ID
45658
Description
Principal Investigator: Neil E Caporaso, MD, National Institutes of Health, Bethesda, MD, USA MeSH: Waldenstrom Macroglobulinemia,Lymphoplasmacytoid Lymphoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001284 A discovery GWAS is performed, consisting of genotyping 221 Waldenstrom macroglobulinemia (WM) cases on the Illumina Omni Express 12v1.1 platform and analyzing the genotypes together with those of 3798 previously genotyped controls in a model taking into account gender, age, and principal components of ancestry (i.e., significant eigenvectors). Directly genotyped data are supplemented by imputation using the Haplotype Reference Consortium.
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Versions (1)
- 23/03/2023 23/03/2023 - Simon Heim
Détendeur de droits
Neil E Caporaso, MD, National Institutes of Health, Bethesda, MD, USA
Téléchargé le
23 mars 2023
DOI
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Licence
Creative Commons BY 4.0
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dbGaP phs001284 NCI Waldenstrom Macroglobulinemia Genome-wide Association Study
This subject phenotype table contains subject ID, race, sex, age at diagnosis, and population structure principal components 1 and 2.
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent file includes subject IDs, consent information, and case control status of the subject for Waldenstrom Macroglobulinemia or lymphoplasmacytic lymphoma.
- This data table contains a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
- This subject phenotype table contains subject ID, race, sex, age at diagnosis, and population structure principal components 1 and 2.
- This sample attributes table contains sample ID, histological type, body site, analyte type, and tumor status.
Similar models
This subject phenotype table contains subject ID, race, sex, age at diagnosis, and population structure principal components 1 and 2.
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent file includes subject IDs, consent information, and case control status of the subject for Waldenstrom Macroglobulinemia or lymphoplasmacytic lymphoma.
- This data table contains a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample use.
- This subject phenotype table contains subject ID, race, sex, age at diagnosis, and population structure principal components 1 and 2.
- This sample attributes table contains sample ID, histological type, body site, analyte type, and tumor status.
C2348585 (UMLS CUI [1,2])
C1882460 (UMLS CUI [1,2])
C3274646 (UMLS CUI [1,3])
C0009932 (UMLS CUI [1,4])
C1882460 (UMLS CUI [1,2])
C3274646 (UMLS CUI [1,3])
C0009932 (UMLS CUI [1,4])