0 Beoordelingen

ID

45586

Beschrijving

Principal Investigator: Richard M. Weinshilboum, MD, Mayo Clinic, Rochester, MN, USA MeSH: Major Depressive Disorder https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000670 This pharmacogenomic study focused on the response of patients with MDD to an 8-week course of treatment with citalopram or escitalopram. Briefly, clinical assessments and research assessments were performed at each study visit as summarized in Table 1. Many patients continued on antidepressant medication after the 8 week study. *Table 1*: Study timeline and patient contacts. table border="1" tr thWeek/th thConsent/Med Hx/th thWrite Rx/th thSI Qx/th thSCID/th thHRS-D17/th thQIDSC16/th thCGI-I/th /tr tr td0/td tdSC/td tdRC/td tdRC/td tdSC/td tdSC/td tdSC/td td/td /tr tr td4/td td/td tdRC/td tdRC/td td/td tdSC/td tdSC/td tdRC/td /tr tr td8/td td/td tdRC/td tdRC/td td/td tdSC/td tdSC/td tdRC/td /tr /table HRS-D17=Hamilton Rating Scale for Depression, QIDS-C16=Quick Inventory of Depressive Symptomatology, CGI-I=Clinical Global Impression-Improvement, SCID=Structured Clinical Interview for DSM-IV, SC=Study Coordinator, RC=Research Clinician. **Enrollment and baseline assessment.** Upon initial intake, the Study Coordinator (SC) obtained informed consent as well as clinical and demographic information, including history of bone marrow or liver transplant or blood transfusion within the previous 6 weeks, and prior history of treatment during the current major depressive episode. The SC completed the Structured Clinical Interview for DSM-IV (SCID), the HRS-D17 (17-item Hamilton Rating Scale for Depression) and the QIDS-C16 (Quick Inventory of Depressive Symptomatology) and reviewed the inclusion/exclusion criteria. After review with the Research Clinician (RC) and when appropriate, after a negative pregnancy test, the SC invited the subject to participate in the study if entry criteria were met. If the subject agreed, he/she received treatment according to the study protocol. **Treatment schedule.** Participants selected for inclusion in the study were seen at weeks 0, 4, and 8. The appropriate treatment antidepressant (citalopram or escitalopram) was determined following discussion between the patient and RC concerning medical, financial, and insurance considerations. The study medication citalopram was given in tablet or liquid form, depending on the patient's need. A fixed-flexible dose schedule was employed with the possibility of a dose escalation. In particular, the initial dose of citalopram was 20 mg and escitalopram was 10 mg. This dose was increased to 40 mg and 20 mg, respectively, after 4 weeks if the subject had a score of /= 6 on the QIDS-C16 and the RC concluded that the subject could tolerate the increase. If necessary, dose was reduced at the discretion of the RC. The importance of medication compliance was discussed with the subject, and subjects were asked to bring in the medication at each visit for the purpose of counting remaining pills to assess compliance. Participants may have had an abbreviated course of therapy if they were clearly intolerant of the drug or failed to respond to a 40 mg dose of citalopram or a 20 mg dose of escitalopram. They then received standard treatment from a primary physician or psychiatrist with different medications and/or therapeutic modalities (e.g. psychotherapy). Special attention was given to subjects with suicidal ideation. Those subjects were offered additional appointments as needed to ensure their safety. Participants were also contacted by telephone at week 1 and week 2 by the Clinical Nurse Specialist (CNS) or other study personnel to ensure medication compliance and patient safety. The CNS was supervised by the study psychiatrist and principal investigator and deferred to the physician's judgment as needed. The SC was trained to notify the RC at the time of the clinical visits or the phone interviews if the subject endorsed any suicidal ideation or plans. For those subjects who were unable to attend the follow-up visits as scheduled, the patient was contacted by phone to complete the HRS-D17/QIDS-C16. The participant was also asked to return to the clinic to complete a final blood draw for the study. **Adjunctive and concurrent medications.** Adjunctive treatments were those used to manage transient associated symptoms (e.g., insomnia) or transient or longer-term medication side effects (e.g., sexual dysfunction). Adjunctive treatments that were not used to treat depression were allowed during the study. However, drugs in the exclusion criteria for this study were not used as adjunctive therapies. Subjects were allowed to participate in the study while receiving concurrent medications for general medical conditions as long as there was no contraindication to use while taking citalopram or escitalopram. **Drug efficacy phenotype evaluation.** The change in QIDS-C16 score and change in HRS-D17 score were used as the major research outcome measures to assess drug response. At each clinical research visit, the RC also completed the Clinician Global Impression of Improvement (CGI-I) scale. For the primary genome-wide association analyses, dichotomous outcome variables, remission and response, were defined based on the QIDS-C16 last visit score. Remission was defined as a QIDS-C16 score of 5 or less, while response was defined as at least a 50% reduction in the QIDS-C16 score from baseline. **Specimen collection.** Specimen collections were obtained by the General Clinical Research Center (GCRC) at St. Mary's Hospital (SMH). Subjects had blood drawn on an outpatient basis at GCRC-SMH on three separate occasions - baseline (0), week 4 and week 8 visits. Prior to sample collection, date and time of last dose of study medication was gathered at the 4 and 8 week visits. For those patients who were unable to complete the regularly scheduled visits, a dismissal blood draw was requested. GCRC then shipped samples to Mayo Clinic's Biospecimens Accessioning and Processing Lab. **Genotyping and biomarker assays.** DNA from 529 patients was genotyped by the RIKEN Center for Genomic Medicine (Yokohama, Japan) using Illumina Human610-Quad BeadChips (Illumina, San Diego, CA). The study also included the determination of plasma drug levels at weeks 4 and 8, and metabolite levels at baseline and weeks 4 and 8 for a subset of subjects. The primary genome-wide association study based on these data, which includes a summary of the protocol, subject description, selection of subjects for genetic analyses, and definitions of clinical outcomes, was published in the Pharmacogenomics Journal (Ji et al., 2012).

