ID

46132

Description

Principal Investigator: Edwin K. Silverman, Brigham and Women's Hospital Boston, MA USA MeSH: Chronic Obstructive Pulmonary Disease,Emphysema https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000946 Chronic obstructive pulmonary disease (COPD) is the third leading cause of death in the United States and the only leading cause of death that is steadily increasing in frequency. This project collected a set of extended pedigrees ascertained through subjects with severe, early-onset COPD. This study has enrolled subjects with severe COPD (forced expiratory volume in one second (FEV1) 40% predicted) at an early age ( 53 years) without alpha-1 antitrypsin deficiency (a known Mendelian risk factor for COPD). Extended pedigrees are enrolled, primarily in New England, although some more geographically distant subjects have been included. This study has been used for epidemiological studies, familial aggregation analysis, linkage analysis, and candidate gene association analysis. Approximately 80 of the severe, early-onset COPD probands will undergo whole genome sequencing in this project with sequencing data available through dbGaP.

Lien

dbGaP study id = phs000946

Mots-clés

  1. 27/11/2024 27/11/2024 - Dr. Christian Niklas
Détendeur de droits

Edwin K. Silverman, Brigham and Women's Hospital Boston, MA USA

Téléchargé le

27 novembre 2024

DOI

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Licence

Creative Commons BY 4.0

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dbGaP phs000946 NHLBI TOPMed: Boston Early-Onset COPD Study

This subject phenotypes data table includes case control status of the subject for severe, early-onset COPD, gender, race, age (n=2 variables; age at visit and age at sample collection), smoking status (n=5 variables; current and former smoking status, number of cigarettes smoked per day, number of cigarettes smoked per day averaged over all years smoking, packs of cigarettes smoked per day multiplied by years of smoking), pregnancy status, and anthropometric factors (n=3 variables; weight, height, and BMI).

pht005719
Description

pht005719

De-identified subject ID
Description

SUBJECT_ID

Type de données

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Gender of participant [Male, Female]
Description

Collected in Exam 1

Type de données

string

Alias
UMLS CUI [1,1]
C0079399
Race of participant
Description

Collected in Exam 1

Type de données

text

Alias
UMLS CUI [1,1]
C0034510
Subject age
Description

Collected in Exam 1

Type de données

float

Unités de mesure
  • Years
Alias
UMLS CUI [1,1]
C0001779
Years
Subject age at sample collection
Description

Collected in Exam 1

Type de données

float

Unités de mesure
  • Years
Alias
UMLS CUI [1,1]
C0001779
UMLS CUI [1,2]
C0200345
Years
Former smoking status
Description

Collected in Exam 1

Type de données

text

Alias
UMLS CUI [1,1]
C1519384
Current smoking status
Description

Collected in Exam 1

Type de données

text

Alias
UMLS CUI [1,1]
C1519386
Number of cigarettes smoked per day
Description

Collected in Exam 1

Type de données

float

Unités de mesure
  • Cigarettes per day
Alias
UMLS CUI [1,1]
C3694146
Cigarettes per day
Number of cigarettes smoked per day, averaged over all years of smoking
Description

Collected in Exam 1

Type de données

text

Unités de mesure
  • Cigarettes per day
Alias
UMLS CUI [1,1]
C3694146
UMLS CUI [1,2]
C1510992
Cigarettes per day
Packs of cigarettes smoked per day multiplied by years of cigarette smoking, calculated at specified visit
Description

Collected in Exam 1

Type de données

float

Unités de mesure
  • Packs of cigarettes per day
Alias
UMLS CUI [1,1]
C1303175
Packs of cigarettes per day
Pregnant
Description

Collected in Exam 1

Type de données

text

Alias
UMLS CUI [1,1]
C0032961
Weight in kg
Description

Collected in Exam 1

Type de données

float

Unités de mesure
  • kg
Alias
UMLS CUI [1,1]
C0005910
kg
Height in cm
Description

Collected in Exam 1

Type de données

float

Unités de mesure
  • cm
Alias
UMLS CUI [1,1]
C0005890
cm
Body Mass Index [BMI ]
Description

Collected in Exam 1

Type de données

float

Alias
UMLS CUI [1,1]
C1305855
Case control status of the subject for severe, early-onset COPD
Description

Collected in Exam 1

Type de données

text

Alias
UMLS CUI [1,1]
C3274646

Similar models

This subject phenotypes data table includes case control status of the subject for severe, early-onset COPD, gender, race, age (n=2 variables; age at visit and age at sample collection), smoking status (n=5 variables; current and former smoking status, number of cigarettes smoked per day, number of cigarettes smoked per day averaged over all years smoking, packs of cigarettes smoked per day multiplied by years of smoking), pregnancy status, and anthropometric factors (n=3 variables; weight, height, and BMI).

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht005719
SUBJECT_ID
Item
De-identified subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
GENDER
Item
Gender of participant [Male, Female]
string
C0079399 (UMLS CUI [1,1])
Item
Race of participant
text
C0034510 (UMLS CUI [1,1])
Code List
Race of participant
CL Item
Other (O)
CL Item
Caucasian (C)
VISIT_AGE
Item
Subject age
float
C0001779 (UMLS CUI [1,1])
DNA_AGE
Item
Subject age at sample collection
float
C0001779 (UMLS CUI [1,1])
C0200345 (UMLS CUI [1,2])
Item
Former smoking status
text
C1519384 (UMLS CUI [1,1])
Code List
Former smoking status
CL Item
Yes (1)
CL Item
No (0)
Item
Current smoking status
text
C1519386 (UMLS CUI [1,1])
Code List
Current smoking status
CL Item
Yes (1)
CL Item
No (0)
CIGSPERDAY
Item
Number of cigarettes smoked per day
float
C3694146 (UMLS CUI [1,1])
CIGSPERDAY_AVERAGE
Item
Number of cigarettes smoked per day, averaged over all years of smoking
text
C3694146 (UMLS CUI [1,1])
C1510992 (UMLS CUI [1,2])
PACKYEARS
Item
Packs of cigarettes smoked per day multiplied by years of cigarette smoking, calculated at specified visit
float
C1303175 (UMLS CUI [1,1])
Item
Pregnant
text
C0032961 (UMLS CUI [1,1])
Code List
Pregnant
CL Item
Yes (1)
CL Item
No (0)
WEIGHT
Item
Weight in kg
float
C0005910 (UMLS CUI [1,1])
HEIGHT
Item
Height in cm
float
C0005890 (UMLS CUI [1,1])
BMI
Item
Body Mass Index [BMI ]
float
C1305855 (UMLS CUI [1,1])
Item
Case control status of the subject for severe, early-onset COPD
text
C3274646 (UMLS CUI [1,1])
Code List
Case control status of the subject for severe, early-onset COPD
CL Item
Control (1)
C3274648 (UMLS CUI [1,1])
CL Item
Case (2)
C3274647 (UMLS CUI [1,1])

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