0 Avaliações

ID

45693

Descrição

Principal Investigator: Donna K. Arnett, PhD, School of Public Health, University of Kentucky, Lexington, KY, USA MeSH: Hypertrophy, Left Ventricular,Antihypertensive Agents,Blood Pressure,Diastolic Pressure,Echocardiography,Heart Atria,Heart Ventricles,Hypertension,Stroke Volume,Systolic Pressure,Ventricular Dysfunction, Left,Ventricular Ejection Fraction,Ventricular Function, Left,Ventricular Remodeling https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001293 The Hypertension Genetic Epidemiology Network Study (HyperGEN) - Genetics of Left Ventricular (LV) Hypertrophy is a familial study aimed to understand genetic risk factors for LV hypertrophy by conducting genetic studies of continuous traits from echocardiography exams. The originating HyperGEN study aimed to understand genetic risk factors for hypertension. Data from detailed clinical exams as well as genotyping data for linkage studies, candidate gene studies and GWAS have been collected and is shared between HyperGEN and the ancillary HyperGEN - Genetics of LV Hypertrophy study.

Link

dbGaP-study=phs001293

Palavras-chave

  1. 09/05/2023 09/05/2023 - Chiara Middel
Titular dos direitos

Donna K. Arnett, PhD, School of Public Health, University of Kentucky, Lexington, KY, USA

Transferido a

9 de maio de 2023

DOI

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Licença

Creative Commons BY 4.0

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    dbGaP phs001293 NHLBI TOPMed: HyperGEN - Genetics of Left Ventricular (LV) Hypertrophy

    The subject consent data table contains subject IDs, consent group information, subject aliases, and affection status. All subjects are controls for studying continuous traits from echocardiography exams.

    1. StudyEvent: SEV1
      1. Eligibility Criteria
      2. The subject consent data table contains subject IDs, consent group information, subject aliases, and affection status. All subjects are controls for studying continuous traits from echocardiography exams.
      3. This pedigree data table contains family relationships in the format of family IDs, subject IDs, father IDs, mother IDs, sex of subjects, and monozygotic twin IDs.
      4. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs.
      5. This subject phenotypes data table includes age, sex, race, education, field center and lab ID, medical history (n=13 variables; menopause, pregnancy, preeclampsia, hormone medication, heart attack, heart bypass, and stroke), hypertension status (n=2 variables), diabetes status, anthropometric measures (n=15 variables; waist, hip, triceps, subscapularis, elbow, weight, height, BMI, percent body fat), blood pressure and pulse (n=33 variables; systolic, diastolic, sitting, standing, mean arterial pressure), echocardiographic measurements (n=12 variables), blood and urine measurements (n=34 variables), medications (n=12 variables), alcohol use (n=11 variables), and smoking status (n=4 variables).
      6. This sample attributes table includes body site where sample was collected, analyte type, tumor status, sequencing center, funding source, TOPMed phase, project, and study name.
    pht008893
    Descrição

    pht008893

    Alias
    UMLS CUI [1,1]
    C3846158
    Subject ID
    Descrição

    SUBJECT_ID

    Tipo de dados

    text

    Alias
    UMLS CUI [1,1]
    C2348585
    Consent group as determined by DAC
    Descrição

    CONSENT

    Tipo de dados

    text

    Alias
    UMLS CUI [1,1]
    C0021430
    UMLS CUI [1,2]
    C0441833
    Case control status of the subject
    Descrição

    AFFECTION_STATUS

    Tipo de dados

    text

    Alias
    UMLS CUI [1,1]
    C3274646
    Repository name for dbGaP study also containing this individual
    Descrição

    SUBJECT_SOURCE

    Tipo de dados

    string

    Alias
    UMLS CUI [1,1]
    C3847505
    UMLS CUI [1,2]
    C0027365
    UMLS CUI [1,3]
    C0008976
    UMLS CUI [1,4]
    C0332256
    UMLS CUI [1,5]
    C0237401
    Subject ID used in the SUBJECT_SOURCE repository
    Descrição

    SOURCE_SUBJECT_ID

    Tipo de dados

    string

    Alias
    UMLS CUI [1,1]
    C2348585
    UMLS CUI [1,2]
    C3847505
    UMLS CUI [1,3]
    C0449416

    Similar models

    The subject consent data table contains subject IDs, consent group information, subject aliases, and affection status. All subjects are controls for studying continuous traits from echocardiography exams.

