ID

45754

Description

Principal Investigator: Carole Ober, PhD, University of Chicago, Chicago, IL, USA MeSH: Asthma,Serum IgE https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001156 The EVE Asthma Genetics Consortium comprises U.S. investigators who have conducted genome-wide association studies (GWAS) of asthma; the main objective is to combine results of individual studies to increase the overall power to identify loci for asthma and asthma-associated traits. The consortium includes investigators at 9 U.S. institutions with GWAS results for 10,000 individuals representing European American, African American, African Caribbean, U.S. Hispanic, and Mexican populations and includes the following studies:- The Study of Asthma Phenotypes and Pharmacogenomic Interactions by Race-Ethnicity (SAPPHIRE) - The Genetic Research on Asthma in the African Diaspora (GRAAD) Study - The Genetics of Asthma in Latino Americans (GALA 1) Study - The Childhood Asthma Management Program (CAMP) - The Childhood Asthma Research and Education (CARE) Network - The Children's Health Study (CHS) - Mexico City Childhood Asthma Study (MCCAS) - The Chicago Asthma Genetics Study (CAG)* liThe National Heart, Lung, and Blood Institute Collaborative Studies of the Genetics of Asthma (CSGA)*/li liThe Severe Asthma Research Program (SARP)*/li (*CAG, CSGA, and SARP are part of the NHLBI-supported SNP Typing for Association with Multiple Phenotypes from Existing Epidemiologic Data (STAMPEED) consortium.) For the GWAS, we developed a common set of 1 million genotyped and imputed SNPs from the EVE Asthma Genetics Consortium to be tested for association with asthma and associated phenotypes in all samples and combined p-values for a grand meta-analysis for asthma gene discovery. A subset of 296 individuals representing African American, European American, and Latino ancestry were selected for whole genome sequencing. The broad goals of this project were to characterize the genetic architecture of asthma and associated quantitative phenotypes (e.g., lung function, total serum IgE) in ethnically diverse populations from the U.S., Mexico, Puerto Rico, and Barbados.

Link

dbGaP-study=phs001156

Keywords

  1. 6/5/23 6/5/23 - Chiara Middel
Copyright Holder

Carole Ober, PhD, University of Chicago, Chicago, IL, USA

Uploaded on

June 5, 2023

DOI

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License

Creative Commons BY 4.0

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dbGaP phs001156 The EVE Asthma Genetics Consortium: Building Upon GWAS

This subject phenotype data table includes subject's gender, race (n=2 variables), asthma status, age of asthma onset and diagnosis, allergy symptoms, skin test results for any aeroallergen, and food allergy diagnosis.

pht007050
Description

pht007050

Alias
UMLS CUI [1,1]
C3846158
Subject ID
Description

SUBJID

Data type

text

Alias
UMLS CUI [1,1]
C2348585
Corresponding Study
Description

Study_Designation

Data type

text

Alias
UMLS CUI [1,1]
C0332281
UMLS CUI [1,2]
C0008976
Asthma Case?
Description

Asthma

Data type

text

Alias
UMLS CUI [1,1]
C0004096
UMLS CUI [1,2]
C1698493
Gender
Description

Gender

Data type

text

Alias
UMLS CUI [1,1]
C0079399
Subject Ethnicity
Description

Race

Data type

text

Alias
UMLS CUI [1,1]
C0015031
Subject Ethnicity (specify)
Description

Race_Specify

Data type

text

Alias
UMLS CUI [1,1]
C0015031
UMLS CUI [1,2]
C1521902
Asthma symptom onset?
Description

AgeOnset

Data type

text

Measurement units
  • years
Alias
UMLS CUI [1,1]
C0004096
UMLS CUI [1,2]
C1457887
UMLS CUI [1,3]
C0439659
years
Doc diagnosed asthma
Description

AgeOnset_Doc_dx

Data type

text

Measurement units
  • years
Alias
UMLS CUI [1,1]
C0031831
UMLS CUI [1,2]
C0011900
UMLS CUI [1,3]
C0004096
Allergy symptoms?
Description

