ID

45865

Beskrivning

Principal Investigator: Boaz P. Levi, PhD, Allen Institute for Brain Science, Seattle, WA, USA MeSH: Neuroglia,Growth and Development https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001016 The human neocortex is created from diverse intermixed progenitors in the prenatal germinal zones. These progenitors have been difficult to characterize since progenitors - particularly radial glia (RG) - are rare, and are defined by a combination of intracellular markers, position and morphology. To circumvent these problems we developed a method called FRISCR (Fixed and Recovered Intact Single Cell RNA) for transcriptome profiling of individual fixed, stained and sorted cells. We developed and validated FRISCR on human embryonic stem cells. We then profiled primary human RG (96 - 132 days post conception) that constitute only 1% of the mid-gestation cortex. These RG could be classified into ventricular zone-enriched RG (vRG) that express ANXA1 and CRYAB, and outer subventricular zone-localized RG (oRG) that express HOPX. Our study identifies the first markers and molecular profiles of vRG and oRG cells, and provides an essential step for understanding molecular networks driving the lineage of human neocortical progenitors. *Reprinted from Thomsen et. al. Nature Methods (2015), with permission from Nature Publishing.* Human embryonic stem cell data may be obtained through NCBI's GEO database, using accession number GSE71858. Raw data from one human sample that was not consented to be released to dbGaP may be obtained directly from the authors of Thomsen et. al., 2015.

Länk

dbGaP study = phs001016

Nyckelord

  1. 2023-10-14 2023-10-14 - Simon Heim
Rättsinnehavare

Boaz P. Levi, PhD, Allen Institute for Brain Science, Seattle, WA, USA

Uppladdad den

14 oktober 2023

DOI

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Licens

Creative Commons BY 4.0

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dbGaP phs001016 Fixed Single Cell Study (Radial Glia Cells)

Eligibility Criteria

Inclusion and exclusion criteria
Beskrivning

Inclusion and exclusion criteria

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0680251
Human fetal cortical cells were profiled in this study that were obtained from electively terminated pregnancies where the fetus showed no sign of neurological abnormality.
Beskrivning

Human fetal cortical cells were profiled in this study that were obtained from electively terminated pregnancies where the fetus showed no sign of neurological abnormality.

Datatyp

boolean

Alias
UMLS CUI [1,1]
C5670966
UMLS CUI [1,2]
C2003903
UMLS CUI [1,3]
C0269439
UMLS CUI [1,4]
C0015965
UMLS CUI [1,5]
C4035395
UMLS CUI [1,6]
C0497552

Similar models

Eligibility Criteria

Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
Inclusion and exclusion criteria
C1512693 (UMLS CUI [1,1])
C0680251 (UMLS CUI [1,2])
Human fetal cortical cells were profiled in this study that were obtained from electively terminated pregnancies where the fetus showed no sign of neurological abnormality.
Item
Human fetal cortical cells were profiled in this study that were obtained from electively terminated pregnancies where the fetus showed no sign of neurological abnormality.
boolean
C5670966 (UMLS CUI [1,1])
C2003903 (UMLS CUI [1,2])
C0269439 (UMLS CUI [1,3])
C0015965 (UMLS CUI [1,4])
C4035395 (UMLS CUI [1,5])
C0497552 (UMLS CUI [1,6])

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