0 Evaluaciones

ID

45660

Descripción

Principal Investigator: John Thomas Poirier, PhD, Memorial Sloan Kettering Cancer Center, New York, NY, USA MeSH: Lung Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001249 Genetic and epigenetic analysis of patient-derived xenograft models of acquired chemoresistance in small cell lung cancer.

Link

dbGaP study = phs001249

Palabras clave

  1. 23/3/23 23/3/23 - Simon Heim
Titular de derechos de autor

John Thomas Poirier, PhD, Memorial Sloan Kettering Cancer Center, New York, NY, USA

Subido en

23 de marzo de 2023

DOI

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Licencia

Creative Commons BY 4.0

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    dbGaP phs001249 Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts

    Sample ID, analyte type, body site, genotyping center, histological type, chemoresistance status, tumor status of sample, primary of metastatic tumor, primary tumor location, sequencing center, and treatment of participants with small cell lung tumor and involved in the "Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts" project.

    pht006177
    Descripción

    pht006177

    Alias
    UMLS CUI [1,1]
    C3846158 (Other Coding)
    LOINC
    LA4728-7
    De-identified sample ID
    Descripción

    SAMPLE_ID

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C4684638 (De-identified Information)
    UMLS CUI [1,2]
    C1299222 (Sample identification number)
    SNOMED
    372274003
    Body site where sample was collected
    Descripción

    BODY_SITE

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C0449705 (Site of sampling)
    SNOMED
    246317007
    LOINC
    MTHU008875
    Analyte type
    Descripción

    ANALYTE_TYPE

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C4744818 (Analyte Type)
    Tumor status
    Descripción

    IS_TUMOR

    Tipo de datos

    text

    Alias
    UMLS CUI [1,1]
    C0475752 (Tumor status)
    SNOMED
    277058005
    Cell or tissue type or subtype of sample
    Descripción

    HISTOLOGICAL_TYPE

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C2347026 (Biospecimen)
    UMLS CUI [1,2]
    C0007634 (Cells)
    SNOMED
    4421005
    LOINC
    LP14738-6
    UMLS CUI [1,3]
    C0332307 (Type - attribute)
    SNOMED
    261664005
    UMLS CUI [2,1]
    C2347026 (Biospecimen)
    UMLS CUI [2,2]
    C0007634 (Cells)
    SNOMED
    4421005
    LOINC
    LP14738-6
    UMLS CUI [2,3]
    C0449560 (Subtype (attribute))
    SNOMED
    260837004
    UMLS CUI [3,1]
    C1292533 (Tissue specimen)
    SNOMED
    119376003
    UMLS CUI [3,2]
    C0332307 (Type - attribute)
    SNOMED
    261664005
    UMLS CUI [4,1]
    C1292533 (Tissue specimen)
    SNOMED
    119376003
    UMLS CUI [4,2]
    C0449560 (Subtype (attribute))
    SNOMED
    260837004
    Primary tumor, metastasis, or transformed cell line
    Descripción

    PRIMARY_METASTATIC_TUMOR

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C0677930 (Primary Neoplasm)
    UMLS CUI [2,1]
    C0027627 (Neoplasm Metastasis)
    LOINC
    LP35033-7
    UMLS CUI [3,1]
    C0007601 (Cell Line, Transformed)
    Primary tumor location
    Descripción

    PRIMARY_TUMOR_LOCATION

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C0475447 (Primary tumor site)
    SNOMED
    399687005
    Name of the center which conducted genotyping
    Descripción

    GENOTYPING_CENTER

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C0027365 (Name)
    SNOMED
    703503000
    LOINC
    LP72974-6
    UMLS CUI [1,2]
    C5575037 (undefined)
    UMLS CUI [1,3]
    C1285573 (Genotype determination)
    SNOMED
    726528006
    LOINC
    LP28723-2
    Name of the center which conducted sequencing
    Descripción

