ID

45814

Beschreibung

Principal Investigator: Craig L. Hanis, PhD, The University of Texas Health Science Center at Houston, Houston, TX, USA, USA MeSH: Diabetes Mellitus, Type 2 https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001166 *The T2D Seq GWAS Starr County Cohort is utilized in the following dbGaP sub-studies.* To view genotypes, other molecular data, and derived variables collected in these sub-studies, please click on the following sub-studies below or in the "Sub-studies" section of this top-level study page phs001166 T2D Seq GWAS Starr County Cohort.- phs000143 CIDR T2D Hanis - phs001099 T2D GENES Starr County

Link

dbGaP study = phs001166

Stichworte

  1. 29.06.23 29.06.23 - Simon Heim
Rechteinhaber

Craig L. Hanis, PhD, The University of Texas Health Science Center at Houston, Houston, TX, USA, USA

Hochgeladen am

29. Juni 2023

DOI

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Lizenz

Creative Commons BY 4.0

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dbGaP phs001166 Type 2 Diabetes Starr County GWAS and Exome Sequencing

Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.

  1. StudyEvent: SEV1
    1. Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    2. Subject ID, consent group, affection status, subject source, and source subject ID of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    3. Subject ID, sample ID, sample source, source sample ID, study ID, and sample use variable obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    4. Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    5. Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    6. Sample ID, body site where sample was obtained, analyte type, and tumor status of samples of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
pht005634
Beschreibung

pht005634

Alias
UMLS CUI [1,1]
C3846158
Sample ID
Beschreibung

SAMPLE_ID

Datentyp

string

Alias
UMLS CUI [1,1]
C1299222
Body site from where sample was taken
Beschreibung

BODY_SITE

Datentyp

string

Alias
UMLS CUI [1,1]
C1515974
UMLS CUI [1,2]
C0200345
Analyte type used
Beschreibung

ANALYTE_TYPE

Datentyp

string

Alias
UMLS CUI [1,1]
C4744818
UMLS CUI [1,2]
C0042153
Tissue/cell type of sample
Beschreibung

HISTOLOGICAL_TYPE

Datentyp

string

Alias
UMLS CUI [1,1]
C2713035
UMLS CUI [1,2]
C0449475
UMLS CUI [1,3]
C0370003
Name of sequencing center
Beschreibung

SEQUENCING_CENTER

Datentyp

string

Alias
UMLS CUI [1,1]
C1301943
UMLS CUI [1,2]
C1561491
UMLS CUI [1,3]
C5575037
Tumor status of sample
Beschreibung

IS_TUMOR

Datentyp

text

Alias
UMLS CUI [1,1]
C0475752

Ähnliche Modelle

Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.

  1. StudyEvent: SEV1
    1. Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    2. Subject ID, consent group, affection status, subject source, and source subject ID of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    3. Subject ID, sample ID, sample source, source sample ID, study ID, and sample use variable obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    4. Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    5. Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    6. Sample ID, body site where sample was obtained, analyte type, and tumor status of samples of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
Name
Typ
Description | Question | Decode (Coded Value)
Datentyp
Alias
Item Group
pht005634
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
BODY_SITE
Item
Body site from where sample was taken
string
C1515974 (UMLS CUI [1,1])
C0200345 (UMLS CUI [1,2])
ANALYTE_TYPE
Item
Analyte type used
string
C4744818 (UMLS CUI [1,1])
C0042153 (UMLS CUI [1,2])
HISTOLOGICAL_TYPE
Item
Tissue/cell type of sample
string
C2713035 (UMLS CUI [1,1])
C0449475 (UMLS CUI [1,2])
C0370003 (UMLS CUI [1,3])
SEQUENCING_CENTER
Item
Name of sequencing center
string
C1301943 (UMLS CUI [1,1])
C1561491 (UMLS CUI [1,2])
C5575037 (UMLS CUI [1,3])
Item
Tumor status of sample
text
C0475752 (UMLS CUI [1,1])
Code List
Tumor status of sample
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])
CL Item
Is tumor (Y)
C0027651 (UMLS CUI [1,1])

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