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ID

45877

Description

Principal Investigator: Steven A. Rosenberg, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA MeSH: Colonic Neoplasms,Ovarian Neoplasms,Stomach Neoplasms,Cholangiocarcinoma,Pancreatic Neoplasms,Rectal Neoplasms,Esophageal Neoplasms,Colorectal Neoplasms,Endometrial Neoplasms,Paraneoplastic Syndromes, Ocular https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001003 Recent advances and insights into the molecular pathogenesis of cancer have led to the development of novel molecular and biologic targeted therapies for the treatment of advanced cancer patients. A critical challenge in extending these studies involves the identification and validation of new therapeutic targets for future cancer therapies. In this study, we performed whole exome and RNA-Seq analysis metastases to determine the nature and frequency of somatic mutations.

Link

dbGaP study = phs001003

Keywords

  1. 11/6/23 11/6/23 - Simon Heim
Copyright Holder

Steven A. Rosenberg, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA

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November 6, 2023

DOI

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License

Creative Commons BY 4.0

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    dbGaP phs001003 Prospective Procurement of Solid Tumor Tissue to Identify Novel Therapeutic Targets

    Eligibility Criteria

    Inclusion and exclusion criteria
    Description

    Inclusion and exclusion criteria

    Alias
    UMLS CUI [1,1]
    C1512693
    UMLS CUI [1,2]
    C0680251
    *Inclusion Criteria*<br> <ul style="list-style-type:disc">
    Description

    *Inclusion Criteria*

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C1512693
    Patients must be greater than or equal to 16 years of age.
    Description

    Patients must be greater than or equal to 16 years of age.

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0001779
    UMLS CUI [1,2]
    C0439091
    Patients who have a premalignant, primary or metastatic solid tumors based upon either radiographic or biochemical testing, or histological/cytological analysis that requires surgery or biopsy as a part of the standard of care diagnosis, treatment and/or follow up.
    Description

    Patients who have a premalignant, primary or metastatic solid tumors based upon either radiographic or biochemical testing, or histological/cytological analysis that requires surgery or biopsy as a part of the standard of care diagnosis, treatment and/or follow up.

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C1514391
    UMLS CUI [1,2]
    C0280100
    UMLS CUI [1,3]
    C0677930
    UMLS CUI [1,4]
    C0027627
    UMLS CUI [1,5]
    C0183882
    UMLS CUI [1,6]
    C0430027
    UMLS CUI [1,7]
    C1522593
    UMLS CUI [1,8]
    C0543467
    UMLS CUI [1,9]
    C0005558
    UMLS CUI [1,10]
    C2936643
    UMLS CUI [1,11]
    C1522577
    Patients must have laboratory and physical examination parameters within acceptable limits by standard of practice guidelines prior to biopsy or surgery.
    Description

    Patients must have laboratory and physical examination parameters within acceptable limits by standard of practice guidelines prior to biopsy or surgery.

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0260877
    UMLS CUI [1,2]
    C0031809
    UMLS CUI [1,3]
    C5445108
    UMLS CUI [1,4]
    C4047968
    UMLS CUI [1,5]
    C3244099
    UMLS CUI [1,6]
    C0162791
    UMLS CUI [1,7]
    C0332152
    UMLS CUI [1,8]
    C0005558
    UMLS CUI [1,9]
    C0543467
    Patients must be planning to undergo surgery or biopsy as part of their treatment plan. <br> Note: Patients will not be enrolled exclusively for the procurement of tissue samples.
    Description

    Patients must be planning to undergo surgery or biopsy as part of their treatment plan. <br> Note: Patients will not be enrolled exclusively for the procurement of tissue samples.

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C2081627
    UMLS CUI [1,2]
    C0580737
    Patients who agree to undergo leukapheresis must meet the following criteria: <ul style="list-style-type:circle">
    Description

    Patients who agree to undergo leukapheresis must meet the following criteria:

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C1511481
    UMLS CUI [1,2]
    C0023416
    UMLS CUI [1,3]
    C1512693
    Seronegative for HIV
    Description

    Seronegative for HIV

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0019682
    UMLS CUI [1,2]
    C0521144
    Seronegative for hepatitis B surface antigen and seronegative for antibody to hepatitis C.
    Description

    Seronegative for hepatitis B surface antigen and seronegative for antibody to hepatitis C.