    SEQUENCING_CENTER

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C0027365 (Name)
    SNOMED
    703503000
    LOINC
    LP72974-6
    UMLS CUI [1,2]
    C5575037 (undefined)
    UMLS CUI [1,3]
    C1561491 (Sequencing)
    Chemoresistance status
    Descripción

    IS_CHEMORESISTANT

    Tipo de datos

    text

    Alias
    UMLS CUI [1,1]
    C3665472 (Chemotherapy)
    SNOMED
    367336001
    LOINC
    MTHU010425
    UMLS CUI [1,2]
    C1442099 (Resis)
    LOINC
    LP6857-9
    UMLS CUI [1,3]
    C0449438 (Status)
    SNOMED
    263490005
    LOINC
    LP73412-6
    Name of treatment
    Descripción

    TREATMENT

    Tipo de datos

    string

    Alias
    UMLS CUI [1,1]
    C2826274 (Treatment Name)

    Similar models

    Sample ID, analyte type, body site, genotyping center, histological type, chemoresistance status, tumor status of sample, primary of metastatic tumor, primary tumor location, sequencing center, and treatment of participants with small cell lung tumor and involved in the "Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts" project.

    Name
    Tipo
    Description | Question | Decode (Coded Value)
    Tipo de datos
    Alias
    Item Group
    pht006177
    C3846158 (UMLS CUI [1,1])
    SAMPLE_ID
    Item
    De-identified sample ID
    string
    C4684638 (UMLS CUI [1,1])
    C1299222 (UMLS CUI [1,2])
    BODY_SITE
    Item
    Body site where sample was collected
    string
    C0449705 (UMLS CUI [1,1])
    ANALYTE_TYPE
    Item
    Analyte type
    string
    C4744818 (UMLS CUI [1,1])
    Item
    Tumor status
    text
    C0475752 (UMLS CUI [1,1])
    Code List
    Tumor status
    CL Item
    Is not a tumor (N)
    C0027651 (UMLS CUI [1,1])
    C1518422 (UMLS CUI [1,2])
    CL Item
    Is tumor (Y)
    C0027651 (UMLS CUI [1,1])
    HISTOLOGICAL_TYPE
    Item
    Cell or tissue type or subtype of sample
    string
    C2347026 (UMLS CUI [1,1])
    C0007634 (UMLS CUI [1,2])
    C0332307 (UMLS CUI [1,3])
    C2347026 (UMLS CUI [2,1])
    C0007634 (UMLS CUI [2,2])
    C0449560 (UMLS CUI [2,3])
    C1292533 (UMLS CUI [3,1])
    C0332307 (UMLS CUI [3,2])
    C1292533 (UMLS CUI [4,1])
    C0449560 (UMLS CUI [4,2])
    PRIMARY_METASTATIC_TUMOR
    Item
    Primary tumor, metastasis, or transformed cell line
    string
    C0677930 (UMLS CUI [1,1])
    C0027627 (UMLS CUI [2,1])
    C0007601 (UMLS CUI [3,1])
    PRIMARY_TUMOR_LOCATION
    Item
    Primary tumor location
    string
    C0475447 (UMLS CUI [1,1])
    GENOTYPING_CENTER
    Item
    Name of the center which conducted genotyping
    string
    C0027365 (UMLS CUI [1,1])
    C5575037 (UMLS CUI [1,2])
    C1285573 (UMLS CUI [1,3])
    SEQUENCING_CENTER
    Item
    Name of the center which conducted sequencing
    string
    C0027365 (UMLS CUI [1,1])
    C5575037 (UMLS CUI [1,2])
    C1561491 (UMLS CUI [1,3])
    Item
    Chemoresistance status
    text
    C3665472 (UMLS CUI [1,1])
    C1442099 (UMLS CUI [1,2])
    C0449438 (UMLS CUI [1,3])
    Code List
    Chemoresistance status
    CL Item
    Is not chemoresistant (N)
    CL Item
    Is chemoresistant (Y)
    TREATMENT
    Item
    Name of treatment
    string
    C2826274 (UMLS CUI [1,1])

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