ID

45992

Description

Principal Investigator: Elad Ziv, MD, University of California, San Francisco, USA MeSH: Breast Neoplasms,Receptors, Estrogen,Receptors, Progesterone https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000912 The genome-wide association study (GWAS) includes participants enrolled into two different studies. The first study, the San Francisco Bay Area Cancer Study (SFBCS) is a population-based case-control study of breast cancer conducted in the San Francisco Bay Area and included women ages 35-79 years from three racial/ethnic groups: Non-Hispanic whites, African Americans, and Hispanics/Latinas. For the GWAS, only Hispanic/Latina women were included. Women diagnosed with invasive breast cancer between 1995 and 2002 were identified through the Greater Bay Area Cancer Registry. Controls were identified by random digit dialing and were frequency-matched to cases by age in 5 year increments and by race/ethnicity. Hispanic/Latina ethnicity was assessed by self-report. 175 Hispanic/Latina cases and 307 Hispanic/Latina controls from the SFBCS had given adequate consent and provided biospecimens that were used in the GWAS to be included in this data submission. The second study is the Northern California site of the Breast Cancer Family Registry (NC-BCFR). This population-based family study recruited breast cancer cases ages 18-64 years diagnosed from 1995-2009 that were identified through the Greater Bay Area Cancer Registry. Cases included all women at increased genetic susceptibility for breast cancer who met one or more of the following criteria: (a) being diagnosed with breast cancer at age 35 years; b) having a personal history of ovarian cancer or childhood cancer; (c) being diagnosed with two different breast cancers (bilateral breast cancers), with the first one diagnosed at age 50 years; and d) having one or more first-degree relatives with breast cancer, ovarian cancer or childhood cancer. Cases not meeting these criteria were randomly sampled and racial/ethnic minorities were oversampled. Controls were recruited by random digit dialing and were matched by 5-year age increments and by race/ethnicity. For the current GWAS only Latina/Hispanic cases and controls were included. Latina/Hispanic ethnicity was assessed by self-report. 631 Hispanic/Latina cases and 61 Hispanic/Latina controls from the NC-BCFR had given adequate consent and provided biospecimens that were used in the GWAS to be included in this data submission.

Link

dbGaP study=phs000912

Keywords

  1. 4/11/24 4/11/24 - Madita Rudolph
Copyright Holder

Elad Ziv, MD, University of California, San Francisco, USA

Uploaded on

April 11, 2024

DOI

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License

Creative Commons BY 4.0

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dbGaP phs000912 San Francisco Bay Area Latina Breast Cancer Study

Eligibility Criteria

Inclusion and exclusion criteria
Description

Inclusion and exclusion criteria

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0680251
Inclusion Criteria: Cases: San Francisco Bay Area Cancer Study: Women who are of self-reported Latina/Hispanic ethnicity with invasive breast cancer who lived in the 5 Bay Area Counties (San Francisco, San Mateo, Alameda, Santa Clara, Marin) ages 35-79. Cases were identified through the San Francisco Bay Area Cancer Registry
Description

Elig.phs000912.v1.p1.1

Data type

boolean

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0043210
UMLS CUI [1,4]
C0853879
UMLS CUI [1,5]
C0015031
UMLS CUI [1,6]
C0086409
UMLS CUI [1,7]
C0949335
UMLS CUI [1,8]
C0237096
UMLS CUI [1,9]
C0001779
Northern California Breast Cancer Family Registry: Women who are of self-reported Latina/Hispanic ethnicity who lived in the 5 Bay Area Counties (San Francisco, San Mateo, Alameda, Santa Clara, Marin) diagnosed with invasive breast cancer and had at least one of the following criteria: family history of at least one first degree relative with breast cancer, personal diagnosis of breast cancer at age 35 or younger, personal diagnosis of bilateral breast cancer. Cases were identified through the San Francisco Bay Area Cancer Registry
Description

Elig.phs000912.v1.p1.2

Data type

boolean

Alias
UMLS CUI [1,1]
C3669174
Exclusion Criteria: Cases were excluded if their physician reported that they had a contraindication to participation in a research study, if they could not complete the informed consent or the questionnaire in English or Spanish Northern California Breast Cancer Family Registry:
Description

Elig.phs000912.v1.p1.3

Data type

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C1706256
UMLS CUI [1,3]
C0522473
UMLS CUI [1,4]
C2348568
UMLS CUI [1,5]
C0021430
UMLS CUI [1,6]
C1299582
Controls: Controls were excluded if their physician reported that they had a contraindication to participation in a research study, if they could not complete the informed consent or the questionnaire in English or Spanish
Description

Elig.phs000912.v1.p1.4

Data type

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C0522473
UMLS CUI [1,4]
C2348568
UMLS CUI [1,5]
C0021430
UMLS CUI [1,6]
C1299582

Similar models

Eligibility Criteria

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
Inclusion and exclusion criteria
C1512693 (UMLS CUI [1,1])
C0680251 (UMLS CUI [1,2])
Elig.phs000912.v1.p1.1
Item
Inclusion Criteria: Cases: San Francisco Bay Area Cancer Study: Women who are of self-reported Latina/Hispanic ethnicity with invasive breast cancer who lived in the 5 Bay Area Counties (San Francisco, San Mateo, Alameda, Santa Clara, Marin) ages 35-79. Cases were identified through the San Francisco Bay Area Cancer Registry
boolean
C1512693 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0043210 (UMLS CUI [1,3])
C0853879 (UMLS CUI [1,4])
C0015031 (UMLS CUI [1,5])
C0086409 (UMLS CUI [1,6])
C0949335 (UMLS CUI [1,7])
C0237096 (UMLS CUI [1,8])
C0001779 (UMLS CUI [1,9])
Elig.phs000912.v1.p1.2
Item
Northern California Breast Cancer Family Registry: Women who are of self-reported Latina/Hispanic ethnicity who lived in the 5 Bay Area Counties (San Francisco, San Mateo, Alameda, Santa Clara, Marin) diagnosed with invasive breast cancer and had at least one of the following criteria: family history of at least one first degree relative with breast cancer, personal diagnosis of breast cancer at age 35 or younger, personal diagnosis of bilateral breast cancer. Cases were identified through the San Francisco Bay Area Cancer Registry
boolean
C3669174 (UMLS CUI [1,1])
Elig.phs000912.v1.p1.3
Item
Exclusion Criteria: Cases were excluded if their physician reported that they had a contraindication to participation in a research study, if they could not complete the informed consent or the questionnaire in English or Spanish Northern California Breast Cancer Family Registry:
boolean
C0680251 (UMLS CUI [1,1])
C1706256 (UMLS CUI [1,2])
C0522473 (UMLS CUI [1,3])
C2348568 (UMLS CUI [1,4])
C0021430 (UMLS CUI [1,5])
C1299582 (UMLS CUI [1,6])
Elig.phs000912.v1.p1.4
Item
Controls: Controls were excluded if their physician reported that they had a contraindication to participation in a research study, if they could not complete the informed consent or the questionnaire in English or Spanish
boolean
C0680251 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C0522473 (UMLS CUI [1,3])
C2348568 (UMLS CUI [1,4])
C0021430 (UMLS CUI [1,5])
C1299582 (UMLS CUI [1,6])

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