ID

45664

Description

Principal Investigator: Katherine Nathanson, MD, University of Pennsylvania, Philadelphia, PA, USA MeSH: Testicular Germ Cell Tumor,Seminoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001307 Testicular germ cell tumors (TGCT) are the most common cancer in men ages 20-40. The incidence of TGCT has more than doubled over the past forty years, without clear etiology. Both genetic effects and environmental exposures, specifically during the pre-natal period, are likely to play an important role in determining TGCT susceptibility. TGCT is known to develop from primordial germ cells (PGCs). We hypothesize that variation in genes that impact upon the differentiation and maturation of PGCs will be important determinants of TGCT susceptibility and based on this hypothesis have selected three important pathways for study, i) male germ cell development, ii) androgen and estrogen biosynthesis and metabolism, and iii) IGF signaling. The proteins involved in early male germ cell development, normally only expressed in PGCs, are markers of and are overexpressed in TGCT. Markers of increased exposure to estrogen (or relatively decreased exposure to androgen) in utero and exogenous estrogen exposures, such as endocrine disruptors, have been associated with TGCT case status in multiple studies. IGF signaling is necessary for testis differentiation and maturation in mice and interacts synergistically with the estrogen signaling pathway. Additionally, we are interested in examining genetic factors predisposing to TGCT in an unbiased fashion, and thus will conduct a Genome Wide Association Study. As well disease susceptiblity, genetics are likely to play a role in disease progression, disease outcomes and response to treatement. We will also assess association of inherited genetics with these outcomes. We will analyze the contribution of genetic variants in these pathways to TGCT risk using a population-based case-control study in the Philadelphia metropolitian area. Our goal is the collection of 550 TGCT cases and 1100 age, race and cell phone use matched controls without a history of TGCT, which will yield 500 and 1000 white cases and controls, respectively, available for final analyses. All cases will be enumerated through the New Jersey and Pennsylvania state cancer registries. We will use a two-tiered approach for case recruitment: hospital clinic-based followed by registry-based. Hospital based cases will be identified within the Univeristy of Pennsylvania Health System and the University of Pennsylvania Cancer Network. All cases identified through this mechanism will be recruited irregardless of diagnosis date. The remaining cases will be identified through the New Jersey and Pennsylvania cancer registries and contacted following their protocols. Controls will be identified through random digit dialing and address based sampling. Both cases and controls will complete a questionnaire addressing known, presumed, and hypothesized risk factors for TGCT and provide a biospecimen. Pathological slides will be reviewed to cases to confirm diagnostic sub-type of TGCT. Haplotypes and functional SNPs will be typed in the genes of interest, as well as throughout the genome. Analyses will be conducted for specific variants, common haplotypes, alone and in conjunction with each other and exposure data after appropriate adjustment for potential confounders. The findings from this study will greatly contribute to our understanding of determinants of TGCT susceptibility.

Lien

dbGaP-study=phs001307

Mots-clés

  1. 29/03/2023 29/03/2023 - Chiara Middel
Détendeur de droits

Katherine Nathanson, MD, University of Pennsylvania, Philadelphia, PA, USA

Téléchargé le

29 mars 2023

DOI

Pour une demande vous connecter.

Licence

Creative Commons BY 4.0

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dbGaP phs001307 Inherited Genetic Variation and Predisposition to Testicular Germ Cell Tumor: UPenn Local TGCT Study

Eligibility Criteria

Inclusion and exclusion criteria
Description

Inclusion and exclusion criteria

Alias
UMLS CUI [1,1]
C1512693
UMLS CUI [1,2]
C0680251
Eligible cases will be men with a first primary TGCT, who are between 18 and 55 years of age. From the cancer registry we will recruit those who are a resident of the twelve specified counties in New Jersey and Pennsylvania at the time of diagnosis. First primary TGCT is defined as all testis primaries (C620-1, C629) with seminoma, mixed or NSGCT (ICD-O codes 9061xx -9101xx) histology. Controls will be matched to cases based on race, age and cell phone usage.
Description

Elig.phs001307.v1.p1.1

Type de données

boolean

Alias
UMLS CUI [1,1]
C1302261
UMLS CUI [1,2]
C0001779
UMLS CUI [1,3]
C0855197
UMLS CUI [2,1]
C0242800
UMLS CUI [2,2]
C0805443
UMLS CUI [2,3]
C0030705
UMLS CUI [2,4]
C0237096
UMLS CUI [2,5]
C2316983
UMLS CUI [3,1]
C0205435
UMLS CUI [3,2]
C0205225
UMLS CUI [3,3]
C0855197
UMLS CUI [3,4]
C0449695
UMLS CUI [3,5]
C0039597
UMLS CUI [3,6]
C0019638
UMLS CUI [3,7]
C0036631
UMLS CUI [3,8]
c1266158
UMLS CUI [3,9]
C0334524
UMLS CUI [4,1]
C0009932
UMLS CUI [4,2]
C1708943
UMLS CUI [4,3]
C0034510
UMLS CUI [4,4]
C1136359
UMLS CUI [4,5]
C0457083
Because Klinefelters and Down syndromes, and HIV positivity are associated with increased risk for TGCT, we will collect this information by questionnaire, and exclude cases with these conditions from analyses. Cases associated with these conditions account for an extremely small proportion of TGCT cases. We also will exclude controls reporting Klinefelters and Down syndromes, and HIV positivity from analyses.
Description

