ID

45641

Descrizione

Principal Investigator: Irene M. Ghobrial, Dana Farber Cancer Institute, Boston, MA, USA MeSH: Multiple Myeloma,Monoclonal Gammopathy of Undetermined Significance https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001323 Multiple Myeloma (MM) is a plasma cell dyscrasia characterized by bone marrow (BM) infiltration and lytic bone lesions. Recent studies of massive parallel sequencing of tumor cells obtained from the BM of patients with MM have demonstrated significant clonal heterogeneity in MM. Despite this remarkable clonal heterogeneity, it could be envisioned that such clonal diversity may be even higher since single BM samples only represent a small fraction of the whole BM compartment, and the pattern of BM infiltration in MM is typically patchy. In addition, BM biopsies are painful and cannot be repeated multiple times during the course of therapy, indicating a need for less invasive methods to molecularly characterize MM patients and monitor disease progression during the therapy. Thus, optimal characterization of circulating tumor cells (CTCs) may represent a non-invasive method to capture relevant mutations present in PC clones. In addition, MM almost always progresses from precursor states of monoclonal gammopathy of undetermined significance (MGUS)/smoldering multiple myeloma (SMM) to overt MM. However, some patients rapidly progress from MGUS/SMM to overt MM (progressors) with a rate of progression of up to 70% over 5 years, while others remain indolent with minimal progression over the same time period (non-progressors). Although many patients are diagnosed with earlier phases of disease, most patients do not receive treatment until their disease progresses, at which time they have overt end-organ damage. This concept of initiating therapy at the time of symptomatic disease is analogous to initiating therapy in patients with solid tumors only after the development of measurable metastatic disease. It is therefore not surprising that cure is not achieved for most patients with MM. Interestingly, studies have demonstrated that MGUS/SMM clones may already harbor chromosomal alterations (Ig loci or hyperdiploidy) and that progression to MM is mainly due to expansion of clones that were already present in the early stages of MGUS/SMM. However, the biological factors that discriminate progressors from non-progressors in MGUS/SMM are not well known. Therefore, our overarching hypothesis is that an effective therapeutic intervention will result from defining genomic and transcriptomic markers that are associated with disease progression. We believe, therefore, that focused research studies that define molecular mechanisms of clonal evolution in MGUS/SMM/MM will identify novel biomarkers of disease progression and help develop therapeutic agents that prevent or delay progression from MGUS to overt MM. Indeed, by eradicating the disease at the precursor stages, MM may become a preventable disease. Recently, a new term called Clonal Hematopoiesis of Indeterminate Potential (CHIP) has been proposed to describe asymptomatic individuals with hematologic malignancy-associated somatic mutations. Those individuals do not fulfill any diagnostic criteria for any hematological malignancy yet they have a tendency to progress into myelodysplastic syndrome (MDS) or myeloid or lymphoid neoplasia at a rate of around 0.5-1% per year, similar to MGUS. The frequency of CHIP and role of HSCs mutations in enhancing acquisition of somatic mutations in MM plasma cells, allowing progression following treatment, has not been studied. Investigating the dysregulated pathways in early progenitor cells would allow us to understand the reasons of progression and establish novel therapeutic and potentially preventive strategies. This study dissects genomic and transcriptomic characteristics of clonal evolution from MGUS/SMM to MM as well as the characteristics of the tumor microenvironment/immune cells/peripheral blood. Our hypothesis is that molecular biomarkers will be strong predictors of progression from MGUS/SMM to MM and will allow for the development of novel therapeutic agents that prevent or delay this progression. We aim to define genomic and transcriptomic markers that lead to progression from MGUS/SMM to MM in tumor cells, blood biopsies (cell free DNA and circulating tumor cells), and the tumor microenvironment.

collegamento

dbGaP-study=phs001323

Keywords

  1. 13/03/23 13/03/23 - Chiara Middel
Titolare del copyright

Irene M. Ghobrial, Dana Farber Cancer Institute, Boston, MA, USA

Caricato su

13 marzo 2023

DOI

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Licenza

Creative Commons BY 4.0

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dbGaP phs001323 Multiple Myeloma Genomic Study (MMGS)

This sample attributes table includes body site where sample was collected, analyte type, histological type, tumor status, tumor stage of sample, and age of individual when sample was taken.

pht010117
Descrizione

pht010117

Alias
UMLS CUI [1,1]
C3846158
Sample ID
Descrizione

SAMPLE_ID

Tipo di dati

string

Alias
UMLS CUI [1,1]
C1299222
Tumor stage of sample
Descrizione

DISEASE_STAGE

Tipo di dati

text

Alias
UMLS CUI [1,1]
C1300072
Age of individual when sample was taken
Descrizione

AGE

Tipo di dati

text

Unità di misura
  • years
Alias
UMLS CUI [1,1]
C0001779
UMLS CUI [1,2]
C0011008
UMLS CUI [1,3]
C0200345
The collection site of the sample
Descrizione

BODY_SITE

Tipo di dati

text

Alias
UMLS CUI [1,1]
C0449705
The analyte type of the sample
Descrizione

ANALYTE_TYPE

Tipo di dati

string

Alias
UMLS CUI [1,1]
C4744818
The tissue type of the sample
Descrizione

HISTOLOGICAL_TYPE

Tipo di dati

string

Alias
UMLS CUI [1,1]
C2713035
The tumor status of the sample
Descrizione

IS_TUMOR

Tipo di dati

text

Alias
UMLS CUI [1,1]
C0475752

Similar models

This sample attributes table includes body site where sample was collected, analyte type, histological type, tumor status, tumor stage of sample, and age of individual when sample was taken.

Name
genere
Description | Question | Decode (Coded Value)
Tipo di dati
Alias
Item Group
pht010117
C3846158 (UMLS CUI [1,1])
SAMPLE_ID
Item
Sample ID
string
C1299222 (UMLS CUI [1,1])
Item
Tumor stage of sample
text
C1300072 (UMLS CUI [1,1])
Code List
Tumor stage of sample
CL Item
Monoclonal Gammopathy of Undetermined Significance (MGUS)
CL Item
Multiple Myeloma (MM)
CL Item
Normal Bone Marrow (NBM)
CL Item
Smoldering Multiple Myeloma high-risk (SMMh)
CL Item
Smoldering Multiple Myeloma low-risk (SMMl)
Item
Age of individual when sample was taken
text
C0001779 (UMLS CUI [1,1])
C0011008 (UMLS CUI [1,2])
C0200345 (UMLS CUI [1,3])
Code List
Age of individual when sample was taken
CL Item
Not assessed (1000)
CL Item
Missing (9999)
Item
The collection site of the sample
text
C0449705 (UMLS CUI [1,1])
Code List
The collection site of the sample
CL Item
Bone Marrow (BM)
CL Item
Peripheral Blood (PB)
CL Item
Peripheral Blooc Mononuclear Cell (PBMC)
ANALYTE_TYPE
Item
The analyte type of the sample
string
C4744818 (UMLS CUI [1,1])
HISTOLOGICAL_TYPE
Item
The tissue type of the sample
string
C2713035 (UMLS CUI [1,1])
Item
The tumor status of the sample
text
C0475752 (UMLS CUI [1,1])
Code List
The tumor status of the sample
CL Item
yes (1)
CL Item
no (2)

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