ID

45814

Beschrijving

Principal Investigator: Craig L. Hanis, PhD, The University of Texas Health Science Center at Houston, Houston, TX, USA, USA MeSH: Diabetes Mellitus, Type 2 https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001166 *The T2D Seq GWAS Starr County Cohort is utilized in the following dbGaP sub-studies.* To view genotypes, other molecular data, and derived variables collected in these sub-studies, please click on the following sub-studies below or in the "Sub-studies" section of this top-level study page phs001166 T2D Seq GWAS Starr County Cohort.- phs000143 CIDR T2D Hanis - phs001099 T2D GENES Starr County

Link

dbGaP study = phs001166

Trefwoorden

  1. 29-06-23 29-06-23 - Simon Heim
Houder van rechten

Craig L. Hanis, PhD, The University of Texas Health Science Center at Houston, Houston, TX, USA, USA

Geüploaded op

29 juni 2023

DOI

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Licentie

Creative Commons BY 4.0

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dbGaP phs001166 Type 2 Diabetes Starr County GWAS and Exome Sequencing

Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.

  1. StudyEvent: SEV1
    1. Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    2. Subject ID, consent group, affection status, subject source, and source subject ID of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    3. Subject ID, sample ID, sample source, source sample ID, study ID, and sample use variable obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    4. Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    5. Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    6. Sample ID, body site where sample was obtained, analyte type, and tumor status of samples of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
pht005633
Beschrijving

pht005633

Alias
UMLS CUI [1,1]
C3846158
Study ID
Beschrijving

SUBJECT_ID

Datatype

text

Alias
UMLS CUI [1,1]
C3274381
Sex
Beschrijving

SEX

Datatype

text

Alias
UMLS CUI [1,1]
C0079399
Age at study
Beschrijving

AGE

Datatype

text

Maateenheden
  • Years
Alias
UMLS CUI [1,1]
C0001779
Years
Diabetes disease status
Beschrijving

T2D

Datatype

text

Alias
UMLS CUI [1,1]
C0011849
Diabetes age of diagnosis at time of study (if affected)
Beschrijving

AOD

Datatype

text

Maateenheden
  • Years
Alias
UMLS CUI [1,1]
C1948053
UMLS CUI [1,2]
C1711239
UMLS CUI [1,3]
C0011900
UMLS CUI [1,4]
C0011849
Years
Fasting glucose
Beschrijving

FAST_GLU

Datatype

text

Maateenheden
  • mmol/l
Alias
UMLS CUI [1,1]
C0202045
mmol/l
Fasting insulin
Beschrijving

FAST_INS

Datatype

text

Maateenheden
  • mU/l
Alias
UMLS CUI [1,1]
C1276042
UMLS CUI [1,2]
C0015663
mU/l
2 hour glucose
Beschrijving

2H_GLU

Datatype

text

Maateenheden
  • mmol/l
Alias
UMLS CUI [1,1]
C2238058
mmol/l
HbA1C
Beschrijving

HBA1C

Datatype

text

Maateenheden
  • fraction, %
Alias
UMLS CUI [1,1]
C0474680
fraction, %
Creatinine
Beschrijving

CREATININE

Datatype

text

Maateenheden
  • mmol/l
Alias
UMLS CUI [1,1]
C0201976
mmol/l
Total cholesterol
Beschrijving

CHOL

Datatype

text

Maateenheden
  • mmol/l
Alias
UMLS CUI [1,1]
C0543421
mmol/l
HDL cholesterol
Beschrijving

HDL

Datatype

text

Maateenheden
  • mmol/l
Alias
UMLS CUI [1,1]
C0428472
mmol/l
Triglycerides
Beschrijving

TG

Datatype

text

Maateenheden
  • mmol/l
Alias
UMLS CUI [1,1]
C0202236
mmol/l
Height
Beschrijving

HEIGHT

Datatype

text

Maateenheden
  • cm
Alias
UMLS CUI [1,1]
C0005890
cm
Weight
Beschrijving

WEIGHT

Datatype

text

Maateenheden
  • kg
Alias
UMLS CUI [1,1]
C0005910
kg
BMI
Beschrijving

BMI

Datatype

text

Maateenheden
  • kg/m2
Alias
UMLS CUI [1,1]
C1305855
kg/m2
Hip circumference
Beschrijving

HIPC

Datatype

text

Maateenheden
  • cm
Alias
UMLS CUI [1,1]
C0562350
cm
Waist circumference
Beschrijving

WAISTC

Datatype

text

Maateenheden
  • cm
Alias
UMLS CUI [1,1]
C0455829
cm
Systolic blood pressure
Beschrijving

SBP

Datatype

text

Maateenheden
  • mmHg
Alias
UMLS CUI [1,1]
C0871470
mmHg
Diastolic blood pressure
Beschrijving

DBP

Datatype

text

Maateenheden
  • mmHg
Alias
UMLS CUI [1,1]
C0428883
mmHg
Lipid medication?
Beschrijving

LIPIDMEDS

Datatype

text

Alias
UMLS CUI [1,1]
C0585943
Consortium name
Beschrijving

CONSORTIUM

Datatype

string

Alias
UMLS CUI [1,1]
C1880171
UMLS CUI [1,2]
C1301943
Cohort name
Beschrijving

COHORT

Datatype

string

Alias
UMLS CUI [1,1]
C0599755
UMLS CUI [1,2]
C0027365

Similar models

Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.

