ID
45632
Description
Principal Investigator: Peter Schmidt, MD, National Institutes of Health, Bethesda, MD, USA MeSH: Premenstrual Dysphoric Disorder https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001344 In this study, lymphoblastoid cell line cultures (LCLs) from women with premenstrual dysphoric disorder (PMDD) and asymptomatic controls were compared via whole-transcriptome sequencing (RNA-seq) during untreated (ovarian steroid-free) conditions and after estradiol and progesterone treatment. In untreated LCLs, pathway analysis of the LCL transcriptome revealed, among others, over-expression of ESC/E(Z) complex genes (an ovarian steroid-regulated gene silencing complex) with significant overexpression of MTF2, PHF19, and SIRT1 (P0.05) in cells from women with PMDD compared with controls. Finally, mRNA expression of several ESC/E(Z) complex genes were increased by progesterone in controls only, and decreased by estradiol in PMDD LCLs.
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Keywords
Versions (1)
- 3/6/23 3/6/23 - Simon Heim
Copyright Holder
Peter Schmidt, MD, National Institutes of Health, Bethesda, MD, USA
Uploaded on
March 6, 2023
DOI
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License
Creative Commons BY 4.0
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dbGaP phs001344 GnRH Agonist-Induced Ovarian Suppression and Ovarian Steroids in PMDD and Controls
Eligibility Criteria
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent file includes subject IDs, consent information, and subject aliases.
- This data table contains a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample aliases and sample use.
- This subject phenotype table contains subject IDs, affection status of the subject for premenstrual dysphoric disorder, race, and gender.
- This sample attributes table contains sample IDs, body site where sample was collected, analyte type, name of the center which conducted sequencing, and treatments to the cell lines.
Similar models
Eligibility Criteria
- StudyEvent: SEV1
- Eligibility Criteria
- The subject consent file includes subject IDs, consent information, and subject aliases.
- This data table contains a mapping of study subject IDs to sample IDs. Samples are the final preps submitted for genotyping, sequencing, and/or expression data. For example, if one patient (subject ID) gave one sample, and that sample was processed differently to generate 2 sequencing runs, there would be two rows, both using the same subject ID, but having 2 unique sample IDs. The data table also includes sample aliases and sample use.
- This subject phenotype table contains subject IDs, affection status of the subject for premenstrual dysphoric disorder, race, and gender.
- This sample attributes table contains sample IDs, body site where sample was collected, analyte type, name of the center which conducted sequencing, and treatments to the cell lines.
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