0 Ratings

ID

45860

Description

Principal Investigator: Richard K. Wilson, PhD, The Genome Institute, Washington University School of Medicine, St. Louis, MO, USA MeSH: Breast Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001017 Genetic factors account for a large fraction of breast cancer risk and it is estimated that up to 30% of breast cancers have a heritable component. Inherited cancer susceptibility is associated with early-onset of malignancies in general. Although 20% of young women with breast cancer have germline mutations in the best understood breast cancer susceptibility genes, BRCA1, BRCA2 and TP53, in the remaining 80% of women with early-onset breast cancer, the genetic factors contributing to disease remain unexplained. By studying the extreme phenotype of women diagnosed at an early age there is enrichment for genetic factors that contribute to breast cancer. This study contains the whole exome sequence of 384 women diagnosed with invasive breast cancer prior to 40 years of age. Each of the subjects reported a family history of breast cancer and lacked mutations in BRCA1 and BRCA2.

Link

dbGaP study = phs001017

Keywords

  1. 8/10/23 8/10/23 - Simon Heim
Copyright Holder

Richard K. Wilson, PhD, The Genome Institute, Washington University School of Medicine, St. Louis, MO, USA

Uploaded on

8 de octubre de 2023

DOI

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License

Creative Commons BY 4.0

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    dbGaP phs001017 Breast Cancer Susceptibility

    Subject DI, consent group, and affection status of participants with breast cancer and involved in the "Breast Cancer Susceptibility" project.

    pht005074
    Description

    pht005074

    Alias
    UMLS CUI [1,1]
    C3846158 (Other Coding)
    LOINC
    LA4728-7
    De-identified subject ID
    Description

    SUBJECT_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C4684638 (De-identified Information)
    UMLS CUI [1,2]
    C2348585 (Clinical Trial Subject Unique Identifier)
    Allowable research use
    Description

    CONSENT

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0242481 (Research Activities)
    UMLS CUI [1,2]
    C0683607 (allowing)
    Sex
    Description

    SEX

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C0079399 (Gender)
    SNOMED
    263495000
    LOINC
    LP61312-2

    Similar models

    Subject DI, consent group, and affection status of participants with breast cancer and involved in the "Breast Cancer Susceptibility" project.

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    pht005074
    C3846158 (UMLS CUI [1,1])
    SUBJECT_ID
    Item
    De-identified subject ID
    string
    C4684638 (UMLS CUI [1,1])
    C2348585 (UMLS CUI [1,2])
    Item
    Allowable research use
    text
    C0242481 (UMLS CUI [1,1])
    C0683607 (UMLS CUI [1,2])
    Code List
    Allowable research use
    CL Item
    Disease-Specific (Cancer) (DS-CA) (1)
    CL Item
    Disease-Specific (Breast Cancer) (DS-BRCA) (2)
    Item
    Sex
    text
    C0079399 (UMLS CUI [1,1])
    Code List
    Sex
    CL Item
    Male (1)
    C0086582 (UMLS CUI [1,1])
    CL Item
    Female (2)
    C0086287 (UMLS CUI [1,1])

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