ID

45814

Description

Principal Investigator: Craig L. Hanis, PhD, The University of Texas Health Science Center at Houston, Houston, TX, USA, USA MeSH: Diabetes Mellitus, Type 2 https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001166 *The T2D Seq GWAS Starr County Cohort is utilized in the following dbGaP sub-studies.* To view genotypes, other molecular data, and derived variables collected in these sub-studies, please click on the following sub-studies below or in the "Sub-studies" section of this top-level study page phs001166 T2D Seq GWAS Starr County Cohort.- phs000143 CIDR T2D Hanis - phs001099 T2D GENES Starr County

Lien

dbGaP study = phs001166

Mots-clés

  1. 29/06/2023 29/06/2023 - Simon Heim
Détendeur de droits

Craig L. Hanis, PhD, The University of Texas Health Science Center at Houston, Houston, TX, USA, USA

Téléchargé le

29 juin 2023

DOI

Pour une demande vous connecter.

Licence

Creative Commons BY 4.0

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dbGaP phs001166 Type 2 Diabetes Starr County GWAS and Exome Sequencing

Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.

  1. StudyEvent: SEV1
    1. Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    2. Subject ID, consent group, affection status, subject source, and source subject ID of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    3. Subject ID, sample ID, sample source, source sample ID, study ID, and sample use variable obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    4. Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    5. Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    6. Sample ID, body site where sample was obtained, analyte type, and tumor status of samples of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
pht000644
Description

pht000644

Alias
UMLS CUI [1,1]
C3846158
Case/control status
Description

casestat

Type de données

text

Alias
UMLS CUI [1,1]
C3274646
Age in years
Description

age

Type de données

integer

Unités de mesure
  • Years old
Alias
UMLS CUI [1,1]
C0001779
Years old
Gender
Description

gender

Type de données

text

Alias
UMLS CUI [1,1]
C0079399
Country of birth
Description

usamex

Type de données

text

Alias
UMLS CUI [1,1]
C1300001
Body mass index (BMI)
Description

bmi

Type de données

text

Alias
UMLS CUI [1,1]
C1305855
Waist to hip ratio
Description

wtohip

Type de données

text

Alias
UMLS CUI [1,1]
C0205682
Plasma cholesterol
Description

chol

Type de données

integer

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C0587184
mg/dl
Plasma triglycerides
Description

trig

Type de données

integer

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C0583329
mg/dl
Total plasma high density lipoprotein cholesterol
Description

hdlt

Type de données

integer

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C0428472
mg/dl
Calculated low density lipoprotein cholesterol
Description

ldl

Type de données

integer

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C0202117
mg/dl
Systolic blood pressure
Description

sbp

Type de données

integer

Unités de mesure
  • mmHg
Alias
UMLS CUI [1,1]
C0871470
mmHg
Diastolic blood pressure
Description

dbp

Type de données

integer

Unités de mesure
  • mmHg
Alias
UMLS CUI [1,1]
C0428883
mmHg
Smoking behavior
Description

smoke

Type de données

text

Alias
UMLS CUI [1,1]
C1519386
Fasting glucose
Description

gluc0

Type de données

integer

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C0428568
mg/dl
120 minute post-load glucose
Description

gluc120

Type de données

integer

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C1714484
mg/dl
Age at diabetes diagnosis
Description

dxage

Type de données

integer

Unités de mesure
  • Years old
Alias
UMLS CUI [1,1]
C1828181
UMLS CUI [1,2]
C0011849
Years old
Presence of diabetic retinopathy
Description

retinop

Type de données

text

Alias
UMLS CUI [1,1]
C0011884
Glycosylated hemoglobin
Description

hba1c

Type de données

text

Unités de mesure
  • %
Alias
UMLS CUI [1,1]
C0019018
%
Serum creatinine
Description

creatinine

Type de données

text

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C0600061
mg/dl
Impaired fasting glucose
Description

ifg

Type de données

text

Alias
UMLS CUI [1,1]
C0583513
UMLS CUI [1,2]
C0205161
Impaired glucose tolerance
Description

igt

Type de données

text

Alias
UMLS CUI [1,1]
C0271650
Fasting insulin
Description

ins000

Type de données

text

Unités de mesure
  • mIU/mL
Alias
UMLS CUI [1,1]
C0015663
UMLS CUI [1,2]
C0202098
mIU/mL
Study identification number
Description

