ID

35655

Beskrivning

OMOP Common Data Model (CDM) Cohort Definition The COHORT_DEFINITION table contains records defining a Cohort derived from the data through the associated description and syntax and upon instantiation (execution of the algorithm) placed into the COHORT table. Cohorts are a set of subjects that satisfy a given combination of inclusion criteria for a duration of time. The COHORT_DEFINITION table provides a standardized structure for maintaining the rules governing the inclusion of a subject into a cohort, and can store operational programming code to instantiate the cohort within the OMOP Common Data Model. OMOP Common Data Model Version 6.0 Specifications 11October2018. The Observational Medical Outcomes Partnership (OMOP) was a public-private partnership established to inform the appropriate use of observational healthcare databases for studying the effects of medical products. © 2014 Observational Health Data Sciences and Informatics This work is based on work by the Observational Medical Outcomes Partnership (OMOP) and used under license from the FNIH at http://omop.fnih.org/publiclicense. Version updated on 14.03.2019, from https://github.com/OHDSI/CommonDataModel/wiki/COHORT_DEFINITION The subject_concept_id determines what the individual subjects or entities of the Cohort consists of. In most cases, that would be a Person (patient). But cohorts could also be constructed for Providers, Visits or any other Domain. Note that the Domain is not codified using the alphanumerical domain_id like in the CONCEPT table. Instead, the corresponding Concept is used. The Concepts for each domain can be obtained from the DOMAIN table in the domain_concept_id.

Länk

http://omop.fnih.org/publiclicense

Nyckelord

  1. 2017-01-04 2017-01-04 -
  2. 2019-03-14 2019-03-14 -
Rättsinnehavare

Observational Medical Outcomes Partnership (OMOP)

Uppladdad den

14 mars 2019

DOI

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Licens

Creative Commons BY-NC 3.0

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OMOP Common Data Model (CDM) Cohort Definition

OMOP Common Data Model (CDM) Cohort Definition

Cohort Definition
Beskrivning

Cohort Definition

Alias
UMLS CUI-1
C0599755
UMLS CUI-2
C1704788
Cohort definition ID
Beskrivning

A unique identifier for each cohort.

Datatyp

integer

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1704788
UMLS CUI [1,3]
C1300638
Cohort definition name
Beskrivning

A short description of the cohort. (Type varchar(255))

Datatyp

text

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1704788
UMLS CUI [1,3]
C0027365
Cohort definition description
Beskrivning

A complete description of the cohort definition (Type varchar(MAX))

Datatyp

text

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1704788
UMLS CUI [1,3]
C0678257
Definition type concept ID
Beskrivning

Type to define what kind of cohort definition the record represents and how the syntax may be executed

Datatyp

integer

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1704788
UMLS CUI [1,3]
C0332307
UMLS CUI [1,4]
C0178566
UMLS CUI [1,5]
C1300638
Cohort definition syntax
Beskrivning

Syntax to operationalize the cohort definition. The cohort_definition_syntax does not prescribe any specific syntax or programming language. Typically, it would be any flavor SQL, a cohort definition language, or a free-text description of the algorithm. (Type varchar(MAX))

Datatyp

text

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1704788
UMLS CUI [1,3]
C0597547
Subject concept ID
Beskrivning

A foreign key to the concept to which defines the domain of subjects that are members of the cohort (e.g., person, provider, visit).

Datatyp

integer

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1707806
UMLS CUI [1,3]
C0178566
UMLS CUI [1,4]
C1300638
Cohort initiation date
Beskrivning

A date to indicate when the cohort was instantiated in the COHORT table

Datatyp

date

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C1704686
UMLS CUI [1,3]
C0011008

Similar models

OMOP Common Data Model (CDM) Cohort Definition

Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
Cohort Definition
C0599755 (UMLS CUI-1)
C1704788 (UMLS CUI-2)
Cohort definition ID
Item
Cohort definition ID
integer
C0599755 (UMLS CUI [1,1])
C1704788 (UMLS CUI [1,2])
C1300638 (UMLS CUI [1,3])
Cohort definition name
Item
Cohort definition name
text
C0599755 (UMLS CUI [1,1])
C1704788 (UMLS CUI [1,2])
C0027365 (UMLS CUI [1,3])
Cohort definition description
Item
Cohort definition description
text
C0599755 (UMLS CUI [1,1])
C1704788 (UMLS CUI [1,2])
C0678257 (UMLS CUI [1,3])
Definition type concept ID
Item
Definition type concept ID
integer
C0599755 (UMLS CUI [1,1])
C1704788 (UMLS CUI [1,2])
C0332307 (UMLS CUI [1,3])
C0178566 (UMLS CUI [1,4])
C1300638 (UMLS CUI [1,5])
Cohort definition syntax
Item
Cohort definition syntax
text
C0599755 (UMLS CUI [1,1])
C1704788 (UMLS CUI [1,2])
C0597547 (UMLS CUI [1,3])
Subject concept ID
Item
Subject concept ID
integer
C0599755 (UMLS CUI [1,1])
C1707806 (UMLS CUI [1,2])
C0178566 (UMLS CUI [1,3])
C1300638 (UMLS CUI [1,4])
Cohort initiation date
Item
Cohort initiation date
date
C0599755 (UMLS CUI [1,1])
C1704686 (UMLS CUI [1,2])
C0011008 (UMLS CUI [1,3])

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