Link

dbGaP study = phs000670

Trefwoorden

  1. 31-01-23 31-01-23 - Simon Heim
Houder van rechten

Richard M. Weinshilboum, MD, Mayo Clinic, Rochester, MN, USA

Geüploaded op

31 januari 2023

DOI

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Licentie

Creative Commons BY 4.0

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    dbGaP phs000670 PGRN Antidepressant Medication Pharmacogenomic Study (AMPS)

    The dataset includes data obtained with the HRSD and QIDS questionnaires at baseline and following 4- or 8-weeks of medication with citalopram or escitalopram, in addition to height/weight measures, and general socio-demographic information. Data of drug efficacy, remission/response to medication, and compliance with the medication protocol (subjects excluded when non-compliant) are included as well.

    pht003556
    Beschrijving

    pht003556

    Alias
    UMLS CUI [1,1]
    C3846158
    De-identified Subject ID
    Beschrijving

    SUBJID

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4684638
    UMLS CUI [1,2]
    C2348585
    Race description
    Beschrijving

    lookup.race

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C0034510
    Race code
    Beschrijving

    race

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C0034510
    Gender
    Beschrijving

    gender

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C0079399
    Age at Consent
    Beschrijving

    age

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0001779
    UMLS CUI [1,2]
    C0021430
    QIDSC (Quick Inventory of Depressive Symptomatology) total score at Baseline
    Beschrijving

    qidsctotal.b

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C2964552
    UMLS CUI [1,3]
    C1442488
    HRSD (Hamilton Rating Scale for Depression) total score at Baseline
    Beschrijving

    hrsdtotal.b

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0451203
    UMLS CUI [1,2]
    C2964552
    UMLS CUI [1,3]
    C1442488
    QIDSC total score at Week 4
    Beschrijving

    qidsctotal.w4

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C2964552
    UMLS CUI [1,3]
    C0439230
    QIDSC remission status at Week 4 (Remitter if QIDSCTotal_W4 < =5, Non Remitter if QIDSCTotal_W4 > 5)
    Beschrijving

