item
> 249 mg/L (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
Procalcitonin (PCT) (highest)
integer
C1535922 (UMLS CUI [1])
BL_CRP
Code List
Procalcitonin (PCT) (highest)
CL Item
< 0.005 ng/ml (1)
CL Item
0.005 - 0.5 ng/ml (2)
CL Item
0.51 - 2 ng/ml (3)
CL Item
2.1 - 10 ng/ml (4)
CL Item
> 10 ng/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Interleukin 6 (highest)
integer
C0919829 (UMLS CUI [1])
BL_IL6
Code List
Interleukin 6 (highest)
CL Item
< 1.8 pg/mL (1)
CL Item
1.8 - 49 pg/mL (2)
CL Item
50 - 199 pg/mL (3)
CL Item
200 - 499 pg/mL (4)
CL Item
500 - 999 pg/mL (5)
CL Item
1000 - 4999 pg/mL (6)
CL Item
> 4999 pg/mL (7)
CL Item
Not done (8)
CL Item
Unknown (9)
Item
sIL2R (highest)
integer
C4764096 (UMLS CUI [1])
BL_sIL2R
Code List
sIL2R (highest)
CL Item
< 2.500 U/ml (1)
CL Item
2.500 - 10.000 U/ml (2)
CL Item
> 10.000 U/ml (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
Ferritin (highest)
integer
C0373607 (UMLS CUI [1])
BL_Ferritin
Code List
Ferritin (highest)
CL Item
< 300 ng/ml (1)
CL Item
300 - 499 ng/ml (2)
CL Item
500 - 999 ng/ml (3)
CL Item
1000 - 1999 ng/ml (4)
CL Item
2000 - 4000 ng/ml (5)
CL Item
> 4000 ng/ml (6)
CL Item
Unknown (8)
CL Item
Not done (7)
Item
INR (highest)
integer
C0525032 (UMLS CUI [1])
INR
Code List
INR (highest)
CL Item
< 1.25 (1)
CL Item
1.25 - 2 (2)
CL Item
2 - 3.5 (3)
CL Item
> 3.5 (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item
Activated partial thromboplastin time (aPTT) (highest)
integer
C0030605 (UMLS CUI [1])
Activated partial thromboplastin time (aPTT)
Code List
Activated partial thromboplastin time (aPTT) (highest)
CL Item
< 25 s (1)
CL Item
25 - 39 s (2)
CL Item
40 - 54 s (3)
CL Item
55 - 69 s (4)
CL Item
70 - 84 s (5)
CL Item
> 84 s (6)
CL Item
Not done (7)
CL Item
Unknown (8)
Item
CK (Creatine Kinase) (highest)
integer
C0201973 (UMLS CUI [1])
CK (Creatine Kinase)
Code List
CK (Creatine Kinase) (highest)
CL Item
< 200 U/l (< 3.34 nmol/sl) (1)
CL Item
200 - 500 U/l (3.34 - 8.36 nmol/sl) (2)
CL Item
501 - 1000 U/l (8.37 - 16.72 nmol/sl) (3)
CL Item
1001 - 2000 U/l (16.73 - 33.44 nmol/sl) (4)
CL Item
> 2000 U/l (> 33.44 nmol/sl) (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
CK-MB in reference to above indicated CK
integer
C0428616 (UMLS CUI [1])
CK-MB/CK ratio
Code List
CK-MB in reference to above indicated CK
CL Item
< 6 % (1)
CL Item
6-25 % (2)
CL Item
> 25 % (3)
CL Item
Not done (4)
CL Item
Unknown (5)
Item
NT-pro-BNP (highest)
integer
C3272900 (UMLS CUI [1])
NT-pro-BNP
Code List
NT-pro-BNP (highest)
CL Item
0 - 200 pg/ml (1)
CL Item
201 - 500 pg/ml (2)
CL Item
501 - 1000 pg/ml (3)
CL Item
1001 - 2000 pg/ml (4)
CL Item
> 2000 pg/ml (5)
CL Item
Not done (6)
CL Item
Unknown (7)
Item
Antithrombin III activity (lowest)
integer
C0200416 (UMLS CUI [1])
Antithrombin III activity
Code List
Antithrombin III activity (lowest)
CL Item
< 70 % (1)
CL Item
70 - 89 % (2)
CL Item
90 - 109 % (3)
CL Item
>= 110 % (4)
CL Item
Not done (5)
CL Item
Unknown (6)
Item Group
Is data entry for this section finished?
C4684556 (UMLS CUI-1)
C1828479 (UMLS CUI-2)
C0205197 (UMLS CUI-3)
Item
Is data entry for this section finished?
integer
C4684556 (UMLS CUI [1,1])
C1828479 (UMLS CUI [1,2])
C0205197 (UMLS CUI [1,3])
Is data entry for this section finished?
Code List
Is data entry for this section finished?
CL Item
Yes (1)
CL Item
No (2)
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