ID

45866

Descripción

Principal Investigator: Richard Wilson, McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA MeSH: https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001005 This study of three metastatic melanoma patients utilized exome sequencing and RNA sequencing to help identify putative neoantigen peptides that could be further validated by standard immunological assays before design of a personalized vaccine. For each set of neoantigens identified and verified by standard assays, we designed GMP peptides that correspond to the top neoantigens, then used these to condition dendritic cell isolates from each patient. The conditioned dendritic cells were used as the vaccine in three rounds of vaccination, followed by monitoring for T cell memory response to each of the neoantigens.

Link

dbGaP study = phs001005

Palabras clave

  1. 14/10/23 14/10/23 - Simon Heim
Titular de derechos de autor

Richard Wilson, McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA

Subido en

14 de octubre de 2023

DOI

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Licencia

Creative Commons BY 4.0

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dbGaP phs001005 Antigen Discovery in Melanoma

Subject ID, consent group, and affection status of participants with melanoma and involved in the "Identification of Putative Neoantigens in Stage III Melanoma" project.

pht005038
Descripción

pht005038

Alias
UMLS CUI [1,1]
C3846158
De-identified subject ID
Descripción

De-identified subject ID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Allowable research use
Descripción

Allowable research use

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0042153
UMLS CUI [1,2]
C0035168
UMLS CUI [1,3]
C0556660
Has subject been diagnosed with melanoma [Yes=subjects with melanoma; No=Subjects without melanoma]
Descripción

Has subject been diagnosed with melanoma [Yes=subjects with melanoma; No=Subjects without melanoma]

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0025202
UMLS CUI [1,2]
C0011900

Similar models

Subject ID, consent group, and affection status of participants with melanoma and involved in the "Identification of Putative Neoantigens in Stage III Melanoma" project.

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht005038
C3846158 (UMLS CUI [1,1])
De-identified subject ID
Item
De-identified subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Allowable research use
text
C0042153 (UMLS CUI [1,1])
C0035168 (UMLS CUI [1,2])
C0556660 (UMLS CUI [1,3])
Code List
Allowable research use
CL Item
Disease-Specific (Melanoma and Skin Cancer Research) (DS-MSC) (1)
Item
Has subject been diagnosed with melanoma [Yes=subjects with melanoma; No=Subjects without melanoma]
text
C0025202 (UMLS CUI [1,1])
C0011900 (UMLS CUI [1,2])
Code List
Has subject been diagnosed with melanoma [Yes=subjects with melanoma; No=Subjects without melanoma]
CL Item
Yes (1)
CL Item
No (2)

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