    remissionqids.w4

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C0544452
    UMLS CUI [1,3]
    C0439230
    (([QIDSCTotal_W4]-[QIDSCTotal_B])/[QIDSCTotal_B]*100)
    Beschrijving

    qidscpctchange.w4

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C0439810
    Responder if QIDSCpctChange_W4 > = 50 , Non Responder if QIDSCpctChange_W4 < 50
    Beschrijving

    qids.response2.w4

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C1704632
    QIDSC total score at Week8
    Beschrijving

    qidsctotal.w8

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C2964552
    UMLS CUI [1,3]
    C0439230
    QIDSC remission status at Week 8 (Remitter if QIDSCTotal_W8 < =5, Non Remitter if QIDSCTotal_W8 > 5)
    Beschrijving

    remissionqids.w8

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C0544452
    UMLS CUI [1,3]
    C0439230
    (([QIDSCTotal_W8]-[QIDSCTotal_B])/[QIDSCTotal_B]*100)
    Beschrijving

    qidscpctchange.w8

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C0439810
    Responder if QIDSCpctChange_W8 >= 50 , Non Responder if QIDSCpctChange_W8 < 50
    Beschrijving

    qids.response2.w8

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C1704632
    Medication at Baseline (citalopram/escitalopram)
    Beschrijving

    med.b

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C0013227
    UMLS CUI [1,2]
    C1442488
    UMLS CUI [1,3]
    C0008845
    UMLS CUI [1,4]
    C1099456
    Dose of med.b drug prescribed at Baseline
    Beschrijving

    dose.b

    Datatype

    float

    Maateenheden
    • mg
    Alias
    UMLS CUI [1,1]
    C0678766
    UMLS CUI [1,2]
    C3166216
    UMLS CUI [1,3]
    C1442488
    mg
    Dose of drug (citalopram/escitalopram) subject is taking on their Week 4 visit
    Beschrijving

    dose.w4

    Datatype

    float

    Maateenheden
    • mg
    Alias
    UMLS CUI [1,1]
    C0678766
    UMLS CUI [1,2]
    C1099456
    UMLS CUI [1,3]
    C0008845
    UMLS CUI [1,4]
    C0439230
    mg
    Dose of drug (citalopram/escitalopram) subject is taking on their Week 8 visit
    Beschrijving

    dose.w8

    Datatype

    float

    Maateenheden
    • mg
    Alias
    UMLS CUI [1,1]
    C0678766
    UMLS CUI [1,2]
    C0008845
    UMLS CUI [1,3]
    C1099456
    UMLS CUI [1,4]
    C0439230
    mg
    Baseline Height
    Beschrijving

    height

    Datatype

    float

    Maateenheden
    • cm
    Alias
    UMLS CUI [1,1]
    C1442488
    UMLS CUI [1,2]
    C0005890
    cm
    Baseline Weight
    Beschrijving

    weight

    Datatype

    float

    Maateenheden
    • kg
    Alias
    UMLS CUI [1,1]
    C1442488
    UMLS CUI [1,2]
    C0005910
    kg
    Marital status
    Beschrijving

    maritalstatus

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C0024819
    Indicator of whether subject lives with spouse
    Beschrijving

    livewithspouse

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C2184147
    Total number of years completed
    Beschrijving

    yearsschool

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4288115
    UMLS CUI [1,2]
    C0439234
    UMLS CUI [1,3]
    C1556116
    Highest degree completed
    Beschrijving

    highdegree

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4264309
    Is subject currently in school
    Beschrijving

    currentstudent

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C2136038
    Current employment status
    Beschrijving

    currentempstat

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0242271
    Age at onset of first major depressive episode
    Beschrijving

    ageonset

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0206132
    UMLS CUI [1,2]
    C0024517
    UMLS CUI [1,3]
    C0205435
    Is there a seasonal pattern to your depression
    Beschrijving

