ID

45769

Beschrijving

Principal Investigator: Kathleen C. Barnes, PhD, University of Colorado, Denver, CO, USA MeSH: Asthma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001123 Asthma is a complex disease where the interplay between genetic factors and environmental exposures influences susceptibility and disease prognosis. Asthmatics of African descent tend to have more severe asthma and more severe clinical symptoms than individuals of European ancestry. Advances in genetic and genomic technologies have revolutionized gene discovery for several complex diseases, but going to the next step in gene discovery for asthma among populations of African descent requires considering unique characteristics of this ethnic group, including adequate sample sizes and population stratification due to (European and African) admixture. Thus far, coverage of common genetic markers both in public databases and commercially available SNP chips has been inadequate to detect and measure genetic associations among African admixed populations. The aim of this study was therefore to catalog genetic diversity in populations of African descent, especially those whose ancestry reflects the African Diaspora in the Americas.

Link

dbGaP-study=phs001123

Trefwoorden

  1. 19-06-23 19-06-23 - Chiara Middel
Houder van rechten

Kathleen C. Barnes, PhD, University of Colorado, Denver, CO, USA

Geüploaded op

19 juni 2023

DOI

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Licentie

Creative Commons BY 4.0

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dbGaP phs001123 Consortium on Asthma among African-ancestry Populations in the Americas

This subject phenotype table contains subject ID, sex, ethnicity, cohort, affection status of the subject for Asthma, age, age onset, and genotyping platform for the sample.

pht006061
Beschrijving

pht006061

Alias
UMLS CUI [1,1]
C3846158
De-identified Subject ID
Beschrijving

SUBJECT_ID

Datatype

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Name of the Study for the sample
Beschrijving

COHORT

Datatype

string

Alias
UMLS CUI [1,1]
C2348560
UMLS CUI [1,2]
C2347026
Affection status for the sample
Beschrijving

AFFSTAT

Datatype

text

Alias
UMLS CUI [1,1]
C3274646
Age of the subject when sample was collected
Beschrijving

AGE

Datatype

text

Maateenheden
  • in years
Alias
UMLS CUI [1,1]
C0001779
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C0200345
Sex of participant
Beschrijving

SEX

Datatype

text

Alias
UMLS CUI [1,1]
C0079399
Age of asthma onset
Beschrijving

AGE_ONSET

Datatype

text

Maateenheden
  • in years
Alias
UMLS CUI [1,1]
C0206132
UMLS CUI [1,2]
C0004096
Genotyping platform for the sample
Beschrijving

ARRAY

Datatype

string

Alias
UMLS CUI [1,1]
C1285573
UMLS CUI [1,2]
C1710360
UMLS CUI [1,3]
C0370003
Enthnicity for the sample
Beschrijving

ETHNICITY

Datatype

string

Alias
UMLS CUI [1,1]
C0015031
UMLS CUI [1,2]
C2347026

Similar models

This subject phenotype table contains subject ID, sex, ethnicity, cohort, affection status of the subject for Asthma, age, age onset, and genotyping platform for the sample.

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht006061
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
De-identified Subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Name of the Study for the sample
string
C2348560 (UMLS CUI [1,1])
C2347026 (UMLS CUI [1,2])
Code List
Name of the Study for the sample
CL Item
Not applicable/unknown (NA)
C1272460 (UMLS CUI [1,1])
Item
Affection status for the sample
text
C3274646 (UMLS CUI [1,1])
Code List
Affection status for the sample
CL Item
Control (1)
C3274648 (UMLS CUI [1,1])
CL Item
Case (2)
C3274647 (UMLS CUI [1,1])
CL Item
Not applicable/unknown (NA)
C1272460 (UMLS CUI [1,1])
Item
Age of the subject when sample was collected
text
C0001779 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0200345 (UMLS CUI [1,3])
Code List
Age of the subject when sample was collected
CL Item
Not applicable/unknown (NA)
C1272460 (UMLS CUI [1,1])
Item
Sex of participant
text
C0079399 (UMLS CUI [1,1])
Code List
Sex of participant
CL Item
Male (1)
C0086582 (UMLS CUI [1,1])
CL Item
Female (2)
C0086287 (UMLS CUI [1,1])
CL Item
Not applicable/unknown (NA)
C1272460 (UMLS CUI [1,1])
Item
Age of asthma onset
text
C0206132 (UMLS CUI [1,1])
C0004096 (UMLS CUI [1,2])
Code List
Age of asthma onset
CL Item
Not applicable/unknown (NA)
C1272460 (UMLS CUI [1,1])
Item
Genotyping platform for the sample
string
C1285573 (UMLS CUI [1,1])
C1710360 (UMLS CUI [1,2])
C0370003 (UMLS CUI [1,3])
Code List
Genotyping platform for the sample
CL Item
African Diaspora Power Chip (ADPC)
CL Item
Multi-Ethnic Genotyping Array (MEGA)
CL Item
Whole Genome Sequencing (WGS)
C3640076 (UMLS CUI [1,1])
ETHNICITY
Item
Enthnicity for the sample
string
C0015031 (UMLS CUI [1,1])
C2347026 (UMLS CUI [1,2])

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