Elig.phs001307.v1.p1.2

Type de données

boolean

Alias
UMLS CUI [1,1]
C0019699
UMLS CUI [1,2]
C0022735
UMLS CUI [1,3]
C0013080
UMLS CUI [1,4]
C0332281
UMLS CUI [1,5]
C1336708
UMLS CUI [2,1]
C1516698
UMLS CUI [2,2]
C1533716
UMLS CUI [2,3]
C0034394
UMLS CUI [3,1]
C0332196
UMLS CUI [3,2]
C0868928
UMLS CUI [4,1]
C0332196
UMLS CUI [4,2]
C0009932
Children, pregnant women, fetuses, neonates, or prisoners are not included in this research study.
Description

Elig.phs001307.v1.p1.3

Type de données

boolean

Alias
UMLS CUI [1,1]
C0680251
UMLS CUI [1,2]
C0032961
UMLS CUI [1,3]
C0015965
UMLS CUI [1,4]
C0021289
UMLS CUI [1,5]
C0033167

Similar models

Eligibility Criteria

Name
Type
Description | Question | Decode (Coded Value)
Type de données
Alias
Item Group
Inclusion and exclusion criteria
C1512693 (UMLS CUI [1,1])
C0680251 (UMLS CUI [1,2])
Elig.phs001307.v1.p1.1
Item
Eligible cases will be men with a first primary TGCT, who are between 18 and 55 years of age. From the cancer registry we will recruit those who are a resident of the twelve specified counties in New Jersey and Pennsylvania at the time of diagnosis. First primary TGCT is defined as all testis primaries (C620-1, C629) with seminoma, mixed or NSGCT (ICD-O codes 9061xx -9101xx) histology. Controls will be matched to cases based on race, age and cell phone usage.
boolean
C1302261 (UMLS CUI [1,1])
C0001779 (UMLS CUI [1,2])
C0855197 (UMLS CUI [1,3])
C0242800 (UMLS CUI [2,1])
C0805443 (UMLS CUI [2,2])
C0030705 (UMLS CUI [2,3])
C0237096 (UMLS CUI [2,4])
C2316983 (UMLS CUI [2,5])
C0205435 (UMLS CUI [3,1])
C0205225 (UMLS CUI [3,2])
C0855197 (UMLS CUI [3,3])
C0449695 (UMLS CUI [3,4])
C0039597 (UMLS CUI [3,5])
C0019638 (UMLS CUI [3,6])
C0036631 (UMLS CUI [3,7])
c1266158 (UMLS CUI [3,8])
C0334524 (UMLS CUI [3,9])
C0009932 (UMLS CUI [4,1])
C1708943 (UMLS CUI [4,2])
C0034510 (UMLS CUI [4,3])
C1136359 (UMLS CUI [4,4])
C0457083 (UMLS CUI [4,5])
Elig.phs001307.v1.p1.2
Item
Because Klinefelters and Down syndromes, and HIV positivity are associated with increased risk for TGCT, we will collect this information by questionnaire, and exclude cases with these conditions from analyses. Cases associated with these conditions account for an extremely small proportion of TGCT cases. We also will exclude controls reporting Klinefelters and Down syndromes, and HIV positivity from analyses.
boolean
C0019699 (UMLS CUI [1,1])
C0022735 (UMLS CUI [1,2])
C0013080 (UMLS CUI [1,3])
C0332281 (UMLS CUI [1,4])
C1336708 (UMLS CUI [1,5])
C1516698 (UMLS CUI [2,1])
C1533716 (UMLS CUI [2,2])
C0034394 (UMLS CUI [2,3])
C0332196 (UMLS CUI [3,1])
C0868928 (UMLS CUI [3,2])
C0332196 (UMLS CUI [4,1])
C0009932 (UMLS CUI [4,2])
Elig.phs001307.v1.p1.3
Item
Children, pregnant women, fetuses, neonates, or prisoners are not included in this research study.
boolean
C0680251 (UMLS CUI [1,1])
C0032961 (UMLS CUI [1,2])
C0015965 (UMLS CUI [1,3])
C0021289 (UMLS CUI [1,4])
C0033167 (UMLS CUI [1,5])

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