ID

45747

Description

Principal Investigator: Sanjay Shete, PhD, UT MD Anderson Cancer Center, Houston, TX, USA MeSH: Carcinoma, squamous cell of head and neck https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001173 Head and neck cancers have well-documented associations with tobacco and alcohol exposure, but the disease develops in only a small fraction of users, which implies an important role for genetic susceptibility. Therefore, head and neck cancers are an excellent model for studying genetic susceptibility to environmental carcinogens. The primary goal of this study is to perform a comprehensive two-stage, high-density, genome-wide single-nucleotide polymorphism (SNP) analysis of head and neck cancer cases and corresponding frequency matched controls to identify novel genetic risk factors for head and neck cancer. In the study, we genotyped 2242 head and neck cancer cases and 1198 controls using Illumina HumanOmniExpress-12v1 BeadChip.

Lien

dbGaP-study=phs001173

Mots-clés

  1. 04/06/2023 04/06/2023 - Chiara Middel
Détendeur de droits

Sanjay Shete, PhD, UT MD Anderson Cancer Center, Houston, TX, USA

Téléchargé le

4 juin 2023

DOI

Pour une demande vous connecter.

Licence

Creative Commons BY 4.0

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dbGaP phs001173 Head and Neck Cancer Genome-wide Association Study

Eligibility Criteria

Inclusion and exclusion criteria
Description

Inclusion and exclusion criteria

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0680251
*Inclusion:* The participants will be recruited for the study if they meet the following criteria: a. Newly diagnosed, untreated, histopathologically confirmed head and neck cancers; b. Cancer-free individuals to be used as controls; c. For the case, history of non-melanoma (squamous cell or basal cell) skin cancer or previously surgically treated in situ cervical cancer is eligible; d. U.S. resident with head and neck cancer or cancer-free control; e. Age 18 years or older; f. No blood transfusions in the last 6 months; g. Agree to venipuncture and for the cases agree to use of residual tissue specimen; h. Agree to complete a "Head and Neck Study" questionnaire interview and a self-administered food-frequency questionnaire.
Description

Elig.phs001173.v1.p1.1

Type de données

boolean

Alias
UMLS CUI [1,1]
C0242800
UMLS CUI [1,2]
C1550543
UMLS CUI [1,3]
C1516637
UMLS CUI [2,1]
C1518321
UMLS CUI [2,2]
C0332155
UMLS CUI [2,3]
C0679557
UMLS CUI [2,4]
C0278996
UMLS CUI [3,1]
C0009932
UMLS CUI [3,2]
C0332296
UMLS CUI [3,3]
C0006826
UMLS CUI [4,1]
C1298908
UMLS CUI [4,2]
C0680251
UMLS CUI [4,3]
C0007117
UMLS CUI [4,4]
C0553723
UMLS CUI [4,5]
C0851140
UMLS CUI [4,6]
C1514463
UMLS CUI [4,7]
C0543467
UMLS CUI [5,1]
C0237096
UMLS CUI [5,2]
C0041703
UMLS CUI [5,3]
C0278996
UMLS CUI [5,4]
C0009932
UMLS CUI [5,5]
C0332296
UMLS CUI [5,6]
C0006826
UMLS CUI [6,1]
C0001779
UMLS CUI [7,1]
C1298908
UMLS CUI [7,2]
C0005841
UMLS CUI [7,3]
C1517741
UMLS CUI [7,4]
C0205452
UMLS CUI [7,5]
C0439231
UMLS CUI [8,1]
C3641827
UMLS CUI [8,2]
C0190979
UMLS CUI [8,3]
C1698493
UMLS CUI [8,4]
C1999230
UMLS CUI [8,5]
C0475358
UMLS CUI [9,1]
C3641827
UMLS CUI [9,2]
C0205197
UMLS CUI [9,3]
C0278996
UMLS CUI [9,4]
C0034394
UMLS CUI [9,5]
C0021822
UMLS CUI [9,6]
C1519231
UMLS CUI [9,7]
C0016452
UMLS CUI [9,8]
C0439603
UMLS CUI [9,9]
C0034394
*Exclusion:* Anything that does not fit the inclusion criteria.
Description

Elig.phs001173.v1.p1.2

Type de données

boolean

Alias
UMLS CUI [1,1]
C0680251

Similar models

Eligibility Criteria

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
Inclusion and exclusion criteria
C1512693 (UMLS CUI [1,1])
C0680251 (UMLS CUI [1,2])
Elig.phs001173.v1.p1.1
Item
*Inclusion:* The participants will be recruited for the study if they meet the following criteria: a. Newly diagnosed, untreated, histopathologically confirmed head and neck cancers; b. Cancer-free individuals to be used as controls; c. For the case, history of non-melanoma (squamous cell or basal cell) skin cancer or previously surgically treated in situ cervical cancer is eligible; d. U.S. resident with head and neck cancer or cancer-free control; e. Age 18 years or older; f. No blood transfusions in the last 6 months; g. Agree to venipuncture and for the cases agree to use of residual tissue specimen; h. Agree to complete a "Head and Neck Study" questionnaire interview and a self-administered food-frequency questionnaire.
boolean
C0242800 (UMLS CUI [1,1])
C1550543 (UMLS CUI [1,2])
C1516637 (UMLS CUI [1,3])
C1518321 (UMLS CUI [2,1])
C0332155 (UMLS CUI [2,2])
C0679557 (UMLS CUI [2,3])
C0278996 (UMLS CUI [2,4])
C0009932 (UMLS CUI [3,1])
C0332296 (UMLS CUI [3,2])
C0006826 (UMLS CUI [3,3])
C1298908 (UMLS CUI [4,1])
C0680251 (UMLS CUI [4,2])
C0007117 (UMLS CUI [4,3])
C0553723 (UMLS CUI [4,4])
C0851140 (UMLS CUI [4,5])
C1514463 (UMLS CUI [4,6])
C0543467 (UMLS CUI [4,7])
C0237096 (UMLS CUI [5,1])
C0041703 (UMLS CUI [5,2])
C0278996 (UMLS CUI [5,3])
C0009932 (UMLS CUI [5,4])
C0332296 (UMLS CUI [5,5])
C0006826 (UMLS CUI [5,6])
C0001779 (UMLS CUI [6,1])
C1298908 (UMLS CUI [7,1])
C0005841 (UMLS CUI [7,2])
C1517741 (UMLS CUI [7,3])
C0205452 (UMLS CUI [7,4])
C0439231 (UMLS CUI [7,5])
C3641827 (UMLS CUI [8,1])
C0190979 (UMLS CUI [8,2])
C1698493 (UMLS CUI [8,3])
C1999230 (UMLS CUI [8,4])
C0475358 (UMLS CUI [8,5])
C3641827 (UMLS CUI [9,1])
C0205197 (UMLS CUI [9,2])
C0278996 (UMLS CUI [9,3])
C0034394 (UMLS CUI [9,4])
C0021822 (UMLS CUI [9,5])
C1519231 (UMLS CUI [9,6])
C0016452 (UMLS CUI [9,7])
C0439603 (UMLS CUI [9,8])
C0034394 (UMLS CUI [9,9])
Elig.phs001173.v1.p1.2
Item
*Exclusion:* Anything that does not fit the inclusion criteria.
boolean
C0680251 (UMLS CUI [1,1])

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