Allergies

Data type

text

Alias
UMLS CUI [1,1]
C0020517
UMLS CUI [1,2]
C1457887
Skin test positive for any aeroallergen
Description

Spt_AnyAeroallergen

Data type

text

Alias
UMLS CUI [1,1]
C0430561
UMLS CUI [1,2]
C1446409
UMLS CUI [1,3]
C0001697
Doc diagnosed allergy to foods?
Description

food_allergy_Doc_dx

Data type

text

Alias
UMLS CUI [1,1]
C0031831
UMLS CUI [1,2]
C0011900
UMLS CUI [1,3]
C0016470

Similar models

This subject phenotype data table includes subject's gender, race (n=2 variables), asthma status, age of asthma onset and diagnosis, allergy symptoms, skin test results for any aeroallergen, and food allergy diagnosis.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht007050
C3846158 (UMLS CUI [1,1])
SUBJID
Item
Subject ID
text
C2348585 (UMLS CUI [1,1])
Study_Designation
Item
Corresponding Study
text
C0332281 (UMLS CUI [1,1])
C0008976 (UMLS CUI [1,2])
Item
Asthma Case?
text
C0004096 (UMLS CUI [1,1])
C1698493 (UMLS CUI [1,2])
Code List
Asthma Case?
CL Item
No (N)
CL Item
Yes (Y)
Item
Gender
text
C0079399 (UMLS CUI [1,1])
Code List
Gender
CL Item
Female (F)
C0086287 (UMLS CUI [1,1])
CL Item
Male (M)
C0086582 (UMLS CUI [1,1])
Item
Subject Ethnicity
text
C0015031 (UMLS CUI [1,1])
Code List
Subject Ethnicity
CL Item
European (non-Jewish) (1)
CL Item
European (Jewish) (2)
CL Item
Hispanic/Latino (3)
CL Item
Black or African American (4)
CL Item
American Indian or Alaskan Native (5)
CL Item
East/Southeast Asian (6)
CL Item
Asian Indian (7)
CL Item
Native Hawaiian (8)
CL Item
Other (9)
CL Item
Multiple Races (10)
C0034510 (UMLS CUI [1,1])
CL Item
Uncertain (11)
CL Item
Refused (12)
Race_Specify
Item
Subject Ethnicity (specify)
text
C0015031 (UMLS CUI [1,1])
C1521902 (UMLS CUI [1,2])
AgeOnset
Item
Asthma symptom onset?
text
C0004096 (UMLS CUI [1,1])
C1457887 (UMLS CUI [1,2])
C0439659 (UMLS CUI [1,3])
Item
Doc diagnosed asthma
text
C0031831 (UMLS CUI [1,1])
C0011900 (UMLS CUI [1,2])
C0004096 (UMLS CUI [1,3])
Code List
Doc diagnosed asthma
CL Item
Don't know (DK)
CL Item
No (N)
CL Item
Yes (Y)
Item
Allergy symptoms?
text
C0020517 (UMLS CUI [1,1])
C1457887 (UMLS CUI [1,2])
Code List
Allergy symptoms?
CL Item
Don't know (DK)
CL Item
No (N)
CL Item
Yes (Y)
Item
Skin test positive for any aeroallergen
text
C0430561 (UMLS CUI [1,1])
C1446409 (UMLS CUI [1,2])
C0001697 (UMLS CUI [1,3])
Code List
Skin test positive for any aeroallergen
CL Item
Don't know (DK)
CL Item
No (N)
CL Item
Yes (Y)
Item
Doc diagnosed allergy to foods?
text
C0031831 (UMLS CUI [1,1])
C0011900 (UMLS CUI [1,2])
C0016470 (UMLS CUI [1,3])
Code List
Doc diagnosed allergy to foods?
CL Item
Don't know (DK)
CL Item
No (N)
CL Item
Yes (Y)

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