ID

14688

Description

This self-administered protocol asks respondents to indicate the year of diagnosis for clinician-diagnosed illnesses. The respondent is also asked to provide the year of first diagnosis. ODM derived from: https://cde.nlm.nih.gov Primary source: https://www.phenxtoolkit.org/ Recent publication: Hendershot, T., Pan, H., Haines, J., Harlan, W.R., Marazita, M.L., McCarty, C.A., Ramos, E.M., and Hamilton, C.M. (2015) Using the PhenX toolkit to add standard measures to a study. Curr. Protoc. Hum. Genet. 86:1.21.1-1.21.17. doi: 10.1002/0471142905.hg0121s86 Permission to publish granted by Carol M. Hamilton.

Link

https://cde.nlm.nih.gov

Keywords

Versions (1)
  1. 4/26/16 4/26/16 -
Uploaded on

April 26, 2016

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License

Creative Commons BY-NC 3.0
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Pre-existing Conditions Associated with Cancer Protocol PhenX Toolkit

English

Pre-existing Conditions Associated with Cancer Protocol PhenX Toolkit

1 forms  
PhenX - pre-existing cancer conditions protocol
Description

PhenX - pre-existing cancer conditions protocol

Alias
UMLS CUI-1
C3169654
Clinician-diagnosed illness [PhenX]
Description

diagnosed illness

Data type

integer

Alias
UMLS CUI [1]
C0011900
Have you had any of these clinician-diagnosed illnesses? Myocardial infarction (heart attack)?
Description

pre-existing condition

Data type

boolean

Alias
UMLS CUI [1]
C3173166
Year of Diagnosis, Myocardial infarction (heart attack)?
Description

pre-existing condition year

Data type

integer

Alias
UMLS CUI [1,1]
C0521987
UMLS CUI [1,2]
C0439234
Confirmed angiography?
Description

angina pectoris by angiography

Data type

boolean

Alias
UMLS CUI [1,1]
C0002962
UMLS CUI [1,2]
C0002971
Confirmed by breast biopsy?
Description

fibrocystic by breast biopsy

Data type

boolean

Alias
UMLS CUI [1,1]
C0010674
UMLS CUI [1,2]
C0405352
Confirmed by aspiration?
Description

fibrocystic by aspiration

Data type

boolean

Alias
UMLS CUI [1,1]
C0010674
UMLS CUI [1,2]
C0700198
Specify site of other cancer.
Description

site of other cancer

Data type

text

Alias
UMLS CUI [1,1]
C0006826
UMLS CUI [1,2]
C2945843
Did you have symptoms?
Description

gallstones symptoms

Data type

boolean

Alias
UMLS CUI [1,1]
C0242216
UMLS CUI [1,2]
C1457887
How diagnosed?
Description

method gallstones diagnosed

Data type

integer

Alias
UMLS CUI [1,1]
C0242216
UMLS CUI [1,2]
C0011900
Confirmed by laparoscopy?
Description

endometriosis by laparoscopy

Data type

boolean

Alias
UMLS CUI [1,1]
C0014175
UMLS CUI [1,2]
C0031150
Confirmed by pelvic exam?
Description

uterine fibroids by pelvic exam

Data type

boolean

Alias
UMLS CUI [1,1]
C0042133
UMLS CUI [1,2]
C0747330
Confirmed by ultrasound/hysterectomy?
Description

uterine fibroids by ultrasound

Data type

boolean

Alias
UMLS CUI [1,1]
C0042133
UMLS CUI [1,2]
C0041618
Please specify date.
Description

date of major illness or surgery

Data type

date

Alias
UMLS CUI [1]
C3173359
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Similar models