    seasonalpattern

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0085159
    UMLS CUI [1,2]
    C0011570
    Are you currently involved in psychotherapy
    Beschrijving

    psychotherapy

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0033968
    UMLS CUI [1,2]
    C0521116
    Last visit remission defined as Remitter if last visit QIDS C <= 5, Non Remitter if last visit QIDSC > 5. If no W4 or W8 data then remission defined as Non Remitter.
    Beschrijving

    remission

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C0544452
    UMLS CUI [1,3]
    C0545082
    Last-visit response defined as Responder if QIDSCpctChange >=50 , Non Responder if QIDSCpctChange < 50. If no W4 or W8 data then response defined as Non Responder
    Beschrijving

    response

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C0545082
    UMLS CUI [1,3]
    C1704632
    Difference between final visit QIDSC and baseline QIDSC, divided by baseline QIDSC and multiplied by 100. If no W4 or W8 data then change set to 0.
    Beschrijving

    qidscpctchange

    Datatype

    float

    Alias
    UMLS CUI [1,1]
    C4720917
    UMLS CUI [1,2]
    C1705241
    UMLS CUI [1,3]
    C5204638
    UMLS CUI [1,4]
    C5204632
    Indicator of whether subject was excluded from GWAS
    Beschrijving

    IsExcluded

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C2350277
    UMLS CUI [1,2]
    C2828389
    Non-Caucasian = Subject deemed non caucasian based on self-reported race and Structure Analyses Non-Compliant = Subject was deemed non compliant
    Beschrijving

    ExclusionReason

    Datatype

    string

    Alias
    UMLS CUI [1,1]
    C0034510
    UMLS CUI [1,2]
    C1518422
    UMLS CUI [1,3]
    C0007457
    UMLS CUI [1,4]
    C2700446
    UMLS CUI [1,5]
    C0936012
    UMLS CUI [1,6]
    C0457432
    Month subject consented to study
    Beschrijving

    consentMonth

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C2711213
    UMLS CUI [1,2]
    C0439231
    Year subject consented to study
    Beschrijving

    consentYear

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C2711213
    UMLS CUI [1,2]
    C0439234
    Month of onset for current major depression episode
    Beschrijving

    currentonsetMonth

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0439231
    UMLS CUI [1,2]
    C0332162
    UMLS CUI [1,3]
    C0521116
    UMLS CUI [1,4]
    C0024517
    Year of onset for current major depression episode
    Beschrijving

    currentonsetYear

    Datatype

    text

    Alias
    UMLS CUI [1,1]
    C0439234
    UMLS CUI [1,2]
    C0332162
    UMLS CUI [1,3]
    C0521116
    UMLS CUI [1,4]
    C0024517
    1st eigenvector from principal components analysis used as a covariate in adjusted GWAS
    Beschrijving

    EVEC.1

    Datatype

    float

    Alias
    UMLS CUI [1,1]
    C3846158
    UMLS CUI [1,2]
    C0429865
    UMLS CUI [1,3]
    C4684740
    UMLS CUI [1,4]
    C2350277
    2nd eigenvector from principal components analysis used as a covariate in adjusted GWAS
    Beschrijving

    EVEC.2

    Datatype

    float

    Alias
    UMLS CUI [1,1]
    C3846158
    UMLS CUI [1,2]
    C0429865
    UMLS CUI [1,3]
    C4684740
    UMLS CUI [1,4]
    C2350277
    3rd eigenvector from principal components analysis used as a covariate in adjusted GWAS
    Beschrijving

    EVEC.3

    Datatype

    float

    Alias
    UMLS CUI [1,1]
    C3846158
    UMLS CUI [1,2]
    C0429865
    UMLS CUI [1,3]
    C4684740
    UMLS CUI [1,4]
    C2350277
    4th eigenvector from principal components analysis used as a covariate in adjusted GWAS
    Beschrijving

    EVEC.4

    Datatype

    float

    Alias
    UMLS CUI [1,1]
    C3846158
    UMLS CUI [1,2]
    C0429865
    UMLS CUI [1,3]
    C4684740
    UMLS CUI [1,4]
    C2350277

    Similar models

    The dataset includes data obtained with the HRSD and QIDS questionnaires at baseline and following 4- or 8-weeks of medication with citalopram or escitalopram, in addition to height/weight measures, and general socio-demographic information. Data of drug efficacy, remission/response to medication, and compliance with the medication protocol (subjects excluded when non-compliant) are included as well.

