ID

45770

Beschrijving

Principal Investigator: William C. Hahn, MD, PhD, Dana-Farber Cancer Institute, Boston, MA, USA MeSH: Sarcoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001121 Due to the paucity of patient derived models in rare cancers, identification of therapeutic targets remains challenging. We developed a patient derived model, CLF-PED-015-T, from a patient with an undifferentiated sarcoma. From this model, we performed pooled RNAi and CRISPR-Cas9 negative selection screens and integrated that with a small molecule screen. Integration of these data identified CDK4 and XPO1 as potential therapeutic targets.

Link

dbGaP-study=phs001121

Trefwoorden

  1. 19-06-23 19-06-23 - Chiara Middel
Houder van rechten

William C. Hahn, MD, PhD, Dana-Farber Cancer Institute, Boston, MA, USA

Geüploaded op

19 juni 2023

DOI

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Licentie

Creative Commons BY 4.0

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dbGaP phs001121 Integrated Genetic and Pharmacologic Interrogation of Rare Cancers

This sample attributes table contains sample ID, sample type, tumor type, original material type, and analyte type.

pht005711
Beschrijving

pht005711

Alias
UMLS CUI [1,1]
C3846158
De-identified Sample ID
Beschrijving

SAMPID

Datatype

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Indicates the Tumor / Normal status of a sample
Beschrijving

Sample Type

Datatype

string

Alias
UMLS CUI [1,1]
C1522602
UMLS CUI [1,2]
C0475752
UMLS CUI [1,3]
C0205307
UMLS CUI [1,4]
C0449438
UMLS CUI [1,5]
C2347026
Indicates tumor type of the studied sample
Beschrijving

Tumor Type

Datatype

string

Alias
UMLS CUI [1,1]
C1522602
UMLS CUI [1,2]
C4263544
UMLS CUI [1,3]
C2347026
Original material source of where the nucleic acid was extracted from
Beschrijving

Original Material Type

Datatype

string

Alias
UMLS CUI [1,1]
C0205313
UMLS CUI [1,2]
C0520510
UMLS CUI [1,3]
C0449416
UMLS CUI [1,4]
C0028606
UMLS CUI [1,5]
C0185115
Molecular analyte
Beschrijving

ANALYTE_Type

Datatype

string

Alias
UMLS CUI [1,1]
C1513380
UMLS CUI [1,2]
C0443354

Similar models

This sample attributes table contains sample ID, sample type, tumor type, original material type, and analyte type.

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht005711
C3846158 (UMLS CUI [1,1])
SAMPID
Item
De-identified Sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
Item
Indicates the Tumor / Normal status of a sample
string
C1522602 (UMLS CUI [1,1])
C0475752 (UMLS CUI [1,2])
C0205307 (UMLS CUI [1,3])
C0449438 (UMLS CUI [1,4])
C2347026 (UMLS CUI [1,5])
Code List
Indicates the Tumor / Normal status of a sample
CL Item
Normal (Normal)
CL Item
Tumor (Tumor)
Item
Indicates tumor type of the studied sample
string
C1522602 (UMLS CUI [1,1])
C4263544 (UMLS CUI [1,2])
C2347026 (UMLS CUI [1,3])
Code List
Indicates tumor type of the studied sample
CL Item
Normal (Normal)
CL Item
Primary (Primary)
Item
Original material source of where the nucleic acid was extracted from
string
C0205313 (UMLS CUI [1,1])
C0520510 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
C0028606 (UMLS CUI [1,4])
C0185115 (UMLS CUI [1,5])
Code List
Original material source of where the nucleic acid was extracted from
CL Item
Blood (Blood)
CL Item
Brain Tissue (Brain Tissue)
CL Item
Cell Line (Cell Line)
Item
Molecular analyte
string
C1513380 (UMLS CUI [1,1])
C0443354 (UMLS CUI [1,2])
Code List
Molecular analyte
CL Item
DNA (DNA)
CL Item
DNA & RNA (DNA & RNA)

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