ID

35319

Beschrijving

OMOP Common Data Model (CDM) Condition Occurrence Conditions are records of a Person suggesting the presence of a disease or medical condition stated as a diagnosis, a sign, or a symptom, which is either observed by a Provider or reported by the patient. Conditions are recorded in different sources and levels of standardization, for example: Medical claims data include diagnoses coded in Source Vocabularies such as ICD-9-CM that are submitted as part of a reimbursement claim for health services. EHRs may capture Person conditions in the form of diagnosis codes or symptoms. OMOP Common Data Model Version 6.0 Specifications 11October2018. The Observational Medical Outcomes Partnership (OMOP) was a public-private partnership established to inform the appropriate use of observational healthcare databases for studying the effects of medical products. © 2014 Observational Health Data Sciences and Informatics Version updated on 28.02.2019, from https://github.com/OHDSI/CommonDataModel/wiki/CONDITION_OCCURENCE. Valid Condition Concepts belong to the 'Condition' domain. Condition records are typically inferred from diagnostic codes recorded in the source data. Such code systems, like ICD-9-CM, ICD-10-CM, Read etc., provide a comprehensive coverage of conditions. However, if the diagnostic code in the source does not define a condition, but rather an observation or a procedure, then such information is not stored in the CONDITION_OCCURRENCE table, but in the respective tables indicated by the domain. Source Condition identifiers are mapped to Standard Concepts for Conditions in the Standardized Vocabularies. When the source code cannot be translated into a Standard Concept, a CONDITION_OCCURRENCE entry is stored with only the corresponding SOURCE_CONCEPT_ID and SOURCE_VALUE, while the CONDITION_CONCEPT_ID is set to 0. Family history and past diagnoses ('history of') are not recorded in the CONDITION_OCCURRENCE table. Instead, they are listed in the OBSERVATION table. Codes written in the process of establishing the diagnosis, such as 'question of' of and 'rule out', are not represented here. Instead, they are listed in the OBSERVATION table, if they are used for analyses. A Condition Occurrence Type is assigned based on the data source and type of condition attribute, for example: ICD-9-CM Primary Diagnosis from inpatient and outpatient claims, ICD-9-CM Secondary Diagnoses from inpatient and outpatient claims, Diagnoses or problems recorded in an EHR. Valid Condition Occurrence Type Concepts belong to the 'Condition Type' vocabulary in the 'Type Concept' domain. The Stop Reason indicates why a Condition is no longer valid with respect to the purpose within the source data. Typical values include 'Discharged', 'Resolved', etc. Note that a Stop Reason does not necessarily imply that the condition is no longer occurring. Condition source codes are typically ICD-9-CM, Read or ICD-10-CM diagnosis codes from medical claims or discharge status/visit diagnosis codes from EHRs. Presently, there is no designated vocabulary, domain, or class that represents condition status. For more information, please see: https://github.com/OHDSI/CommonDataModel/wiki/CONDITION_OCCURENCE

Link

https://github.com/OHDSI/CommonDataModel/wiki/CONDITION_OCCURENCE

Trefwoorden

Versies (4)
  1. 04-01-17 04-01-17 -
  2. 11-02-19 11-02-19 -
  3. 12-02-19 12-02-19 -
  4. 28-02-19 28-02-19 -
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Observational Medical Outcomes Partnership (OMOP)

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28 februari 2019

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OMOP Common Data Model (CDM) Condition Occurrence

Engels

OMOP Common Data Model (CDM) Condition Occurrence

1 Formulieren  
Condition Occurrence
Beschrijving

Condition Occurrence

Alias
UMLS CUI-1
C0012634
UMLS CUI-2
C2745955
Condition Occurrence ID
Beschrijving

A unique identifier for each condition occurrence event. (Type bigint)

Datatype

integer

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C2745955
UMLS CUI [1,3]
C1300638
Person ID
Beschrijving

A foreign key identifier to the person who is experiencing the condition. The demographic details of that person are stored in the person table. (Type bigint)

Datatype

integer

Alias
UMLS CUI [1]
C2348585
Condition concept ID
Beschrijving

A foreign key that refers to a standard condition concept identifier in the Standardized Vocabularies belonging to the 'Condition' domain.

Datatype

integer

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0178566
UMLS CUI [1,3]
C1300638
Condition start date
Beschrijving

The date when the instance of the condition is recorded.

Datatype

date

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0011008
Condition start datetime
Beschrijving

The date and time when the instance of the Condition is recorded.

Datatype

datetime

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C1301880
Condition end date
Beschrijving

The date when the instance of the condition is considered to have ended.

Datatype

date

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0011008
Condition end datetime
Beschrijving

The date and time when the instance of the Condition is considered to have ended.

Datatype

datetime

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C1522314
Condition type concept ID
Beschrijving

A foreign key to the predefined concept identifier in the Standardized Vocabularies reflecting the source data from which the condition was recorded, the level of standardization, and the type of occurrence. These belong to the 'Condition Type' vocabulary

Datatype

integer

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0332307
UMLS CUI [1,3]
C0178566
UMLS CUI [1,4]
C1300638
Condition status concept ID
Beschrijving

A foreign key that refers to a Standard Concept identifier in the Standardized Vocabularies reflecting the point of care at which the Condition was diagnosed.

