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ID

45572

Description

Principal Investigator: Glen Weiss, MD, Translational Genomics Research Institute, Phoenix, AZ, USA MeSH: Carcinoma https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000657 In this study, we used NGS to identify somatic events in advanced stage cancer patients to demonstrate the feasibility for using this approach to improve patient treatment.

Link

dbGaP study = phs000657

Keywords

  1. 1/24/23 1/24/23 - Dr. Christian Niklas
Copyright Holder

Glen Weiss, MD, Translational Genomics Research Institute, Phoenix, AZ, USA

Uploaded on

January 24, 2023

DOI

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License

Creative Commons BY 4.0

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    dbGaP phs000657 NGS in Advanced Cancers

    Subject ID, sample ID, and sample use variables obtained from participants of the "A Pilot Study Using Next Generation Sequencing in Advanced Cancers: Feasibility and Challenges" project.

    pht003493
    Description

    pht003493

    Alias
    UMLS CUI [1,1]
    C3846158 (Other Coding)
    LOINC
    LA4728-7
    Subject ID
    Description

    SUBJECT_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C2348585 (Clinical Trial Subject Unique Identifier)
    Sample ID
    Description

    SAMPLE_ID

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C1299222 (Sample identification number)
    SNOMED
    372274003
    Sample use. WES_SRA: Whole exome sequencing data available through SRA; WGS_SRA: Whole genome sequencing data available through SRA; WTS_SRA: Whole transcriptome sequencing
    Description

    SAMPLE_USE

    Data type

    string

    Alias
    UMLS CUI [1,1]
    C2347026 (Biospecimen)
    UMLS CUI [1,2]
    C1524063 (Use of)
    SNOMED
    260676000

    Similar models

    Subject ID, sample ID, and sample use variables obtained from participants of the "A Pilot Study Using Next Generation Sequencing in Advanced Cancers: Feasibility and Challenges" project.

    Name
    Type
    Description | Question | Decode (Coded Value)
    Data type
    Alias
    Item Group
    pht003493
    C3846158 (UMLS CUI [1,1])
    SUBJECT_ID
    Item
    Subject ID
    string
    C2348585 (UMLS CUI [1,1])
    SAMPLE_ID
    Item
    Sample ID
    string
    C1299222 (UMLS CUI [1,1])
    SAMPLE_USE
    Item
    Sample use. WES_SRA: Whole exome sequencing data available through SRA; WGS_SRA: Whole genome sequencing data available through SRA; WTS_SRA: Whole transcriptome sequencing
    string
    C2347026 (UMLS CUI [1,1])
    C1524063 (UMLS CUI [1,2])

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