ID

46132

Descrição

Principal Investigator: Edwin K. Silverman, Brigham and Women's Hospital Boston, MA USA MeSH: Chronic Obstructive Pulmonary Disease,Emphysema https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000946 Chronic obstructive pulmonary disease (COPD) is the third leading cause of death in the United States and the only leading cause of death that is steadily increasing in frequency. This project collected a set of extended pedigrees ascertained through subjects with severe, early-onset COPD. This study has enrolled subjects with severe COPD (forced expiratory volume in one second (FEV1) 40% predicted) at an early age ( 53 years) without alpha-1 antitrypsin deficiency (a known Mendelian risk factor for COPD). Extended pedigrees are enrolled, primarily in New England, although some more geographically distant subjects have been included. This study has been used for epidemiological studies, familial aggregation analysis, linkage analysis, and candidate gene association analysis. Approximately 80 of the severe, early-onset COPD probands will undergo whole genome sequencing in this project with sequencing data available through dbGaP.

Link

dbGaP study id = phs000946

Palavras-chave

  1. 27/11/2024 27/11/2024 - Dr. Christian Niklas
Titular dos direitos

Edwin K. Silverman, Brigham and Women's Hospital Boston, MA USA

Transferido a

27 de novembro de 2024

DOI

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Licença

Creative Commons BY 4.0

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dbGaP phs000946 NHLBI TOPMed: Boston Early-Onset COPD Study

This sample attributes table includes body site where sample was collected, analyte type, tumor status, sequencing center, funding source, TOPMed phase, project, and study name.

pht004974
Descrição

pht004974

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Descrição

SAMPLE_ID

Tipo de dados

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Descrição

BODY_SITE

Tipo de dados

string

Alias
UMLS CUI [1,1]
C0449705
Analyte type
Descrição

ANALYTE_TYPE

Tipo de dados

string

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Descrição

IS_TUMOR

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0475752
Name of the center which conducted sequencing
Descrição

SEQUENCING_CENTER

Tipo de dados

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C0565990
UMLS CUI [1,3]
C1561491
Funding source
Descrição

Funding_Source

Tipo de dados

string

Alias
UMLS CUI [1,1]
C0243098
UMLS CUI [1,2]
C0449416
TOP Med phase
Descrição

TOPMed_Phase

Tipo de dados

text

Alias
UMLS CUI [1,1]
C0205390
UMLS CUI [1,2]
C2603343
TOP Med project
Descrição

TOPMed_Project

Tipo de dados

string

Alias
UMLS CUI [1,1]
C0700032
Study name
Descrição

Study_Name

Tipo de dados

string

Alias
UMLS CUI [1,1]
C0008976
UMLS CUI [1,2]
C0027365

Similar models

This sample attributes table includes body site where sample was collected, analyte type, tumor status, sequencing center, funding source, TOPMed phase, project, and study name.

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de dados
Alias
Item Group
pht004974
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
string
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte type
string
C4744818 (UMLS CUI [1,1])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
Code List
Tumor status
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is tumor (Y)
C0027651 (UMLS CUI [1,1])
SEQUENCING_CENTER
Item
Name of the center which conducted sequencing
string
C1301943 (UMLS CUI [1,1])
C0565990 (UMLS CUI [1,2])
C1561491 (UMLS CUI [1,3])
Funding_Source
Item
Funding source
string
C0243098 (UMLS CUI [1,1])
C0449416 (UMLS CUI [1,2])
TOPMed_Phase
Item
TOP Med phase
text
C0205390 (UMLS CUI [1,1])
C2603343 (UMLS CUI [1,2])
TOPMed_Project
Item
TOP Med project
string
C0700032 (UMLS CUI [1,1])
Study_Name
Item
Study name
string
C0008976 (UMLS CUI [1,1])
C0027365 (UMLS CUI [1,2])

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