Datatype

integer

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0449438
UMLS CUI [1,3]
C0178566
UMLS CUI [1,4]
C1300638
Stop reason
Beschrijving

The reason that the Condition was no longer present, as indicated in the source data. (Type varchar(20))

Datatype

text

Alias
UMLS CUI [1,1]
C0392360
UMLS CUI [1,2]
C1947925
UMLS CUI [1,3]
C0920316
UMLS CUI [1,4]
C0012634
Provider ID
Beschrijving

A foreign key to the Provider in the PROVIDER table who was responsible for capturing (diagnosing) the Condition.

Datatype

integer

Alias
UMLS CUI [1,1]
C1138603
UMLS CUI [1,2]
C1300638
Visit occurrence ID
Beschrijving

A foreign key to the visit in the VISIT_OCCURRENCE table during which the Condition was determined (diagnosed).

Datatype

integer

Alias
UMLS CUI [1,1]
C1512346
UMLS CUI [1,2]
C2745955
UMLS CUI [1,3]
C1300638
Visit detail ID
Beschrijving

A foreign key to the visit in the VISIT_DETAIL table during which the Condition was determined (diagnosed).

Datatype

integer

Alias
UMLS CUI [1,1]
C1512346
UMLS CUI [1,2]
C2745955
UMLS CUI [1,3]
C1300638
Condition source value
Beschrijving

The source code for the condition as it appears in the source data. This code is mapped to a standard condition concept in the Standardized Vocabularies and the original code is stored here for reference. (ytpe varchar(50))

Datatype

text

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0449416
UMLS CUI [1,3]
C1522609
Condition source concept ID
Beschrijving

A foreign key to a condition concept that refers to the code used in the source.

Datatype

integer

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0449416
UMLS CUI [1,3]
C0178566
UMLS CUI [1,4]
C1300638
Condition status source value
Beschrijving

The source code for the condition status as it appears in the source data. This code is mapped to a Standard Concept in the Standardized Vocabularies and the original code is stored here for reference. (Type varchar(50))

Datatype

text

Alias
UMLS CUI [1,1]
C0012634
UMLS CUI [1,2]
C0449438
UMLS CUI [1,3]
C0449416
UMLS CUI [1,4]
C1522609
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Similar models

OMOP Common Data Model (CDM) Condition Occurrence

1 Formulieren
Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
Condition Occurrence
C0012634 (UMLS CUI-1)
C2745955 (UMLS CUI-2)
Condition Occurrence ID
Item
Condition Occurrence ID
integer
C0012634 (UMLS CUI [1,1])
C2745955 (UMLS CUI [1,2])
C1300638 (UMLS CUI [1,3])
Person ID
Item
Person ID
integer
C2348585 (UMLS CUI [1])
Condition concept ID
Item
Condition concept ID
integer
C0012634 (UMLS CUI [1,1])
C0178566 (UMLS CUI [1,2])
C1300638 (UMLS CUI [1,3])
Condition start date
Item
Condition start date
date
C0012634 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
Condition start datetime
Item
Condition start datetime
datetime
C0012634 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C1301880 (UMLS CUI [1,3])
Condition end date
Item
Condition end date
date
C0012634 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
Condition end datetime
Item
Condition end datetime
datetime
C0012634 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C1522314 (UMLS CUI [1,3])
Condition type concept ID
Item
Condition type concept ID
integer
C0012634 (UMLS CUI [1,1])
C0332307 (UMLS CUI [1,2])
C0178566 (UMLS CUI [1,3])
C1300638 (UMLS CUI [1,4])
Condition status concept ID
Item
Condition status concept ID
integer
C0012634 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
C0178566 (UMLS CUI [1,3])
C1300638 (UMLS CUI [1,4])
Stop reason
Item
Stop reason
text
C0392360 (UMLS CUI [1,1])
C1947925 (UMLS CUI [1,2])
C0920316 (UMLS CUI [1,3])
C0012634 (UMLS CUI [1,4])
Provider ID
Item
Provider ID
integer
C1138603 (UMLS CUI [1,1])
C1300638 (UMLS CUI [1,2])
Visit occurrence ID
Item
Visit occurrence ID
integer
C1512346 (UMLS CUI [1,1])
C2745955 (UMLS CUI [1,2])
C1300638 (UMLS CUI [1,3])
Visit detail ID
Item
Visit detail ID
integer
C1512346 (UMLS CUI [1,1])
C2745955 (UMLS CUI [1,2])
C1300638 (UMLS CUI [1,3])
Condition source value
Item
Condition source value
text
C0012634 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
C1522609 (UMLS CUI [1,3])
Condition source concept ID
Item
Condition source concept ID
integer
C0012634 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
C0178566 (UMLS CUI [1,3])
C1300638 (UMLS CUI [1,4])
Condition status source value
Item
Condition status source value
text
C0012634 (UMLS CUI [1,1])
C0449438 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
C1522609 (UMLS CUI [1,4])
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