    1. StudyEvent: SEV1
      1. Eligibility Criteria
      2. The subject consent data table contains subject IDs, consent group information, subject aliases, and affection status. All subjects are controls for studying continuous traits from echocardiography exams.
      3. This pedigree data table contains family relationships in the format of family IDs, subject IDs, father IDs, mother IDs, sex of subjects, and monozygotic twin IDs.
      4. This subject sample mapping data table includes a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs.
      5. This subject phenotypes data table includes age, sex, race, education, field center and lab ID, medical history (n=13 variables; menopause, pregnancy, preeclampsia, hormone medication, heart attack, heart bypass, and stroke), hypertension status (n=2 variables), diabetes status, anthropometric measures (n=15 variables; waist, hip, triceps, subscapularis, elbow, weight, height, BMI, percent body fat), blood pressure and pulse (n=33 variables; systolic, diastolic, sitting, standing, mean arterial pressure), echocardiographic measurements (n=12 variables), blood and urine measurements (n=34 variables), medications (n=12 variables), alcohol use (n=11 variables), and smoking status (n=4 variables).
      6. This sample attributes table includes body site where sample was collected, analyte type, tumor status, sequencing center, funding source, TOPMed phase, project, and study name.
    Name
    Tipo
    Description | Question | Decode (Coded Value)
    Tipo de dados
    Alias
    Item Group
    pht008893
    C3846158 (UMLS CUI [1,1])
    SUBJECT_ID
    Item
    Subject ID
    text
    C2348585 (UMLS CUI [1,1])
    Item
    Consent group as determined by DAC
    text
    C0021430 (UMLS CUI [1,1])
    C0441833 (UMLS CUI [1,2])
    Code List
    Consent group as determined by DAC
    CL Item
    Subjects did not participate in the study, did not complete a consent document and are included only for the pedigree structure and/or genotype controls, such as HapMap subjects (0)
    C5418626 (UMLS CUI [1,1])
    C0549184 (UMLS CUI [1,2])
    C0009797 (UMLS CUI [1,3])
    C0205257 (UMLS CUI [1,4])
    C2700399 (UMLS CUI [1,5])
    C0030761 (UMLS CUI [1,6])
    C5418626 (UMLS CUI [2,1])
    C0549184 (UMLS CUI [2,2])
    C0009797 (UMLS CUI [2,3])
    C0205257 (UMLS CUI [2,4])
    C2700399 (UMLS CUI [2,5])
    C0017431 (UMLS CUI [2,6])
    C4553389 (UMLS CUI [2,7])
    CL Item
    General Research Use (IRB) (GRU-IRB) (1)
    C0021430 (UMLS CUI [1,1])
    C0242481 (UMLS CUI [1,2])
    CL Item
    Disease-Specific (Cardiovascular Disease, IRB, RD) (DS-CVD-IRB-RD) (2)
    Item
    Case control status of the subject
    text
    C3274646 (UMLS CUI [1,1])
    Code List
    Case control status of the subject
    CL Item
    Control (1)
    C3274648 (UMLS CUI [1,1])
    SUBJECT_SOURCE
    Item
    Repository name for dbGaP study also containing this individual
    string
    C3847505 (UMLS CUI [1,1])
    C0027365 (UMLS CUI [1,2])
    C0008976 (UMLS CUI [1,3])
    C0332256 (UMLS CUI [1,4])
    C0237401 (UMLS CUI [1,5])
    SOURCE_SUBJECT_ID
    Item
    Subject ID used in the SUBJECT_SOURCE repository
    string
    C2348585 (UMLS CUI [1,1])
    C3847505 (UMLS CUI [1,2])
    C0449416 (UMLS CUI [1,3])

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