    Name
    Type
    Description | Question | Decode (Coded Value)
    Datatype
    Alias
    Item Group
    pht003556
    C3846158 (UMLS CUI [1,1])
    SUBJID
    Item
    De-identified Subject ID
    text
    C4684638 (UMLS CUI [1,1])
    C2348585 (UMLS CUI [1,2])
    lookup.race
    Item
    Race description
    string
    C0034510 (UMLS CUI [1,1])
    race
    Item
    Race code
    string
    C0034510 (UMLS CUI [1,1])
    gender
    Item
    Gender
    string
    C0079399 (UMLS CUI [1,1])
    age
    Item
    Age at Consent
    text
    C0001779 (UMLS CUI [1,1])
    C0021430 (UMLS CUI [1,2])
    qidsctotal.b
    Item
    QIDSC (Quick Inventory of Depressive Symptomatology) total score at Baseline
    text
    C4720917 (UMLS CUI [1,1])
    C2964552 (UMLS CUI [1,2])
    C1442488 (UMLS CUI [1,3])
    hrsdtotal.b
    Item
    HRSD (Hamilton Rating Scale for Depression) total score at Baseline
    text
    C0451203 (UMLS CUI [1,1])
    C2964552 (UMLS CUI [1,2])
    C1442488 (UMLS CUI [1,3])
    qidsctotal.w4
    Item
    QIDSC total score at Week 4
    text
    C4720917 (UMLS CUI [1,1])
    C2964552 (UMLS CUI [1,2])
    C0439230 (UMLS CUI [1,3])
    remissionqids.w4
    Item
    QIDSC remission status at Week 4 (Remitter if QIDSCTotal_W4 < =5, Non Remitter if QIDSCTotal_W4 > 5)
    string
    C4720917 (UMLS CUI [1,1])
    C0544452 (UMLS CUI [1,2])
    C0439230 (UMLS CUI [1,3])
    qidscpctchange.w4
    Item
    (([QIDSCTotal_W4]-[QIDSCTotal_B])/[QIDSCTotal_B]*100)
    text
    C4720917 (UMLS CUI [1,1])
    C0439810 (UMLS CUI [1,2])
    qids.response2.w4
    Item
    Responder if QIDSCpctChange_W4 > = 50 , Non Responder if QIDSCpctChange_W4 < 50
    string
    C4720917 (UMLS CUI [1,1])
    C1704632 (UMLS CUI [1,2])
    qidsctotal.w8
    Item
    QIDSC total score at Week8
    text
    C4720917 (UMLS CUI [1,1])
    C2964552 (UMLS CUI [1,2])
    C0439230 (UMLS CUI [1,3])
    remissionqids.w8
    Item
    QIDSC remission status at Week 8 (Remitter if QIDSCTotal_W8 < =5, Non Remitter if QIDSCTotal_W8 > 5)
    string
    C4720917 (UMLS CUI [1,1])
    C0544452 (UMLS CUI [1,2])
    C0439230 (UMLS CUI [1,3])
    qidscpctchange.w8
    Item
    (([QIDSCTotal_W8]-[QIDSCTotal_B])/[QIDSCTotal_B]*100)
    text
    C4720917 (UMLS CUI [1,1])
    C0439810 (UMLS CUI [1,2])
    qids.response2.w8
    Item
    Responder if QIDSCpctChange_W8 >= 50 , Non Responder if QIDSCpctChange_W8 < 50
    string
    C4720917 (UMLS CUI [1,1])
    C1704632 (UMLS CUI [1,2])
    med.b
    Item
    Medication at Baseline (citalopram/escitalopram)
    string
    C0013227 (UMLS CUI [1,1])
    C1442488 (UMLS CUI [1,2])
    C0008845 (UMLS CUI [1,3])
    C1099456 (UMLS CUI [1,4])
    dose.b
    Item
    Dose of med.b drug prescribed at Baseline
    float
    C0678766 (UMLS CUI [1,1])
    C3166216 (UMLS CUI [1,2])
    C1442488 (UMLS CUI [1,3])
    dose.w4
    Item
    Dose of drug (citalopram/escitalopram) subject is taking on their Week 4 visit
    float
    C0678766 (UMLS CUI [1,1])
    C1099456 (UMLS CUI [1,2])