SUBJID

Type de données

string

Alias
UMLS CUI [1,1]
C1300638
UMLS CUI [1,2]
C2603343
Urinary albumin
Description

albumin

Type de données

text

Unités de mesure
  • mg/dl
Alias
UMLS CUI [1,1]
C0201838
UMLS CUI [1,2]
C0042036

Similar models

Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.

  1. StudyEvent: SEV1
    1. Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    2. Subject ID, consent group, affection status, subject source, and source subject ID of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    3. Subject ID, sample ID, sample source, source sample ID, study ID, and sample use variable obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    4. Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    5. Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    6. Sample ID, body site where sample was obtained, analyte type, and tumor status of samples of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
pht000644
C3846158 (UMLS CUI [1,1])
casestat
Item
Case/control status
text
C3274646 (UMLS CUI [1,1])
age
Item
Age in years
integer
C0001779 (UMLS CUI [1,1])
gender
Item
Gender
text
C0079399 (UMLS CUI [1,1])
usamex
Item
Country of birth
text
C1300001 (UMLS CUI [1,1])
bmi
Item
Body mass index (BMI)
text
C1305855 (UMLS CUI [1,1])
wtohip
Item
Waist to hip ratio
text
C0205682 (UMLS CUI [1,1])
chol
Item
Plasma cholesterol
integer
C0587184 (UMLS CUI [1,1])
trig
Item
Plasma triglycerides
integer
C0583329 (UMLS CUI [1,1])
hdlt
Item
Total plasma high density lipoprotein cholesterol
integer
C0428472 (UMLS CUI [1,1])
ldl
Item
Calculated low density lipoprotein cholesterol
integer
C0202117 (UMLS CUI [1,1])
sbp
Item
Systolic blood pressure
integer
C0871470 (UMLS CUI [1,1])
dbp
Item
Diastolic blood pressure
integer
C0428883 (UMLS CUI [1,1])
smoke
Item
Smoking behavior
text
C1519386 (UMLS CUI [1,1])
gluc0
Item
Fasting glucose
integer
C0428568 (UMLS CUI [1,1])
gluc120
Item
120 minute post-load glucose
integer
C1714484 (UMLS CUI [1,1])
dxage
Item
Age at diabetes diagnosis
integer
C1828181 (UMLS CUI [1,1])
C0011849 (UMLS CUI [1,2])
retinop
Item
Presence of diabetic retinopathy
text
C0011884 (UMLS CUI [1,1])
hba1c
Item
Glycosylated hemoglobin
text
C0019018 (UMLS CUI [1,1])
creatinine
Item
Serum creatinine
text
C0600061 (UMLS CUI [1,1])
ifg
Item
Impaired fasting glucose
text
C0583513 (UMLS CUI [1,1])
C0205161 (UMLS CUI [1,2])
igt
Item
Impaired glucose tolerance
text
C0271650 (UMLS CUI [1,1])
ins000
Item
Fasting insulin
text
C0015663 (UMLS CUI [1,1])
C0202098 (UMLS CUI [1,2])
SUBJID
Item
Study identification number
string
C1300638 (UMLS CUI [1,1])
C2603343 (UMLS CUI [1,2])
Item
Urinary albumin
text
C0201838 (UMLS CUI [1,1])
C0042036 (UMLS CUI [1,2])
Code List
Urinary albumin
CL Item
Missing (; -99)
CL Item
No albumin (NEG)

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