ID

45672

Beskrivning

Principal Investigator: Pamela Madden, PhD, Washington University, St. Louis, MS, USA MeSH: Behavior, Addictive,Substance-Related Disorders https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001299 Ascertainment: Families were ascertained through panels of adult Australian twins, and a sample of spouses of Australian twins. Families with at least one offspring who was identified as a current or former smoker in an earlier survey. Screening telephone interviews were conducted with index cases to provide confirmation of a history of heavy cigarette smoking, to obtain confirmation of a history of heavy cigarette smoking, and to obtain additional information on the history of cigarette use and the survival status of other family members, and their full siblings and parents. Index cases were the affected spouse of a twin, or the affected twin from pairs discordant for a history of heavy smoking, or a randomly chosen twin from pairs where both have a history of regular smoking (i.e., has smoked at least 100 cigarettes lifetime), and at least one live biological parent to identify sibships with at least one affected sib pair (ASP) concordant for heavy smoking, and at least one living parent. If permission was granted by the index case, eligible family members were contacted and invited to provide a blood sample and to complete a telephone diagnostic interview. In families with just one available biological parent, and additional unaffected sibling who had never smoked on a regular basis (i.e., has smoked fewer than 100 cigarette lifetime, but has experimented with cigarettes once or twice) was included (when available) to help compensate for the loss of information due to missing parental phenotypes. (Target N=400 Australian families with approximately 600 ASPs; and 600 TDT trios comprised of a nicotine dependent index case and both biological parents). *Diagnostic Assessment*: The telephone diagnostic interview assessed DSM-IV and modified DSM-IIIR diagnoses (i.e., without time clustering) for nicotine dependence, alcohol and other drug dependence and abuse, major depression, and childhood conduct disorder. Most diagnostic assessments were based on the SSAGA/SSAGA-II, developed for the multi-site gene-mapping alcoholism study (the Collaborative Study on the Genetics of Alcohol. An exception was the tobacco section, which was developed directly from the CIDI and DIS (as the original SSAGA did not include a diagnostic section on nicotine dependence). In version 2 of this study, a text file containing 7704 SNPs with large allele frequency discrepancy as compared to 1000 Genomes is included. Users have the option to exlude these 7704 SNPs.

Länk

dbGaP-study=phs001299

Nyckelord

  1. 2023-04-04 2023-04-04 - Chiara Middel
Rättsinnehavare

Pamela Madden, PhD, Washington University, St. Louis, MS, USA

Uppladdad den

4 april 2023

DOI

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Licens

Creative Commons BY 4.0

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dbGaP phs001299 Nicotine Addiction Genetics and Correlates

Eligibility Criteria

Inclusion and exclusion criteria
Beskrivning

Inclusion and exclusion criteria

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0680251
An affected full sibling pair design, with the inclusion of any additional affected full siblings in the family, both biological parents (when available), and (if one or both parents are unavailable for study) unaffected full siblings who have been exposed to nicotine (i.e., have smoked at least once or twice), but never became regular smokers (i.e., smoked fewer than 100 cigarettes in their life) to help compensate for the loss of information due to missing parental phenotypes. This design permits affected sib pair analyses and TDT (including sib-TDT) analyses.
Beskrivning

Elig.phs001299.v2.p1.1

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0522476
UMLS CUI [1,2]
C0037047
UMLS CUI [1,3]
C1709450
UMLS CUI [1,4]
C1707689
UMLS CUI [2,1]
C1512693
UMLS CUI [2,2]
C1524062
UMLS CUI [2,3]
C0522476
UMLS CUI [2,4]
C0037047
UMLS CUI [3,1]
C1512693
UMLS CUI [3,2]
C1706086
UMLS CUI [3,3]
C0337465
UMLS CUI [4,1]
C1512693
UMLS CUI [4,2]
C1524062
UMLS CUI [4,3]
C0037047
UMLS CUI [4,4]
C0522477
UMLS CUI [4,5]
C0332157
UMLS CUI [4,6]
C0543414
UMLS CUI [4,7]
C1298908
UMLS CUI [4,8]
C0205272
UMLS CUI [4,9]
C0543414
UMLS CUI [4,10]
C0205432
UMLS CUI [4,11]
C4524803
UMLS CUI [5,1]
C1707689
UMLS CUI [5,2]
C0522476
UMLS CUI [5,3]
C0037047
UMLS CUI [5,4]
C1709450
UMLS CUI [5,5]
C0936012
Australia has a large national twin panel in which smoking data were collected prospectively over a period of many years (from 1980-82 onwards). Heavy smoking cases were identified from these panels. In the case of MZ twin pairs concordant for heavy smoking, one twin, with preference given to a twin who also met criteria for nicotine dependence, was selected as the index case, and the MZ co-twin can be discarded from traditional analyses.
Beskrivning