    C0008845 (UMLS CUI [1,3])
    C0439230 (UMLS CUI [1,4])
    dose.w8
    Item
    Dose of drug (citalopram/escitalopram) subject is taking on their Week 8 visit
    float
    C0678766 (UMLS CUI [1,1])
    C0008845 (UMLS CUI [1,2])
    C1099456 (UMLS CUI [1,3])
    C0439230 (UMLS CUI [1,4])
    height
    Item
    Baseline Height
    float
    C1442488 (UMLS CUI [1,1])
    C0005890 (UMLS CUI [1,2])
    weight
    Item
    Baseline Weight
    float
    C1442488 (UMLS CUI [1,1])
    C0005910 (UMLS CUI [1,2])
    maritalstatus
    Item
    Marital status
    string
    C0024819 (UMLS CUI [1,1])
    Item
    Indicator of whether subject lives with spouse
    text
    C2184147 (UMLS CUI [1,1])
    Code List
    Indicator of whether subject lives with spouse
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    yearsschool
    Item
    Total number of years completed
    text
    C4288115 (UMLS CUI [1,1])
    C0439234 (UMLS CUI [1,2])
    C1556116 (UMLS CUI [1,3])
    Item
    Highest degree completed
    text
    C4264309 (UMLS CUI [1,1])
    Code List
    Highest degree completed
    CL Item
    None (1)
    CL Item
    GED (2)
    CL Item
    High School Diploma (3)
    CL Item
    Some College (4)
    CL Item
    Associates Degree/Technical Degree (5)
    CL Item
    College Diploma (6)
    CL Item
    Masters Degree (7)
    CL Item
    Doctorate or Professional Degree (e.g. MD, PhD, JD) (8)
    Item
    Is subject currently in school
    text
    C2136038 (UMLS CUI [1,1])
    Code List
    Is subject currently in school
    CL Item
    No (1)
    CL Item
    Full-time (2)
    CL Item
    Part-time (3)
    Item
    Current employment status
    text
    C0242271 (UMLS CUI [1,1])
    Code List
    Current employment status
    CL Item
    Unemployed,not looking (1)
    CL Item
    Unemployed, looking (2)
    CL Item
    Full-time employed (3)
    CL Item
    Part-time employed (4)
    CL Item
    Self-employed (5)
    CL Item
    Retired not working (6)
    ageonset
    Item
    Age at onset of first major depressive episode
    text
    C0206132 (UMLS CUI [1,1])
    C0024517 (UMLS CUI [1,2])
    C0205435 (UMLS CUI [1,3])
    Item
    Is there a seasonal pattern to your depression
    text
    C0085159 (UMLS CUI [1,1])
    C0011570 (UMLS CUI [1,2])
    Code List
    Is there a seasonal pattern to your depression
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    Item
    Are you currently involved in psychotherapy
    text
    C0033968 (UMLS CUI [1,1])
    C0521116 (UMLS CUI [1,2])
    Code List
    Are you currently involved in psychotherapy
    CL Item
    Yes (1)
    CL Item
    No (2)
    CL Item
    Unknown (3)
    remission
    Item
    Last visit remission defined as Remitter if last visit QIDS C <= 5, Non Remitter if last visit QIDSC > 5. If no W4 or W8 data then remission defined as Non Remitter.
    string
    C4720917 (UMLS CUI [1,1])
    C0544452 (UMLS CUI [1,2])
    C0545082 (UMLS CUI [1,3])
    Item