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0919711
    UMLS CUI [1,2]
    C0853904
    CBC within normal limits
    Description

    CBC within normal limits

    Data type

    boolean

    Alias
    UMLS CUI [1,1]
    C0009555
    UMLS CUI [1,2]
    C0442816

    Similar models

    Eligibility Criteria

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    Inclusion and exclusion criteria
    C1512693 (UMLS CUI [1,1])
    C0680251 (UMLS CUI [1,2])
    *Inclusion Criteria*
    Item
    *Inclusion Criteria*<br> <ul style="list-style-type:disc">
    boolean
    C1512693 (UMLS CUI [1,1])
    Patients must be greater than or equal to 16 years of age.
    Item
    Patients must be greater than or equal to 16 years of age.
    boolean
    C0001779 (UMLS CUI [1,1])
    C0439091 (UMLS CUI [1,2])
    Patients who have a premalignant, primary or metastatic solid tumors based upon either radiographic or biochemical testing, or histological/cytological analysis that requires surgery or biopsy as a part of the standard of care diagnosis, treatment and/or follow up.
    Item
    Patients who have a premalignant, primary or metastatic solid tumors based upon either radiographic or biochemical testing, or histological/cytological analysis that requires surgery or biopsy as a part of the standard of care diagnosis, treatment and/or follow up.
    boolean
    C1514391 (UMLS CUI [1,1])
    C0280100 (UMLS CUI [1,2])
    C0677930 (UMLS CUI [1,3])
    C0027627 (UMLS CUI [1,4])
    C0183882 (UMLS CUI [1,5])
    C0430027 (UMLS CUI [1,6])
    C1522593 (UMLS CUI [1,7])
    C0543467 (UMLS CUI [1,8])
    C0005558 (UMLS CUI [1,9])
    C2936643 (UMLS CUI [1,10])
    C1522577 (UMLS CUI [1,11])
    Patients must have laboratory and physical examination parameters within acceptable limits by standard of practice guidelines prior to biopsy or surgery.
    Item
    Patients must have laboratory and physical examination parameters within acceptable limits by standard of practice guidelines prior to biopsy or surgery.
    boolean
    C0260877 (UMLS CUI [1,1])
    C0031809 (UMLS CUI [1,2])
    C5445108 (UMLS CUI [1,3])
    C4047968 (UMLS CUI [1,4])
    C3244099 (UMLS CUI [1,5])
    C0162791 (UMLS CUI [1,6])
    C0332152 (UMLS CUI [1,7])
    C0005558 (UMLS CUI [1,8])
    C0543467 (UMLS CUI [1,9])
    Patients must be planning to undergo surgery or biopsy as part of their treatment plan. <br> Note: Patients will not be enrolled exclusively for the procurement of tissue samples.
    Item
    Patients must be planning to undergo surgery or biopsy as part of their treatment plan. <br> Note: Patients will not be enrolled exclusively for the procurement of tissue samples.
    boolean
    C2081627 (UMLS CUI [1,1])
    C0580737 (UMLS CUI [1,2])
    Patients who agree to undergo leukapheresis must meet the following criteria:
    Item
    Patients who agree to undergo leukapheresis must meet the following criteria: <ul style="list-style-type:circle">
    boolean
    C1511481 (UMLS CUI [1,1])
    C0023416 (UMLS CUI [1,2])
    C1512693 (UMLS CUI [1,3])
    Seronegative for HIV
    Item
    Seronegative for HIV
    boolean
    C0019682 (UMLS CUI [1,1])
    C0521144 (UMLS CUI [1,2])
    Seronegative for hepatitis B surface antigen and seronegative for antibody to hepatitis C.
    Item
    Seronegative for hepatitis B surface antigen and seronegative for antibody to hepatitis C.
    boolean
    C0919711 (UMLS CUI [1,1])
    C0853904 (UMLS CUI [1,2])
    CBC within normal limits
    Item
    CBC within normal limits
    boolean
    C0009555 (UMLS CUI [1,1])
    C0442816 (UMLS CUI [1,2])

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