Pre-existing Conditions Associated with Cancer Protocol PhenX Toolkit

1 forms
Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
PhenX - pre-existing cancer conditions protocol
C3169654 (UMLS CUI-1)
Item
Clinician-diagnosed illness [PhenX]
integer
C0011900 (UMLS CUI [1])
diagnosed illness
Code List
Clinician-diagnosed illness [PhenX]
CL Item
Myocardial infarction  (1)
C0027051 (UMLS CUI-1)
CL Item
Angina pectoris  (2)
C0002962 (UMLS CUI-1)
CL Item
Coronary bypass  (3)
C0010055 (UMLS CUI-1)
CL Item
Angioplasty or stent  (4)
C3843759 (UMLS CUI-1)
CL Item
Transient ischemic attack - TIA  (5)
C0007787 (UMLS CUI-1)
CL Item
Stroke (CVA) or TIA  (6)
C3844446 (UMLS CUI-1)
CL Item
Deep vein thrombosis (7)
C0149871 (UMLS CUI-1)
CL Item
Pulmonary embolism (8)
C0034065 (UMLS CUI-1)
CL Item
Melanoma  (9)
C0025202 (UMLS CUI-1)
CL Item
Basal cell skin cancer  (10)
C0751676 (UMLS CUI-1)
CL Item
Squamous cell (epidermoid) carcinoma  (11)
C3843745 (UMLS CUI-1)
CL Item
Fibrocystic or other benign breast disease (12)
C3843758 (UMLS CUI-1)
CL Item
Breast cancer  (13)
C0678222 (UMLS CUI-1)
CL Item
Other cancer  (14)
C1707251 (UMLS CUI-1)
CL Item
Colon or rectal polyp - benign (15)
C3843757 (UMLS CUI-1)
CL Item
Ulcerative colitis or Crohn’s  (16)
C3843756 (UMLS CUI-1)
CL Item
Gastric or duodenal ulcer  (17)
C3843755 (UMLS CUI-1)
CL Item
Barrett’s Esophagus  (18)
C0004763 (UMLS CUI-1)
CL Item
Gallstones  (19)
C0008350 (UMLS CUI-1)
CL Item
Cholecystectomy  (20)
C0008320 (UMLS CUI-1)
CL Item
Diabetes mellitus  (21)
C0011849 (UMLS CUI-1)
CL Item
Elevated cholesterol (22)
C0020443 (UMLS CUI-1)
CL Item
High blood pressure  (23)
C0020538 (UMLS CUI-1)
CL Item
Endometriosis - 1st diagnosis (24)
C3843754 (UMLS CUI-1)
CL Item
Uterine fibroids - 1st diagnosis  (25)
C3843753 (UMLS CUI-1)
CL Item
Premenstrual syndrome - PMS  (26)
C0033046 (UMLS CUI-1)
CL Item
Kidney stones  (27)
C0022650 (UMLS CUI-1)
CL Item
Multiple Sclerosis (28)
C0026769 (UMLS CUI-1)
CL Item
Asthma, doctor diagnosed  (29)
C3843752 (UMLS CUI-1)
CL Item
Emphysema or chronic bronchitis, doctor diagnosis (30)
C3843751 (UMLS CUI-1)
CL Item
Pneumonia, x-ray confirmed  (31)
C3843750 (UMLS CUI-1)
CL Item
Graves’ Disease - hyperthyroidism  (32)
C0018213 (UMLS CUI-1)
CL Item
Hypothyroidism  (33)
C0020676 (UMLS CUI-1)
CL Item
Thyroid nodule (benign) (34)
C0749467 (UMLS CUI-1)
CL Item
Gout  (35)
C0018099 (UMLS CUI-1)
CL Item
SLE (systemic lupus)  (36)
C3843749 (UMLS CUI-1)
CL Item
Rheumatoid arthritis, doctor diagnosis  (37)
C3843748 (UMLS CUI-1)
CL Item
Other arthritis  (38)
C0494904 (UMLS CUI-1)
CL Item
Depression, clinician diagnosis  (39)
C3843747 (UMLS CUI-1)
CL Item
Other major illness or surgery (40)
C3843746 (UMLS CUI-1)
pre-existing condition
Item
Have you had any of these clinician-diagnosed illnesses? Myocardial infarction (heart attack)?
boolean
C3173166 (UMLS CUI [1])
pre-existing condition year
Item
Year of Diagnosis, Myocardial infarction (heart attack)?
integer
C0521987 (UMLS CUI [1,1])
C0439234 (UMLS CUI [1,2])
angina pectoris by angiography
Item
Confirmed angiography?
boolean
C0002962 (UMLS CUI [1,1])
C0002971 (UMLS CUI [1,2])
fibrocystic by breast biopsy
Item
Confirmed by breast biopsy?
boolean
C0010674 (UMLS CUI [1,1])
C0405352 (UMLS CUI [1,2])
fibrocystic by aspiration
Item
Confirmed by aspiration?
boolean
C0010674 (UMLS CUI [1,1])
C0700198 (UMLS CUI [1,2])
site of other cancer
Item
Specify site of other cancer.
text
C0006826 (UMLS CUI [1,1])
C2945843 (UMLS CUI [1,2])
gallstones symptoms
Item
Did you have symptoms?
boolean
C0242216 (UMLS CUI [1,1])
C1457887 (UMLS CUI [1,2])
Item
How diagnosed?
integer
C0242216 (UMLS CUI [1,1])
C0011900 (UMLS CUI [1,2])
method gallstones diagnosed
Code List
How diagnosed?
CL Item
X-Ray or ultrasound  (1)
C3843744 (UMLS CUI-1)
CL Item
other (2)
C0205394 (UMLS CUI-1)
endometriosis by laparoscopy
Item
Confirmed by laparoscopy?
boolean
C0014175 (UMLS CUI [1,1])
C0031150 (UMLS CUI [1,2])
uterine fibroids by pelvic exam
Item
Confirmed by pelvic exam?
boolean
C0042133 (UMLS CUI [1,1])
C0747330 (UMLS CUI [1,2])
uterine fibroids by ultrasound
Item
Confirmed by ultrasound/hysterectomy?
boolean
C0042133 (UMLS CUI [1,1])
C0041618 (UMLS CUI [1,2])
date of major illness or surgery
Item
Please specify date.
date
C3173359 (UMLS CUI [1])
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