ID

45564

Descripción

Principal Investigator: Dharambir Sanghera, PhD, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA MeSH: Diabetes Mellitus, Type 2,Obesity https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000583 The Punjabi Sikh population is a well-defined, carefully collected homogeneous sample from northern India and the US. It has unique characteristics, which are ideal for genetic studies. Sikhs are *strictly* a non-smoking population and about 50% of participants are life-long vegetarians. All subjects included in the genome-wide association studies (GWAS) were recruited from one geographical location. Our population demonstrates a strong familial clustering of type 2 diabetes and related cardio-metabolic disorders that may be genetic and we believe that the contribution of alleles at specific loci are likely to be unique to Punjabi Asians compared to Europeans. Our group first showed that the association of a common variant at rs9939609 in the *FTO* (fat mass and obesity) gene in South Asians was independent of BMI (PMID:18598350) in contrast to Europeans where the association of same variant with T2D is mediated through obesity (PMID:17434869). These findings were later confirmed in an independent sample of South Indians (PMID:19005641), Pakistanis (PMID:21294771), and even East and South Asians in a large meta-analyses study comprising 96,551 individuals (PMID: 22109280). Earlier reported association of *MTNR1B* with fasting glucose concentrations and type 2 diabetes in European GWAS could not be confirmed in our Sikh cohort. On the other hand, our study revealed, for the first time, a significant protective association of another less common variant in *MTNR1B* with fasting glucose levels that was modulated by obesity. Ours was the first report that suggested that the low CETP activity was associated with higher CAD risk (PMID:22143414) in South Asians and that the genetic effects are significantly modulated by environmental factors (alcohol consumption). Our recent GWAS on type 2 diabetes has identified a novel locus at chromosome 13q12 in the *SGCG* gene (p=1.82x10sup-8/sup) associated with type 2 diabetes (PMID:23300278) in Punjabi Sikhs. From these findings, we are optimistic that our resource will provide new insights to gene functions in the diabetic pathway and better help researchers to understand and translate these insights to novel therapeutic treatment and early prevention to T2D that may be important beyond Indians.

Link

https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs000583

Palabras clave

  1. 13/1/23 13/1/23 - Nelly Zental
Titular de derechos de autor

Dharambir Sanghera, PhD, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA

Subido en

13 de enero de 2023

DOI

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Licencia

Creative Commons BY 4.0

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dbGaP phs000583 Asian Indian Diabetic Heart Study (AIDHS)

Data include affection status (Normoglycemic/T2-Diabetic), BMI measurements and basic sociodemographic information.

pht003294
Descripción

pht003294

Alias
UMLS CUI [1,1]
C3846158
De-identified Subject ID
Descripción

SUBJID

Tipo de datos

string

Alias
UMLS CUI [1,1]
C4684638
UMLS CUI [1,2]
C2348585
Normoglycemic Control - Type 2 Diabetic
Descripción

C_C

Tipo de datos

text

Alias
UMLS CUI [1,1]
C3532488
UMLS CUI [1,2]
C0009932
UMLS CUI [1,3]
C0580545
Gender of participant
Descripción

SEX

Tipo de datos

text

Alias
UMLS CUI [1,1]
C0079399
Age of participant
Descripción

AGE

Tipo de datos

float

Unidades de medida
  • Years
Alias
UMLS CUI [1,1]
C0001779
Years
Body Mass Index of participant
Descripción

BMI

Tipo de datos

float

Unidades de medida
  • Kg/m2
Alias
UMLS CUI [1,1]
C1305855
Kg/m2

Similar models

Data include affection status (Normoglycemic/T2-Diabetic), BMI measurements and basic sociodemographic information.

Name
Tipo
Description | Question | Decode (Coded Value)
Tipo de datos
Alias
Item Group
pht003294
C3846158 (UMLS CUI [1,1])
SUBJID
Item
De-identified Subject ID
string
C4684638 (UMLS CUI [1,1])
C2348585 (UMLS CUI [1,2])
Item
Normoglycemic Control - Type 2 Diabetic
text
C3532488 (UMLS CUI [1,1])
C0009932 (UMLS CUI [1,2])
C0580545 (UMLS CUI [1,3])
Code List
Normoglycemic Control - Type 2 Diabetic
CL Item
Normoglycemic Control (0)
C0009932 (UMLS CUI [1,1])
C0580545 (UMLS CUI [1,2])
CL Item
Type 2 Diabetic (1)
C3532488 (UMLS CUI [1,1])
Item
Gender of participant
text
C0079399 (UMLS CUI [1,1])
Code List
Gender of participant
CL Item
Unknown (?)
C0439673 (UMLS CUI [1,1])
CL Item
Male (1)
C0086582 (UMLS CUI [1,1])
CL Item
Female (2)
C0086287 (UMLS CUI [1,1])
AGE
Item
Age of participant
float
C0001779 (UMLS CUI [1,1])
BMI
Item
Body Mass Index of participant
float
C1305855 (UMLS CUI [1,1])

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