ID

45703

Description

Principal Investigator: Scott M. Dehm, PhD, Masonic Cancer Center, University of Minnesota, Minneapolis, MN, Departments of Laboratory Medicine and Pathology and Urology, University of Minnesota, Minneapolis, MN, USA MeSH: Prostatic Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001223 Molecularly-targeted therapies for advanced prostate cancer include castration modalities that suppress ligand-dependent transcriptional activity of the androgen receptor (AR). However, persistent AR signaling undermines therapeutic efficacy and promotes progression to lethal castration-resistant prostate cancer (CRPC), even when patients are treated with potent second-generation AR-targeted therapies abiraterone and enzalutamide. Here we define diverse AR genomic structural rearrangements (AR-GSRs) as a class of molecular alterations occurring in one third of CRPC-stage tumors. AR-GSRs occur in the context of copy-neutral and amplified AR and display heterogeneity in breakpoint location, rearrangement class, and sub-clonal enrichment in tumors within and between patients. Despite this heterogeneity, one common outcome in tumors with high sub-clonal enrichment of AR-GSRs is outlier expression of diverse AR variant species lacking the ligand binding domain and possessing ligand-independent transcriptional activity. Collectively, these findings reveal AR-GSRs as important drivers of persistent AR signaling in CRPC.

Link

dbGaP-study=phs001223

Keywords

  1. 5/16/23 5/16/23 - Chiara Middel
Copyright Holder

Scott M. Dehm, PhD, Masonic Cancer Center, University of Minnesota, Minneapolis, MN, Departments of Laboratory Medicine and Pathology and Urology, University of Minnesota, Minneapolis, MN, USA

Uploaded on

May 16, 2023

DOI

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License

Creative Commons BY 4.0

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dbGaP phs001223 Analysis of AR Gene Rearrangements in Prostate Cancer

Subject ID, gender, prostate cancer onset age, presence of metastases, primary tumor, metastasis, or transformed cell line, and Gleason score of participants with prostate cancer and involved in the "Analysis of AR Gene Rearrangements in Prostate Cancer" project.

pht005801
Description

pht005801

Alias
UMLS CUI [1,1]
C3846158
De-identified subject ID
Description

SUBJECT_ID

Data type

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Gender of participant
Description

sex

Data type

text

Alias
UMLS CUI [1,1]
C0079399
Gleason score
Description

gleason

Data type

string

Alias
UMLS CUI [1,1]
C3203027
Disease onset age
Description

age_at_diagnosis

Data type

text

Measurement units
  • Years
Alias
UMLS CUI [1,1]
C0206132
Years
Presence of metastases
Description

metastases

Data type

text

Alias
UMLS CUI [1,1]
C3854307
UMLS CUI [1,2]
C0027627

Similar models

Subject ID, gender, prostate cancer onset age, presence of metastases, primary tumor, metastasis, or transformed cell line, and Gleason score of participants with prostate cancer and involved in the "Analysis of AR Gene Rearrangements in Prostate Cancer" project.

Name
Type
Description | Question | Decode (Coded Value)
Data type
Alias
Item Group
pht005801
C3846158 (UMLS CUI [1,1])
SUBJECT_ID
Item
De-identified subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
Code List
Gender of participant
CL Item
Female (F)
C0086287 (UMLS CUI [1,1])
CL Item
Male (M)
C0086582 (UMLS CUI [1,1])
gleason
Item
Gleason score
string
C3203027 (UMLS CUI [1,1])
age_at_diagnosis
Item
Disease onset age
text
C0206132 (UMLS CUI [1,1])
Item
Presence of metastases
text
C3854307 (UMLS CUI [1,1])
C0027627 (UMLS CUI [1,2])
Code List
Presence of metastases
CL Item
No (N)
CL Item
Yes (Y)

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