    Last-visit response defined as Responder if QIDSCpctChange >=50 , Non Responder if QIDSCpctChange < 50. If no W4 or W8 data then response defined as Non Responder
    text
    C4720917 (UMLS CUI [1,1])
    C0545082 (UMLS CUI [1,2])
    C1704632 (UMLS CUI [1,3])
    Code List
    Last-visit response defined as Responder if QIDSCpctChange >=50 , Non Responder if QIDSCpctChange < 50. If no W4 or W8 data then response defined as Non Responder
    CL Item
    Non-Responder (Non-Responder)
    CL Item
    Responder (Responder)
    qidscpctchange
    Item
    Difference between final visit QIDSC and baseline QIDSC, divided by baseline QIDSC and multiplied by 100. If no W4 or W8 data then change set to 0.
    float
    C4720917 (UMLS CUI [1,1])
    C1705241 (UMLS CUI [1,2])
    C5204638 (UMLS CUI [1,3])
    C5204632 (UMLS CUI [1,4])
    IsExcluded
    Item
    Indicator of whether subject was excluded from GWAS
    string
    C2350277 (UMLS CUI [1,1])
    C2828389 (UMLS CUI [1,2])
    ExclusionReason
    Item
    Non-Caucasian = Subject deemed non caucasian based on self-reported race and Structure Analyses Non-Compliant = Subject was deemed non compliant
    string
    C0034510 (UMLS CUI [1,1])
    C1518422 (UMLS CUI [1,2])
    C0007457 (UMLS CUI [1,3])
    C2700446 (UMLS CUI [1,4])
    C0936012 (UMLS CUI [1,5])
    C0457432 (UMLS CUI [1,6])
    consentMonth
    Item
    Month subject consented to study
    text
    C2711213 (UMLS CUI [1,1])
    C0439231 (UMLS CUI [1,2])
    consentYear
    Item
    Year subject consented to study
    text
    C2711213 (UMLS CUI [1,1])
    C0439234 (UMLS CUI [1,2])
    currentonsetMonth
    Item
    Month of onset for current major depression episode
    text
    C0439231 (UMLS CUI [1,1])
    C0332162 (UMLS CUI [1,2])
    C0521116 (UMLS CUI [1,3])
    C0024517 (UMLS CUI [1,4])
    currentonsetYear
    Item
    Year of onset for current major depression episode
    text
    C0439234 (UMLS CUI [1,1])
    C0332162 (UMLS CUI [1,2])
    C0521116 (UMLS CUI [1,3])
    C0024517 (UMLS CUI [1,4])
    EVEC.1
    Item
    1st eigenvector from principal components analysis used as a covariate in adjusted GWAS
    float
    C3846158 (UMLS CUI [1,1])
    C0429865 (UMLS CUI [1,2])
    C4684740 (UMLS CUI [1,3])
    C2350277 (UMLS CUI [1,4])
    EVEC.2
    Item
    2nd eigenvector from principal components analysis used as a covariate in adjusted GWAS
    float
    C3846158 (UMLS CUI [1,1])
    C0429865 (UMLS CUI [1,2])
    C4684740 (UMLS CUI [1,3])
    C2350277 (UMLS CUI [1,4])
    EVEC.3
    Item
    3rd eigenvector from principal components analysis used as a covariate in adjusted GWAS
    float
    C3846158 (UMLS CUI [1,1])
    C0429865 (UMLS CUI [1,2])
    C4684740 (UMLS CUI [1,3])
    C2350277 (UMLS CUI [1,4])
    EVEC.4
    Item
    4th eigenvector from principal components analysis used as a covariate in adjusted GWAS
    float
    C3846158 (UMLS CUI [1,1])
    C0429865 (UMLS CUI [1,2])
    C4684740 (UMLS CUI [1,3])
    C2350277 (UMLS CUI [1,4])

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