ID

45740

Description

Principal Investigator: Kathleen Cooney, University of Michigan Ann Arbor, MI, USA MeSH: Prostatic Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001185 This is a genome-wide association scan of 931 early-onset prostate cancer cases of European ancestry. The samples were selected from prostate cancer studies at the University of Michigan. Controls were previously genotyped individuals selected from the Cancer Genetics Markers of Susceptibility (CGEMS) and Illumina's iControlDB database.

Link

dbGaP-study=phs001185

Keywords

  1. 6/2/23 6/2/23 - Chiara Middel
Copyright Holder

Kathleen Cooney, University of Michigan Ann Arbor, MI, USA

Uploaded on

June 2, 2023

DOI

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License

Creative Commons BY 4.0

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dbGaP phs001185 Genome-Wide Scan of Early-onset Prostate Cancer

Sample ID, analyte type, body site where sample was obtained, and tumor status of sample obtained from participants with early-onset prostate cancer and involved in the "Genome-Wide Scan for Genetic Variants Associated with Early-Onset Prostate Cancer" project.

pht005765
Description

pht005765

Alias
UMLS CUI [1,1]
C3846158
De-identified sample ID
Description

SAMPLE_ID

Data type

text

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C1299222
Body site where sample was collected
Description

BODY_SITE

Data type

text

Alias
UMLS CUI [1,1]
C0449705
Analyte type
Description

ANALYTE_TYPE

Data type

text

Alias
UMLS CUI [1,1]
C4744818
Tumor status
Description

IS_TUMOR

Data type

text

Alias
UMLS CUI [1,1]
C0475752

Similar models

Sample ID, analyte type, body site where sample was obtained, and tumor status of sample obtained from participants with early-onset prostate cancer and involved in the "Genome-Wide Scan for Genetic Variants Associated with Early-Onset Prostate Cancer" project.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht005765
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
De-identified sample ID
text
C4684638 (UMLS CUI [1,1])
C1299222 (UMLS CUI [1,2])
BODY_SITE
Item
Body site where sample was collected
text
C0449705 (UMLS CUI [1,1])
ANALYTE_TYPE
Item
Analyte type
text
C4744818 (UMLS CUI [1,1])
Item
Tumor status
text
C0475752 (UMLS CUI [1,1])
Code List
Tumor status
CL Item
Is not a tumor (N)
C0027651 (UMLS CUI [1,1])
C1518422 (UMLS CUI [1,2])

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