  1. StudyEvent: SEV1
    1. Subject ID, case or control, age, gender, country of birth, BMI, waist of hip ratio, plasma cholesterol, plasma triglycerides, total plasma high density lipoprotein cholesterol, systolic and diastolic blood pressure, smoking, fasting glucose, 120 minute post-load glucose, age at diabetes diagnosis, presence of diabetic retinopathy, glycosylated hemoglobin, serum creatinine, albumin, impaired fasting glucose, Impaired glucose tolerance, and fasting insulin of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    2. Subject ID, consent group, affection status, subject source, and source subject ID of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    3. Subject ID, sample ID, sample source, source sample ID, study ID, and sample use variable obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    4. Subject ID, gender, age, T2D status, age at diagnosis of diabetes, fasting glucose and insulin, glucose, HbA1C, creatinine, total cholesterol, HDL, triglycerides, height, weight, BMI, hip circumference, waist circumference, systolic blood pressure, diastolic blood pressure, lipid medication, consortium name, and cohort name of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    5. Sample ID, body site where sample was obtained, analyte type, histological type of sample, sequencing center, and tumor status of sample obtained from participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
    6. Sample ID, body site where sample was obtained, analyte type, and tumor status of samples of participants with or without T2D and involved in the "Type 2 Diabetes Starr County GWAS and Exome Sequencing" project.
Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht005633
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
Study ID
text
C3274381 (UMLS CUI [1,1])
Item
Sex
text
C0079399 (UMLS CUI [1,1])
Code List
Sex
CL Item
Male (1)
C0086582 (UMLS CUI [1,1])
CL Item
Female (2)
C0086287 (UMLS CUI [1,1])
AGE
Item
Age at study
text
C0001779 (UMLS CUI [1,1])
Item
Diabetes disease status
text
C0011849 (UMLS CUI [1,1])
Code List
Diabetes disease status
CL Item
Not T2D (0)
CL Item
T2D (1)
AOD
Item
Diabetes age of diagnosis at time of study (if affected)
text
C1948053 (UMLS CUI [1,1])
C1711239 (UMLS CUI [1,2])
C0011900 (UMLS CUI [1,3])
C0011849 (UMLS CUI [1,4])
FAST_GLU
Item
Fasting glucose
text
C0202045 (UMLS CUI [1,1])
FAST_INS
Item
Fasting insulin
text
C1276042 (UMLS CUI [1,1])
C0015663 (UMLS CUI [1,2])
2H_GLU
Item
2 hour glucose
text
C2238058 (UMLS CUI [1,1])
HBA1C
Item
HbA1C
text
C0474680 (UMLS CUI [1,1])
CREATININE
Item
Creatinine
text
C0201976 (UMLS CUI [1,1])
CHOL
Item
Total cholesterol
text
C0543421 (UMLS CUI [1,1])
HDL
Item
HDL cholesterol
text
C0428472 (UMLS CUI [1,1])
TG
Item
Triglycerides
text
C0202236 (UMLS CUI [1,1])
HEIGHT
Item
Height
text
C0005890 (UMLS CUI [1,1])
WEIGHT
Item
Weight
text
C0005910 (UMLS CUI [1,1])
BMI
Item
BMI
text
C1305855 (UMLS CUI [1,1])
HIPC
Item
Hip circumference
text
C0562350 (UMLS CUI [1,1])
WAISTC
Item
Waist circumference
text
C0455829 (UMLS CUI [1,1])
SBP
Item
Systolic blood pressure
text
C0871470 (UMLS CUI [1,1])
DBP
Item
Diastolic blood pressure
text
C0428883 (UMLS CUI [1,1])
Item
Lipid medication?
text
C0585943 (UMLS CUI [1,1])
Code List
Lipid medication?
CL Item
No (0)
CL Item
Yes (1)
CONSORTIUM
Item
Consortium name
string
C1880171 (UMLS CUI [1,1])
C1301943 (UMLS CUI [1,2])
COHORT
Item
Cohort name
string
C0599755 (UMLS CUI [1,1])
C0027365 (UMLS CUI [1,2])

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