ID

45767

Beschrijving

Principal Investigator: Rameen Beroukhim, MD, PhD, Dana-Farber Cancer Institute, Boston, MA, USA, Brigham and Women's Hospital, Boston, MA, USA, Broad Institute of MIT and Harvard, Cambridge, MA, USA MeSH: Endometrial Neoplasms,Neoplasm Metastasis https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001127 Formation of metastases is the major cause of cancer related deaths. Recent studies have sequenced primary endometrial carcinomas yielding data for a single entity in the progression from the birth of a progenitor tumor cell to metastatic disease. However, the progression of these tumors to metastases has not been characterized. We performed whole-exome sequencing of 98 tumor biopsies including complex atypical hyperplasias, primary tumors and paired abdominopelvic metastases to survey the evolutionary landscape of endometrial cancer. We expanded and reanalyzed TCGA-data, identifying novel recurrent alterations in primary tumors, including mutations in the estrogen receptor cofactor *NRIP1* in 12% of patients. We found that likely driver events tended to be shared by primary and metastatic tissue-samples, with notable exceptions such as *ARID1A* mutations. Phylogenetic analyses in cases with multiple metastases indicated these metastases typically arose from one lineage of the primary tumor. These data indicate extensive genetic heterogeneity within endometrial cancers and relative homogeneity across metastatic sites.

Link

dbGaP-study=phs001127

Trefwoorden

  1. 19-06-23 19-06-23 - Chiara Middel
Houder van rechten

Rameen Beroukhim, MD, PhD, Dana-Farber Cancer Institute, Boston, MA, USA, Brigham and Women's Hospital, Boston, MA, USA, Broad Institute of MIT and Harvard, Cambridge, MA, USA

Geüploaded op

19 juni 2023

DOI

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Licentie

Creative Commons BY 4.0

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dbGaP phs001127 Genomic Analysis of Paired Endometrial Cancer Primaries and Metastases

Sample ID, sample type [Tumor/Normal], primary or secondary tumor, source of the DNA sample, and molecular analyte of participants with endometrial cancer and involved in the "Genomic Analysis of Paired Endometrial Cancer Primaries and Metastases" project.

pht005528
Beschrijving

pht005528

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Beschrijving

SAMPID

Datatype

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Indicates the Tumor / Normal status of a sample
Beschrijving

Sample Type

Datatype

string

Alias
UMLS CUI [1,1]
C1522602
UMLS CUI [1,2]
C0475752
UMLS CUI [1,3]
C0205307
UMLS CUI [1,4]
C0449438
UMLS CUI [1,5]
C2347026
Indicates primary or secondary tumor
Beschrijving

Tumor Type

Datatype

string

Alias
UMLS CUI [1,1]
C1522602
UMLS CUI [1,2]
C0677930
UMLS CUI [1,3]
C3266877
Indicates the tissue source off the DNA sample
Beschrijving

Tissue_Location

Datatype

string

Alias
UMLS CUI [1,1]
C1522602
UMLS CUI [1,2]
C1292533
UMLS CUI [1,3]
C0449416
UMLS CUI [1,4]
C0012854
Molecular analyte
Beschrijving

ANALYTE_Type

Datatype

string

Alias
UMLS CUI [1,1]
C1513380
UMLS CUI [1,2]
C0443354

Similar models

Sample ID, sample type [Tumor/Normal], primary or secondary tumor, source of the DNA sample, and molecular analyte of participants with endometrial cancer and involved in the "Genomic Analysis of Paired Endometrial Cancer Primaries and Metastases" project.

Name
Type
Description | Question | Decode (Coded Value)
Datatype
Alias
Item Group
pht005528
C3846158 (UMLS CUI [1,1])
SAMPID
Item
De-identified sample ID
string
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
Sample Type
Item
Indicates the Tumor / Normal status of a sample
string
C1522602 (UMLS CUI [1,1])
C0475752 (UMLS CUI [1,2])
C0205307 (UMLS CUI [1,3])
C0449438 (UMLS CUI [1,4])
C2347026 (UMLS CUI [1,5])
Tumor Type
Item
Indicates primary or secondary tumor
string
C1522602 (UMLS CUI [1,1])
C0677930 (UMLS CUI [1,2])
C3266877 (UMLS CUI [1,3])
Tissue_Location
Item
Indicates the tissue source off the DNA sample
string
C1522602 (UMLS CUI [1,1])
C1292533 (UMLS CUI [1,2])
C0449416 (UMLS CUI [1,3])
C0012854 (UMLS CUI [1,4])
ANALYTE_Type
Item
Molecular analyte
string
C1513380 (UMLS CUI [1,1])
C0443354 (UMLS CUI [1,2])

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