ID

45564

Descripción

Principal Investigator: Dharambir Sanghera, PhD, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA MeSH: Diabetes Mellitus, Type 2,Obesity https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000583 The Punjabi Sikh population is a well-defined, carefully collected homogeneous sample from northern India and the US. It has unique characteristics, which are ideal for genetic studies. Sikhs are *strictly* a non-smoking population and about 50% of participants are life-long vegetarians. All subjects included in the genome-wide association studies (GWAS) were recruited from one geographical location. Our population demonstrates a strong familial clustering of type 2 diabetes and related cardio-metabolic disorders that may be genetic and we believe that the contribution of alleles at specific loci are likely to be unique to Punjabi Asians compared to Europeans. Our group first showed that the association of a common variant at rs9939609 in the *FTO* (fat mass and obesity) gene in South Asians was independent of BMI (PMID:18598350) in contrast to Europeans where the association of same variant with T2D is mediated through obesity (PMID:17434869). These findings were later confirmed in an independent sample of South Indians (PMID:19005641), Pakistanis (PMID:21294771), and even East and South Asians in a large meta-analyses study comprising 96,551 individuals (PMID: 22109280). Earlier reported association of *MTNR1B* with fasting glucose concentrations and type 2 diabetes in European GWAS could not be confirmed in our Sikh cohort. On the other hand, our study revealed, for the first time, a significant protective association of another less common variant in *MTNR1B* with fasting glucose levels that was modulated by obesity. Ours was the first report that suggested that the low CETP activity was associated with higher CAD risk (PMID:22143414) in South Asians and that the genetic effects are significantly modulated by environmental factors (alcohol consumption). Our recent GWAS on type 2 diabetes has identified a novel locus at chromosome 13q12 in the *SGCG* gene (p=1.82x10sup-8/sup) associated with type 2 diabetes (PMID:23300278) in Punjabi Sikhs. From these findings, we are optimistic that our resource will provide new insights to gene functions in the diabetic pathway and better help researchers to understand and translate these insights to novel therapeutic treatment and early prevention to T2D that may be important beyond Indians.

Link

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000583

Palabras clave

  1. 13/1/23 13/1/23 - Nelly Zental
Titular de derechos de autor

Dharambir Sanghera, PhD, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA

Subido en

13 de enero de 2023

DOI

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Licencia

Creative Commons BY 4.0

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dbGaP phs000583 Asian Indian Diabetic Heart Study (AIDHS)

Data of TNF-alpha, C-peptide, serum Creatinin and Vitamin D levels - represented by PhenX variables.

pht003295
Descripción

pht003295

Alias
UMLS CUI [1,1]
C3846158
De-identified subject ID
Descripción

SUBJID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Serum creatinine concentration
Descripción

PX141401_Serum_Creatinine_Concentration

Tipo de datos

text

Unidades de medida
  • mg/dL
Alias
UMLS CUI [1,1]
C0201976
mg/dL
Connecting peptide concentration
Descripción

PX141201_C-peptide_Concentration

Tipo de datos

text

Unidades de medida
  • pg/mL
Alias
UMLS CUI [1,1]
C0202100
pg/mL
Tumor Necrosis Alpha concentration
Descripción

PX160201_Tumor_Necrosis_Factor_Alpha_Concentration

Tipo de datos

text

Unidades de medida
  • pg/mL
Alias
UMLS CUI [1,1]
C1168005
pg/mL
Vitamin D concentration
Descripción

PX0501101_Vitamin D_Collection_PicogramsPermilliter

Tipo de datos

text

Unidades de medida
  • nm/mL
Alias
UMLS CUI [1,1]
C0919758
nm/mL

Similar models

Data of TNF-alpha, C-peptide, serum Creatinin and Vitamin D levels - represented by PhenX variables.

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht003295
C3846158 (UMLS CUI [1,1])
SUBJID
Item
De-identified subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
PX141401_Serum_Creatinine_Concentration
Item
Serum creatinine concentration
text
C0201976 (UMLS CUI [1,1])
PX141201_C-peptide_Concentration
Item
Connecting peptide concentration
text
C0202100 (UMLS CUI [1,1])
PX160201_Tumor_Necrosis_Factor_Alpha_Concentration
Item
Tumor Necrosis Alpha concentration
text
C1168005 (UMLS CUI [1,1])
PX0501101_Vitamin D_Collection_PicogramsPermilliter
Item
Vitamin D concentration
text
C0919758 (UMLS CUI [1,1])

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