Elig.phs001299.v2.p1.2

Datatyp

boolean

Alias
UMLS CUI [1,1]
C0004340
UMLS CUI [1,2]
C0041427
UMLS CUI [1,3]
C3846158
UMLS CUI [1,4]
C0033522
UMLS CUI [1,5]
C1516698
UMLS CUI [1,6]
C1519386
UMLS CUI [1,7]
C1511726
UMLS CUI [2,1]
C0337669
UMLS CUI [2,2]
C0600091
UMLS CUI [2,3]
C3846158
UMLS CUI [3,1]
C0041427
UMLS CUI [3,2]
C4553529
UMLS CUI [3,3]
C0337669
UMLS CUI [4,1]
C0558295
UMLS CUI [4,2]
C0041427
UMLS CUI [4,3]
C1550543
UMLS CUI [4,4]
C0243161
UMLS CUI [4,5]
C0028043
UMLS CUI [4,6]
C0242802
UMLS CUI [4,7]
C2597943
UMLS CUI [5,1]
C0205394
UMLS CUI [5,2]
C0041427
UMLS CUI [5,3]
C4699982

Similar models

Eligibility Criteria

Name
Typ
Description | Question | Decode (Coded Value)
Datatyp
Alias
Item Group
Inclusion and exclusion criteria
C1512693 (UMLS CUI [1,1])
C0680251 (UMLS CUI [1,2])
Elig.phs001299.v2.p1.1
Item
An affected full sibling pair design, with the inclusion of any additional affected full siblings in the family, both biological parents (when available), and (if one or both parents are unavailable for study) unaffected full siblings who have been exposed to nicotine (i.e., have smoked at least once or twice), but never became regular smokers (i.e., smoked fewer than 100 cigarettes in their life) to help compensate for the loss of information due to missing parental phenotypes. This design permits affected sib pair analyses and TDT (including sib-TDT) analyses.
boolean
C0522476 (UMLS CUI [1,1])
C0037047 (UMLS CUI [1,2])
C1709450 (UMLS CUI [1,3])
C1707689 (UMLS CUI [1,4])
C1512693 (UMLS CUI [2,1])
C1524062 (UMLS CUI [2,2])
C0522476 (UMLS CUI [2,3])
C0037047 (UMLS CUI [2,4])
C1512693 (UMLS CUI [3,1])
C1706086 (UMLS CUI [3,2])
C0337465 (UMLS CUI [3,3])
C1512693 (UMLS CUI [4,1])
C1524062 (UMLS CUI [4,2])
C0037047 (UMLS CUI [4,3])
C0522477 (UMLS CUI [4,4])
C0332157 (UMLS CUI [4,5])
C0543414 (UMLS CUI [4,6])
C1298908 (UMLS CUI [4,7])
C0205272 (UMLS CUI [4,8])
C0543414 (UMLS CUI [4,9])
C0205432 (UMLS CUI [4,10])
C4524803 (UMLS CUI [4,11])
C1707689 (UMLS CUI [5,1])
C0522476 (UMLS CUI [5,2])
C0037047 (UMLS CUI [5,3])
C1709450 (UMLS CUI [5,4])
C0936012 (UMLS CUI [5,5])
Elig.phs001299.v2.p1.2
Item
Australia has a large national twin panel in which smoking data were collected prospectively over a period of many years (from 1980-82 onwards). Heavy smoking cases were identified from these panels. In the case of MZ twin pairs concordant for heavy smoking, one twin, with preference given to a twin who also met criteria for nicotine dependence, was selected as the index case, and the MZ co-twin can be discarded from traditional analyses.
boolean
C0004340 (UMLS CUI [1,1])
C0041427 (UMLS CUI [1,2])
C3846158 (UMLS CUI [1,3])
C0033522 (UMLS CUI [1,4])
C1516698 (UMLS CUI [1,5])
C1519386 (UMLS CUI [1,6])
C1511726 (UMLS CUI [1,7])
C0337669 (UMLS CUI [2,1])
C0600091 (UMLS CUI [2,2])
C3846158 (UMLS CUI [2,3])
C0041427 (UMLS CUI [3,1])
C4553529 (UMLS CUI [3,2])
C0337669 (UMLS CUI [3,3])
C0558295 (UMLS CUI [4,1])
C0041427 (UMLS CUI [4,2])
C1550543 (UMLS CUI [4,3])
C0243161 (UMLS CUI [4,4])
C0028043 (UMLS CUI [4,5])
C0242802 (UMLS CUI [4,6])
C2597943 (UMLS CUI [4,7])
C0205394 (UMLS CUI [5,1])
C0041427 (UMLS CUI [5,2])
C4699982 (UMLS CUI [5,3])

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