ID

46174

Description

Principal Investigator: Huiying Li, PhD, David Geffen School of Medicine, University of California, Los Angeles, CA, USA MeSH: Acne Vulgaris https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000263 Acne vulgaris affects 17 million Americans, more than 80% of the people of age 12-24. The goal of this study is to investigate the relationship between acne pathogenesis and the skin microbiota residing in the microcomedones. This study will enroll approximately 100 healthy individuals and acne patients, both male and female with age 13 or older. Data obtained from this study will help better understand the disease pathogenesis and may lead to the development of new effective therapeutic strategies for treatment of acne.

Link

dbGaP study=phs000263

Keywords

  1. 6/7/22 6/7/22 - Dr. Christian Niklas
  2. 10/12/22 10/12/22 - Adrian Schulz
  3. 1/29/25 1/29/25 - Akane Nishihara
Copyright Holder

Huiying Li, PhD

Uploaded on

January 29, 2025

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000263 Metagenomic Study of the Human Skin Microbiome Associated with Acne

The phenotype of samples in association with subject's age, case or control status, acne lesion, acne treatment, and cosmetic procedures.

pht001234
Description

pht001234

De-identified subject's ID
Description

SUBJID

Data type

text

Alias
UMLS CUI [1,1]
C2348585
UMLS CUI [1,2]
C2346787
De-identified sample's ID
Description

SAMPID

Data type

string

Alias
UMLS CUI [1,1]
C1299222
UMLS CUI [1,2]
C2346787
Age of subject
Description

age

Data type

text

Measurement units
  • Years
Alias
UMLS CUI [1,1]
C0001779
Years
Case or control?
Description

case_control

Data type

text

Alias
UMLS CUI [1,1]
C2348568
Severity of acne on face (0=normal, 5= severe)
Description

face

Data type

text

Alias
UMLS CUI [1,1]
C1319166
UMLS CUI [1,2]
C0702166
UMLS CUI [1,3]
C0015450
Severity of acne on nose (0=normal, 5= severe)
Description

nose

Data type

text

Alias
UMLS CUI [1,1]
C1319166
UMLS CUI [1,2]
C0702166
UMLS CUI [1,3]
C0028429
Was the subject undergoing any prescription treatment for acne at the time of sampling?
Description

Currently Treated?

Data type

string

Alias
UMLS CUI [1,1]
C0087111
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C0870078
Which prescription treatment for acne was the subject undergoing at the time of sampling?
Description

Current Treatment

Data type

string

Alias
UMLS CUI [1,1]
C0087111
Had the subject previous undergone prescription treatment for acne?
Description

Previously Treated?

Data type

string

Alias
UMLS CUI [1,1]
C0087111
UMLS CUI [1,2]
C0205156
Which prescription treatment for acne had the subject previously undergone?
Description

Previous Treatment

Data type

string

Alias
UMLS CUI [1,1]
C0087111
UMLS CUI [1,2]
C0205156
Days since first day of last menstrual cycle, at the time of sampling
Description

Days since LMP

Data type

text

Measurement units
  • Days
Alias
UMLS CUI [1,1]
C0425932
Days
Was the subject taking any medications affecting hormonal regulation at the time of sampling?
Description

Hormonal Regulation

Data type

string

Alias
UMLS CUI [1,1]
C0087111
UMLS CUI [1,2]
C0279025
Any cosmetic procedures or treatments on the face undergone by the subject?
Description

Cosmetic procedures

Data type

string

Alias
UMLS CUI [1,1]
C0010164
UMLS CUI [1,2]
C0360289
UMLS CUI [1,3]
C0442965

Similar models

The phenotype of samples in association with subject's age, case or control status, acne lesion, acne treatment, and cosmetic procedures.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht001234
SUBJID
Item
De-identified subject's ID
text
C2348585 (UMLS CUI [1,1])
C2346787 (UMLS CUI [1,2])
SAMPID
Item
De-identified sample's ID
string
C1299222 (UMLS CUI [1,1])
C2346787 (UMLS CUI [1,2])
age
Item
Age of subject
text
C0001779 (UMLS CUI [1,1])
Item
Case or control?
text
C2348568 (UMLS CUI [1,1])
Code List
Case or control?
CL Item
Control (1)
C0009932 (UMLS CUI [1,1])
CL Item
Case (2)
C1698493 (UMLS CUI [1,1])
face
Item
Severity of acne on face (0=normal, 5= severe)
text
C1319166 (UMLS CUI [1,1])
C0702166 (UMLS CUI [1,2])
C0015450 (UMLS CUI [1,3])
nose
Item
Severity of acne on nose (0=normal, 5= severe)
text
C1319166 (UMLS CUI [1,1])
C0702166 (UMLS CUI [1,2])
C0028429 (UMLS CUI [1,3])
Currently Treated?
Item
Was the subject undergoing any prescription treatment for acne at the time of sampling?
string
C0087111 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0870078 (UMLS CUI [1,3])
Current Treatment
Item
Which prescription treatment for acne was the subject undergoing at the time of sampling?
string
C0087111 (UMLS CUI [1,1])
Previously Treated?
Item
Had the subject previous undergone prescription treatment for acne?
string
C0087111 (UMLS CUI [1,1])
C0205156 (UMLS CUI [1,2])
Previous Treatment
Item
Which prescription treatment for acne had the subject previously undergone?
string
C0087111 (UMLS CUI [1,1])
C0205156 (UMLS CUI [1,2])
Days since LMP
Item
Days since first day of last menstrual cycle, at the time of sampling
text
C0425932 (UMLS CUI [1,1])
Hormonal Regulation
Item
Was the subject taking any medications affecting hormonal regulation at the time of sampling?
string
C0087111 (UMLS CUI [1,1])
C0279025 (UMLS CUI [1,2])
Cosmetic procedures
Item
Any cosmetic procedures or treatments on the face undergone by the subject?
string
C0010164 (UMLS CUI [1,1])
C0360289 (UMLS CUI [1,2])
C0442965 (UMLS CUI [1,3])

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