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ID

45660

Description

Principal Investigator: John Thomas Poirier, PhD, Memorial Sloan Kettering Cancer Center, New York, NY, USA MeSH: Lung Neoplasms https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001249 Genetic and epigenetic analysis of patient-derived xenograft models of acquired chemoresistance in small cell lung cancer.

Link

dbGaP study = phs001249

Keywords

  1. 3/23/23 3/23/23 - Simon Heim
Copyright Holder

John Thomas Poirier, PhD, Memorial Sloan Kettering Cancer Center, New York, NY, USA

Uploaded on

March 23, 2023

DOI

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License

Creative Commons BY 4.0

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    dbGaP phs001249 Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts

    Subject ID, sample ID, sample source, source sample ID, and sample use variable obtained from participants with small cell lung tumor and involved in the "Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts" project.

    pht006176
    Description

    pht006176

    Alias
    UMLS CUI [1,1]
    C3846158 (Other Coding)
    LOINC
    LA4728-7
    Subject ID
    Description

    SUBJECT_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C2348585 (Clinical Trial Subject Unique Identifier)
    Sample ID
    Description

    SAMPLE_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C1299222 (Sample identification number)
    SNOMED
    372274003
    Source repository where samples originate
    Description

    SAMPLE_SOURCE

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C3847505 (Repository)
    LOINC
    LP182360-0
    UMLS CUI [1,2]
    C0449416 (Source)
    SNOMED
    260753009
    LOINC
    LP21212-3
    UMLS CUI [1,3]
    C2347026 (Biospecimen)
    Sample ID used in the Source Repository
    Description

    SOURCE_SAMPLE_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C1299222 (Sample identification number)
    SNOMED
    372274003
    UMLS CUI [1,2]
    C3847505 (Repository)
    LOINC
    LP182360-0
    UMLS CUI [1,3]
    C0449416 (Source)
    SNOMED
    260753009
    LOINC
    LP21212-3
    Sample Use
    Description

    SAMPLE_USE

    Data type

    text

    Alias
    UMLS CUI [1,1]
    C2347026 (Biospecimen)
    UMLS CUI [1,2]
    C1524063 (Use of)
    SNOMED
    260676000

    Similar models

    Subject ID, sample ID, sample source, source sample ID, and sample use variable obtained from participants with small cell lung tumor and involved in the "Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts" project.

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    pht006176
    C3846158 (UMLS CUI [1,1])
    SUBJECT_ID
    Item
    Subject ID
    string
    C2348585 (UMLS CUI [1,1])
    SAMPLE_ID
    Item
    Sample ID
    string
    C1299222 (UMLS CUI [1,1])
    SAMPLE_SOURCE
    Item
    Source repository where samples originate
    string
    C3847505 (UMLS CUI [1,1])
    C0449416 (UMLS CUI [1,2])
    C2347026 (UMLS CUI [1,3])
    SOURCE_SAMPLE_ID
    Item
    Sample ID used in the Source Repository
    string
    C1299222 (UMLS CUI [1,1])
    C3847505 (UMLS CUI [1,2])
    C0449416 (UMLS CUI [1,3])
    Item
    Sample Use
    text
    C2347026 (UMLS CUI [1,1])
    C1524063 (UMLS CUI [1,2])
    Code List
    Sample Use
    CL Item
    Chromatin sequencing (Seq_DNA_Chromatin)
    CL Item
    Custom targeted DNA sequencing (Seq_DNA_Target)
    CL Item
    Whole exome sequencing (Seq_DNA_WholeExome)
    C3640077 (UMLS CUI [1,1])
    CL Item
    Whole transcriptome sequencing (Seq_RNA)
    C4086963 (UMLS CUI [1,1])

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